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The map label for this gene is rcsB [C]

Identifier: 94313886

GI number: 94313886

Start: 1635294

End: 1635965

Strand: Reverse

Name: rcsB [C]

Synonym: Rmet_4964

Alternate gene names: 94313886

Gene position: 1635965-1635294 (Counterclockwise)

Preceding gene: 94313887

Following gene: 94313885

Centisome position: 63.41

GC content: 63.24

Gene sequence:

>672_bases
ATGAAGAAAGTCAGGCTATGCATCGCAAGTGATCGACCTGCAGTCTGTCAGGCTCTGGCGCGACGTCTTGAGTCCTTGCC
GTGCATTGAGCTCGTCGGAAACAGCGGGCGTGCCGAGGAGGTTCTCGCAATCACGCAGCGCGCGGGATGCGACGTCGTGC
TTCAGGTCCGGGAGCCGGAATCCGGCCTTGATCAATCCGCACTGTTTCTCCGGCTGGTTGACTCCACGATGGCGCCGCCG
GCAACGCTGGTCGTCCAGGCCGATCTGACGCGCCGGGCCGATGTGTTGACGCTGCTCGGCAGCGGTGTAAAGAACATCGT
CAGTGCGCTGGATGACGCCGATGCCGTGGCGCAGGCGGTATTGATGGCGCACATGGGCATCGGTTCGCTCTCCCCGCGGG
CGATGGACGTGATGTGGGGTTCATGGCGTGCCGCGCCGCGCGCCGTCGACGAGGTTCGCCACAGCGTCGACGAGATTCGC
CACAGCCTTTCCCGGCGCGAACTGGAAGTCCTGCGGCTTTACCTGGCCGGCGTGCCGATCTCGAAGATTGCCCGCGACAC
TGGCCGCAGCGTCAACACGGTCAGCGCGCAGAAGAAGAGTCTGATGCGCAAGATGAATGTGCAAGATCACGTGCAGCTTG
TGGCGATGTCGATCCAGTACGGCCTGGTGTAG

Upstream 100 bases:

>100_bases
CTGCATGCATTGCGCCCAAATTTAATCGTTGCCTTATAGTCCCGGCCGCTCCCGTGAACCAACATGGATGCAGGCAGATA
TTGAATCGGGATAGTAGGAA

Downstream 100 bases:

>100_bases
CACGATGTAGCCTGGCGCGGGCCGTAACGTCCCGCCAGGTTGAAGCGAATGCCAGCCCCGATCGAGGGTTGGCCACCATG
GGTACCAAAGCCCCGGGGAT

Product: LuxR family two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKKVRLCIASDRPAVCQALARRLESLPCIELVGNSGRAEEVLAITQRAGCDVVLQVREPESGLDQSALFLRLVDSTMAPP
ATLVVQADLTRRADVLTLLGSGVKNIVSALDDADAVAQAVLMAHMGIGSLSPRAMDVMWGSWRAAPRAVDEVRHSVDEIR
HSLSRRELEVLRLYLAGVPISKIARDTGRSVNTVSAQKKSLMRKMNVQDHVQLVAMSIQYGLV

Sequences:

>Translated_223_residues
MKKVRLCIASDRPAVCQALARRLESLPCIELVGNSGRAEEVLAITQRAGCDVVLQVREPESGLDQSALFLRLVDSTMAPP
ATLVVQADLTRRADVLTLLGSGVKNIVSALDDADAVAQAVLMAHMGIGSLSPRAMDVMWGSWRAAPRAVDEVRHSVDEIR
HSLSRRELEVLRLYLAGVPISKIARDTGRSVNTVSAQKKSLMRKMNVQDHVQLVAMSIQYGLV
>Mature_223_residues
MKKVRLCIASDRPAVCQALARRLESLPCIELVGNSGRAEEVLAITQRAGCDVVLQVREPESGLDQSALFLRLVDSTMAPP
ATLVVQADLTRRADVLTLLGSGVKNIVSALDDADAVAQAVLMAHMGIGSLSPRAMDVMWGSWRAAPRAVDEVRHSVDEIR
HSLSRRELEVLRLYLAGVPISKIARDTGRSVNTVSAQKKSLMRKMNVQDHVQLVAMSIQYGLV

Specific function: Rcsb Is A Member Of The Two-Component Regulatory System Rcsb/Rcsc, Which Regulates The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. Rcsb Acts As The Effector. Additional Control Is Provided By The Dependence On The Alternate Sigma Facto

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24246; Mature: 24246

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVRLCIASDRPAVCQALARRLESLPCIELVGNSGRAEEVLAITQRAGCDVVLQVREPE
CCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCEEEEEEECCC
SGLDQSALFLRLVDSTMAPPATLVVQADLTRRADVLTLLGSGVKNIVSALDDADAVAQAV
CCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH
LMAHMGIGSLSPRAMDVMWGSWRAAPRAVDEVRHSVDEIRHSLSRRELEVLRLYLAGVPI
HHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SKIARDTGRSVNTVSAQKKSLMRKMNVQDHVQLVAMSIQYGLV
HHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVRLCIASDRPAVCQALARRLESLPCIELVGNSGRAEEVLAITQRAGCDVVLQVREPE
CCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCEEEEEEECCC
SGLDQSALFLRLVDSTMAPPATLVVQADLTRRADVLTLLGSGVKNIVSALDDADAVAQAV
CCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH
LMAHMGIGSLSPRAMDVMWGSWRAAPRAVDEVRHSVDEIRHSLSRRELEVLRLYLAGVPI
HHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SKIARDTGRSVNTVSAQKKSLMRKMNVQDHVQLVAMSIQYGLV
HHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA