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The map label for this gene is rcsB [H]

Identifier: 94313887

GI number: 94313887

Start: 1636243

End: 1636887

Strand: Reverse

Name: rcsB [H]

Synonym: Rmet_4965

Alternate gene names: 94313887

Gene position: 1636887-1636243 (Counterclockwise)

Preceding gene: 94313888

Following gene: 94313886

Centisome position: 63.44

GC content: 62.17

Gene sequence:

>645_bases
ATGATTCAGGTACTAATTGCCGACGATCACCCGGTAGTCGTCAATGGCATCCGTAGAGAACTAGGTGACGAGGTTGGGTT
TGAAGTCGTTGGCACGGCGCATAGCTCCACCGAGCTGCTGCGTCTGCTCGACACCACCCAGTGCGATGTGCTGGTGACCG
ACTATTCCATGCCGGGGAGTGCGACTGGCGACGGCTTGCCGATGCTGCAGTTGATTCGCAGGCGCCATCCGGCCGTACGC
ATTGTCGTGATCACGATGCTCGACAATCCCGCCCTGCTGCGGAACATTCAGAAGGCAGGCATCTCGGTGATCCTGAGCAA
GTCCGATCACCTTGGCCATCTCGCCCCCGCGATCCGGGCGGCCTTCGTCGGTATCGCTTATCTGGCGCCTGCGGTGCAGG
CGTTGCTCGGCGATGCCAGCGACGACGGCGGCGCGCCGGAGCCAAAGCTCTCGAAGCGGGAACTGGAGGTCGTGCGCAAA
TGCGCGGCTGGTGTGCCCCTGGTCGAGATCGCCCGGCAGGCCAATCGCAGCAGCAAGACCATCAGCGCCCAGAAGAGCAT
GGCGATGCGCAAGCTGGGTCTGACATCGGATTACGAGCTTTATCAGTACGCCGTCACCCACGGCATGCTTGCGGCCGCCC
AGTAA

Upstream 100 bases:

>100_bases
TATCTCGTAGAACTTCTATTATCTCGACATGGCGACCCGGCCATACAAGGGCAATGTGATCCATATATCTCATTCAATCG
ACCGGGTCCGAAGGGGCAAG

Downstream 100 bases:

>100_bases
TCGGGCCCGGTCATTGCCGCTGCCACCGCCATTGGCGTAATCGCAGCCGGCACGCGGGTCCTCGGACCCGCTCTTTCTCG
CTACTTCTTGCTCCCTCCCG

Product: LuxR family two component transcriptional regulator, DNA binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MIQVLIADDHPVVVNGIRRELGDEVGFEVVGTAHSSTELLRLLDTTQCDVLVTDYSMPGSATGDGLPMLQLIRRRHPAVR
IVVITMLDNPALLRNIQKAGISVILSKSDHLGHLAPAIRAAFVGIAYLAPAVQALLGDASDDGGAPEPKLSKRELEVVRK
CAAGVPLVEIARQANRSSKTISAQKSMAMRKLGLTSDYELYQYAVTHGMLAAAQ

Sequences:

>Translated_214_residues
MIQVLIADDHPVVVNGIRRELGDEVGFEVVGTAHSSTELLRLLDTTQCDVLVTDYSMPGSATGDGLPMLQLIRRRHPAVR
IVVITMLDNPALLRNIQKAGISVILSKSDHLGHLAPAIRAAFVGIAYLAPAVQALLGDASDDGGAPEPKLSKRELEVVRK
CAAGVPLVEIARQANRSSKTISAQKSMAMRKLGLTSDYELYQYAVTHGMLAAAQ
>Mature_214_residues
MIQVLIADDHPVVVNGIRRELGDEVGFEVVGTAHSSTELLRLLDTTQCDVLVTDYSMPGSATGDGLPMLQLIRRRHPAVR
IVVITMLDNPALLRNIQKAGISVILSKSDHLGHLAPAIRAAFVGIAYLAPAVQALLGDASDDGGAPEPKLSKRELEVVRK
CAAGVPLVEIARQANRSSKTISAQKSMAMRKLGLTSDYELYQYAVTHGMLAAAQ

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=202, Percent_Identity=40.5940594059406, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1788222, Length=215, Percent_Identity=33.0232558139535, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1790102, Length=200, Percent_Identity=31, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788712, Length=203, Percent_Identity=26.1083743842365, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1788521, Length=197, Percent_Identity=29.9492385786802, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786747, Length=208, Percent_Identity=24.0384615384615, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22914; Mature: 22914

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVLIADDHPVVVNGIRRELGDEVGFEVVGTAHSSTELLRLLDTTQCDVLVTDYSMPGS
CEEEEEECCCCHHHHHHHHHCCHHCCCEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCC
ATGDGLPMLQLIRRRHPAVRIVVITMLDNPALLRNIQKAGISVILSKSDHLGHLAPAIRA
CCCCCCHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHH
AFVGIAYLAPAVQALLGDASDDGGAPEPKLSKRELEVVRKCAAGVPLVEIARQANRSSKT
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHH
ISAQKSMAMRKLGLTSDYELYQYAVTHGMLAAAQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQVLIADDHPVVVNGIRRELGDEVGFEVVGTAHSSTELLRLLDTTQCDVLVTDYSMPGS
CEEEEEECCCCHHHHHHHHHCCHHCCCEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCC
ATGDGLPMLQLIRRRHPAVRIVVITMLDNPALLRNIQKAGISVILSKSDHLGHLAPAIRA
CCCCCCHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHH
AFVGIAYLAPAVQALLGDASDDGGAPEPKLSKRELEVVRKCAAGVPLVEIARQANRSSKT
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHH
ISAQKSMAMRKLGLTSDYELYQYAVTHGMLAAAQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]