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The map label for this gene is appB [H]

Identifier: 94313878

GI number: 94313878

Start: 1622655

End: 1623662

Strand: Direct

Name: appB [H]

Synonym: Rmet_4956

Alternate gene names: 94313878

Gene position: 1622655-1623662 (Clockwise)

Preceding gene: 94313877

Following gene: 94313879

Centisome position: 62.89

GC content: 65.67

Gene sequence:

>1008_bases
ATGGGTATCGATCTCTCTCTGCTCTGGATTCTGATCATCTTCTTCGGCGTGATGATGTACGTCGTGATGGACGGCTTCGA
TCTCGGCATCGGCATCCTGTTTCCGTTCGTGCCCGCCCGGCATGACCGCGATGTGATGATGAACACGGTGGCGCCCGTCT
GGGACGGCAACGAGACCTGGCTGGTGCTGGGCGGCGCGGGCCTGCTGGCGGCGTTCCCGCTGGCCTACTCCGTGGTCCTG
TCCGCGCTCTACCTGCCGATCGTTCTGATGCTGCTGGGGCTGATCTTTCGTGGCGTGGCGTTCGAATTCCGCTTCAAGGC
CAACGACCGCGAACGCCCGGTATGGGATCTGTCGTTCATGGGCGGATCACTGGTGGCCGCGTTCTTCCAGGGGGTGGCGC
TGGGGGCCTACGTCGATGGCCTGCCCGTCAAGGACGGCGCCTTCGTGGGCAGCCCCATGGGATGGCTCGCCCCGTTCCCG
CTGTTCTGCGGCGTCGGCGTGGTCGTCGCCTACACGCTGCTGGGGGGCACGTGGCTGATCCTGAAGACCGAGGGCCCGCT
GCACGACCGGATGAAAGCCCTGACGTCCCGGCTGGTGTGGGCGCTGCTCGCGATCATCGCGGTCATCAGCATCTGGACGC
CGATTGCCCAGCCACGCATCGCCGAACGCTGGTTCAGCCTGCCCAACCTCTTCTGGTTCGCGCCGGTCCCCCTGCTTGTG
CTGCTGTGCGCCGTGCTCCTGCTGCGTGCCTTGCGCCGGGACACCCATGCGCAACCGTTCCTCTTCACGCTCGGGCTGGT
TTTCCTGGGATACAGCGGCCTGGCCATCAGTGTGTGGCCCAACATCGTGCCGCCATCGGTCTCGATCTGGGCCGCCGCCG
CGCCGCCGCAAAGCCAGGGCTTCGCGCTGGTCGGCGCGCTGTTCGTGATTCCGTTCATCCTGATGTACACGGTGTGGTCC
TACTACGTGTTCCGCGGCAAGGTCCGCGTCGGCGATGGCTACCACTAG

Upstream 100 bases:

>100_bases
TCCGATGCCGAACCGCCAACGGACCACAAACCCGCGCGACCGCTATCGGCCATCAACGACGACACGCGCCTGAACCCCGC
GGAAGCAAGGAGCTGACATC

Downstream 100 bases:

>100_bases
GAGACCCGACATGTCGCACTTACCTGACTGGGCGCGCCGGACTGGCTGGCTTCTGGTCATCTGGACCTGCAGCGTGGCCG
GGCTGGGCGTGGCAGCCCTG

Product: cytochrome d ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome bd-II oxidase subunit II [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MGIDLSLLWILIIFFGVMMYVVMDGFDLGIGILFPFVPARHDRDVMMNTVAPVWDGNETWLVLGGAGLLAAFPLAYSVVL
SALYLPIVLMLLGLIFRGVAFEFRFKANDRERPVWDLSFMGGSLVAAFFQGVALGAYVDGLPVKDGAFVGSPMGWLAPFP
LFCGVGVVVAYTLLGGTWLILKTEGPLHDRMKALTSRLVWALLAIIAVISIWTPIAQPRIAERWFSLPNLFWFAPVPLLV
LLCAVLLLRALRRDTHAQPFLFTLGLVFLGYSGLAISVWPNIVPPSVSIWAAAAPPQSQGFALVGALFVIPFILMYTVWS
YYVFRGKVRVGDGYH

Sequences:

>Translated_335_residues
MGIDLSLLWILIIFFGVMMYVVMDGFDLGIGILFPFVPARHDRDVMMNTVAPVWDGNETWLVLGGAGLLAAFPLAYSVVL
SALYLPIVLMLLGLIFRGVAFEFRFKANDRERPVWDLSFMGGSLVAAFFQGVALGAYVDGLPVKDGAFVGSPMGWLAPFP
LFCGVGVVVAYTLLGGTWLILKTEGPLHDRMKALTSRLVWALLAIIAVISIWTPIAQPRIAERWFSLPNLFWFAPVPLLV
LLCAVLLLRALRRDTHAQPFLFTLGLVFLGYSGLAISVWPNIVPPSVSIWAAAAPPQSQGFALVGALFVIPFILMYTVWS
YYVFRGKVRVGDGYH
>Mature_334_residues
GIDLSLLWILIIFFGVMMYVVMDGFDLGIGILFPFVPARHDRDVMMNTVAPVWDGNETWLVLGGAGLLAAFPLAYSVVLS
ALYLPIVLMLLGLIFRGVAFEFRFKANDRERPVWDLSFMGGSLVAAFFQGVALGAYVDGLPVKDGAFVGSPMGWLAPFPL
FCGVGVVVAYTLLGGTWLILKTEGPLHDRMKALTSRLVWALLAIIAVISIWTPIAQPRIAERWFSLPNLFWFAPVPLLVL
LCAVLLLRALRRDTHAQPFLFTLGLVFLGYSGLAISVWPNIVPPSVSIWAAAAPPQSQGFALVGALFVIPFILMYTVWSY
YVFRGKVRVGDGYH

Specific function: Cytochrome oxidase subunit [H]

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli CydB [H]

Homologues:

Organism=Escherichia coli, GI1787213, Length=361, Percent_Identity=32.6869806094183, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI1786954, Length=375, Percent_Identity=29.6, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 36857; Mature: 36725

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIDLSLLWILIIFFGVMMYVVMDGFDLGIGILFPFVPARHDRDVMMNTVAPVWDGNETW
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEE
LVLGGAGLLAAFPLAYSVVLSALYLPIVLMLLGLIFRGVAFEFRFKANDRERPVWDLSFM
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEHHHC
GGSLVAAFFQGVALGAYVDGLPVKDGAFVGSPMGWLAPFPLFCGVGVVVAYTLLGGTWLI
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEE
LKTEGPLHDRMKALTSRLVWALLAIIAVISIWTPIAQPRIAERWFSLPNLFWFAPVPLLV
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
LLCAVLLLRALRRDTHAQPFLFTLGLVFLGYSGLAISVWPNIVPPSVSIWAAAAPPQSQG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCC
FALVGALFVIPFILMYTVWSYYVFRGKVRVGDGYH
HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC
>Mature Secondary Structure 
GIDLSLLWILIIFFGVMMYVVMDGFDLGIGILFPFVPARHDRDVMMNTVAPVWDGNETW
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEE
LVLGGAGLLAAFPLAYSVVLSALYLPIVLMLLGLIFRGVAFEFRFKANDRERPVWDLSFM
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEHHHC
GGSLVAAFFQGVALGAYVDGLPVKDGAFVGSPMGWLAPFPLFCGVGVVVAYTLLGGTWLI
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEE
LKTEGPLHDRMKALTSRLVWALLAIIAVISIWTPIAQPRIAERWFSLPNLFWFAPVPLLV
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
LLCAVLLLRALRRDTHAQPFLFTLGLVFLGYSGLAISVWPNIVPPSVSIWAAAAPPQSQG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCC
FALVGALFVIPFILMYTVWSYYVFRGKVRVGDGYH
HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658595; 8905232; 9278503; 8626304 [H]