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The map label for this gene is 94313916

Identifier: 94313916

GI number: 94313916

Start: 1673786

End: 1674931

Strand: Direct

Name: 94313916

Synonym: Rmet_4994

Alternate gene names: NA

Gene position: 1673786-1674931 (Clockwise)

Preceding gene: 94313915

Following gene: 94313917

Centisome position: 64.87

GC content: 65.1

Gene sequence:

>1146_bases
ATGAGGAAGCAGGCTTTCGCGCTGGCGGCTCTCGCCGCGGCCAGTGTCACAGCACACGCGCAATCGAGCGTCACGCTTTA
CGGAGTCATCGACGGGTCGATCGAATACGTCAATCGCGTGGCGTCGTCCGCCGCCACGCCCAACCAGGGCGGCAGCCGCT
TCGGCATGCCCAGCGTGGGCGGCCTGTCGGCGTCGCGCTGGGGCCTGCGCGGCGTCGAGGACCTGGGCGGCGGCAACCAG
GCGCTGTTCGTGCTGGAGTCCGGCTTTCAATGGGACACCGGAGCGCTGCAAAGCGCCCCCTTGTTCAACCGCCAGTCGTA
CCTCGGCATCCAGAACGCCACCGTCGGCAAGTTCTCGTTCGGCCGTCAGTACACGTCGTTCTTCGACGGCATGGCCAACT
TCGCCCCGCTTCGCTTTGCGGCCACCTATGAGCCGGGCATCTGGTGGATGGGCCTGAACTACCGCGAAGACAACATGGTC
AAGTACACGGGCCAGTTCGGACCGTTCCAGGCCGTGGCGCACTTCTCGTTCGGCACCGGCGTGGCCGTGCAGAACGCCAC
CATCCTGCTAGCCAATGGCGGCGCCGGCGAAGTGCCGGGGCACTTCTCCGACAACACCGGCTACGGCGGCTCGCTGATGT
ACCTGAGCAACGGCCTGGGCTTCTCCCTCGCAGCGGACGAATGGCGTCCGGCAGCGGTCACCGGCCAGCCAGGCAAGATG
ACCAAGCTCGGTGCGGCGGCCCTCTACAACACCGGGCCGCTCAAGTTCACGGCCGGCTATCGCTACAACAAGGGAGAGTT
CTCGAACGGCGGCACGCTGCTGCGTGACGACTACTGGTGGGCAGGCGTGAACTATCAGGCCACGCCGGCACTGGGACTGT
CCCTGGCCTACTACTTCGCCAACGTCAAACAGGCCAGCGCGGCAGCTAACACCCCGACAAGCAATCCGCCCAACATGCAC
CAGGTCAGCTTCATCGCCGACTACAACTTCAGCAAGCGCACTGACGTCTATCTGTCGGCCGGCTGGGCGCACAACGGTGG
CCTCAGCTTTGACGGCGCCGCCACGGCCTATGCCTTCAAGTACCCGACCATGACCGGACAGCAGAACATGATCGGGGTGA
CGGTAGGCATCCGGCAGATCTTCTGA

Upstream 100 bases:

>100_bases
GCTGCGCGATCTAATTCGCATCAGCCCACCTCCATGTGCTCCCACGCACCGGCAAACGGTGGGCGATCACAACACAAGAC
CAATACGGAGAAGACAGAGC

Downstream 100 bases:

>100_bases
CCAAAACCCTGTTCCTTGTCTCAGCCCTTGCGGTGGCCGACGGCGGCCACCGTTCTTTTTTTGGGGGCTCTTCGTCGATT
TGCGGGGCCAGGGAGTGACT

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRKQAFALAALAAASVTAHAQSSVTLYGVIDGSIEYVNRVASSAATPNQGGSRFGMPSVGGLSASRWGLRGVEDLGGGNQ
ALFVLESGFQWDTGALQSAPLFNRQSYLGIQNATVGKFSFGRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMV
KYTGQFGPFQAVAHFSFGTGVAVQNATILLANGGAGEVPGHFSDNTGYGGSLMYLSNGLGFSLAADEWRPAAVTGQPGKM
TKLGAAALYNTGPLKFTAGYRYNKGEFSNGGTLLRDDYWWAGVNYQATPALGLSLAYYFANVKQASAAANTPTSNPPNMH
QVSFIADYNFSKRTDVYLSAGWAHNGGLSFDGAATAYAFKYPTMTGQQNMIGVTVGIRQIF

Sequences:

>Translated_381_residues
MRKQAFALAALAAASVTAHAQSSVTLYGVIDGSIEYVNRVASSAATPNQGGSRFGMPSVGGLSASRWGLRGVEDLGGGNQ
ALFVLESGFQWDTGALQSAPLFNRQSYLGIQNATVGKFSFGRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMV
KYTGQFGPFQAVAHFSFGTGVAVQNATILLANGGAGEVPGHFSDNTGYGGSLMYLSNGLGFSLAADEWRPAAVTGQPGKM
TKLGAAALYNTGPLKFTAGYRYNKGEFSNGGTLLRDDYWWAGVNYQATPALGLSLAYYFANVKQASAAANTPTSNPPNMH
QVSFIADYNFSKRTDVYLSAGWAHNGGLSFDGAATAYAFKYPTMTGQQNMIGVTVGIRQIF
>Mature_381_residues
MRKQAFALAALAAASVTAHAQSSVTLYGVIDGSIEYVNRVASSAATPNQGGSRFGMPSVGGLSASRWGLRGVEDLGGGNQ
ALFVLESGFQWDTGALQSAPLFNRQSYLGIQNATVGKFSFGRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMV
KYTGQFGPFQAVAHFSFGTGVAVQNATILLANGGAGEVPGHFSDNTGYGGSLMYLSNGLGFSLAADEWRPAAVTGQPGKM
TKLGAAALYNTGPLKFTAGYRYNKGEFSNGGTLLRDDYWWAGVNYQATPALGLSLAYYFANVKQASAAANTPTSNPPNMH
QVSFIADYNFSKRTDVYLSAGWAHNGGLSFDGAATAYAFKYPTMTGQQNMIGVTVGIRQIF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40571; Mature: 40571

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQAFALAALAAASVTAHAQSSVTLYGVIDGSIEYVNRVASSAATPNQGGSRFGMPSVG
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
GLSASRWGLRGVEDLGGGNQALFVLESGFQWDTGALQSAPLFNRQSYLGIQNATVGKFSF
CCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
GRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMVKYTGQFGPFQAVAHFSFGTG
CCHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCEEEEECCCCCCCEEEEECCCCC
VAVQNATILLANGGAGEVPGHFSDNTGYGGSLMYLSNGLGFSLAADEWRPAAVTGQPGKM
EEEECEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCEEECCCCCCC
TKLGAAALYNTGPLKFTAGYRYNKGEFSNGGTLLRDDYWWAGVNYQATPALGLSLAYYFA
EECCCEEEECCCCEEEEECEEECCCCCCCCCCEEECCEEEECCCEECCCHHHHHHHHHHH
NVKQASAAANTPTSNPPNMHQVSFIADYNFSKRTDVYLSAGWAHNGGLSFDGAATAYAFK
HHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECEECCCCCCCCCCCEEEEEE
YPTMTGQQNMIGVTVGIRQIF
CCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MRKQAFALAALAAASVTAHAQSSVTLYGVIDGSIEYVNRVASSAATPNQGGSRFGMPSVG
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
GLSASRWGLRGVEDLGGGNQALFVLESGFQWDTGALQSAPLFNRQSYLGIQNATVGKFSF
CCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
GRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMVKYTGQFGPFQAVAHFSFGTG
CCHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCEEEEECCCCCCCEEEEECCCCC
VAVQNATILLANGGAGEVPGHFSDNTGYGGSLMYLSNGLGFSLAADEWRPAAVTGQPGKM
EEEECEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCEEECCCCCCC
TKLGAAALYNTGPLKFTAGYRYNKGEFSNGGTLLRDDYWWAGVNYQATPALGLSLAYYFA
EECCCEEEECCCCEEEEECEEECCCCCCCCCCEEECCEEEECCCEECCCHHHHHHHHHHH
NVKQASAAANTPTSNPPNMHQVSFIADYNFSKRTDVYLSAGWAHNGGLSFDGAATAYAFK
HHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECEECCCCCCCCCCCEEEEEE
YPTMTGQQNMIGVTVGIRQIF
CCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]