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The map label for this gene is appC [H]

Identifier: 94313877

GI number: 94313877

Start: 1621217

End: 1622650

Strand: Direct

Name: appC [H]

Synonym: Rmet_4955

Alternate gene names: 94313877

Gene position: 1621217-1622650 (Clockwise)

Preceding gene: 94313872

Following gene: 94313878

Centisome position: 62.84

GC content: 62.9

Gene sequence:

>1434_bases
ATGTCTGCATTCGAAGCCCTTGATCTGGCGCGGTTTCAGTTTGGCTTCACCGTCTCGTTCCACATCATTTTTCCGGCCAT
CACGATCGGGATGGCGTCCTACCTTGCCGTGCTGGAAGGGTGCTGGCTACGCACCAGGAACACCGTCTATCGCGACCTCT
ATCATTTCTGGTCCAAGATCTTCGCGCTGAACTTCGGCATGGGCGTGGTCTCCGGACTGGTGATGGCCTACCAGTTCGGT
ACCAACTGGAGTTTCTTCTCCGAGTTCGCGGGCAGCATCACCGGCCCCCTGCTGGCGTACGAGGTGCTGACGGCCTTCTT
CCTCGAAGCGGGCTTCCTCGGCGTCATGCTGTTTGGCTGGAAGCGGGTCGGCCCGGGGCTGCACTTCTTCGCCACGCTGA
TGGTGGCACTGGGCACGCTGATCTCGGCCACGTGGATTCTGGCGTCCAATAGCTGGATGCAGACCCCGCAGGGATTCGAG
ATCGTCGATGGCCGCGTGGTGCCGACCGACTGGCTCGCCGTGATCTTCAATCCGTCGTTCCCCTATCGCCTGGTGCATAT
GAGCATCGCGGCCTTCCTCTCCACTGCGCTGTTCGTCGCTGCATCGGCCGCATGGCATCTGCTGCGCGGCAACGACAATC
CGGCCATCCGCAAGATGCTGTCGATGGCGATGGGAATGCTACTGATCGTCGCCCCCATCCAGGCCGTGGTGGGTGACATG
CACGGCCTGAACACGCTCGAACATCAGCCCGCGAAGATCGCCGCGCTGGAAGGCCATTGGGAGTCGCACGGCGACGAGCC
GCTGCCGTTGCTGGTATTCGGCTGGCCGGATATGGAGCGCGAGGAAACACGCTTCGCAGTCGGCATTCCTCGCTTGGGCA
GCCTGATCCTGACGCACACGCTGGACGGGCAAATCAAGGGCCTGAAATCCTTCCCGCCTCAAGACCGACCTAATGCCGCG
ATCCTGTTCTGGAGCTTCCGTGTGATGGTTGGCCTGGGCATGCTGATGATCCTGCTCGGCCTCTGGAGCCAATGGCTGCG
CTGGCGCGGGCGGCTGTATGAACATCGCGGCTTCCTGCGCATGGCGCTCTGGATGGGTCCCACAGGATTGGTCGCCCTGC
TCGCCGGGTGGTTCACCACGGAGATCGGCCGCCAGCCCTGGGTGGTGTATGGCCTGATGCGGACGGCCGATGCCGCGACG
CCGCACAGCGGCACGCAGCTGACGATCTCGCTGGCGCTGTTCGTCATTACGTACTTCTTCGTCTTCGGCGTGGGCATTGC
CTACATGTTGCGGCTGGTACGCAAGGGGCCGAAGCCGTCCGAGGGCGACGTGTTCGAATCCGATGCCGAACCGCCAACGG
ACCACAAACCCGCGCGACCGCTATCGGCCATCAACGACGACACGCGCCTGAACCCCGCGGAAGCAAGGAGCTGA

Upstream 100 bases:

>100_bases
ACAGTTTATCACTGTATGGAGTATTTGCCACGGGCTCACGGTGTCGCAAGCCGCCAGACAGGCGAGGCGCGGATTGGGAT
GAGCCCAGGAGAATTTGTCC

Downstream 100 bases:

>100_bases
CATCATGGGTATCGATCTCTCTCTGCTCTGGATTCTGATCATCTTCTTCGGCGTGATGATGTACGTCGTGATGGACGGCT
TCGATCTCGGCATCGGCATC

Product: cytochrome bd ubiquinol oxidase subunit I

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MSAFEALDLARFQFGFTVSFHIIFPAITIGMASYLAVLEGCWLRTRNTVYRDLYHFWSKIFALNFGMGVVSGLVMAYQFG
TNWSFFSEFAGSITGPLLAYEVLTAFFLEAGFLGVMLFGWKRVGPGLHFFATLMVALGTLISATWILASNSWMQTPQGFE
IVDGRVVPTDWLAVIFNPSFPYRLVHMSIAAFLSTALFVAASAAWHLLRGNDNPAIRKMLSMAMGMLLIVAPIQAVVGDM
HGLNTLEHQPAKIAALEGHWESHGDEPLPLLVFGWPDMEREETRFAVGIPRLGSLILTHTLDGQIKGLKSFPPQDRPNAA
ILFWSFRVMVGLGMLMILLGLWSQWLRWRGRLYEHRGFLRMALWMGPTGLVALLAGWFTTEIGRQPWVVYGLMRTADAAT
PHSGTQLTISLALFVITYFFVFGVGIAYMLRLVRKGPKPSEGDVFESDAEPPTDHKPARPLSAINDDTRLNPAEARS

Sequences:

>Translated_477_residues
MSAFEALDLARFQFGFTVSFHIIFPAITIGMASYLAVLEGCWLRTRNTVYRDLYHFWSKIFALNFGMGVVSGLVMAYQFG
TNWSFFSEFAGSITGPLLAYEVLTAFFLEAGFLGVMLFGWKRVGPGLHFFATLMVALGTLISATWILASNSWMQTPQGFE
IVDGRVVPTDWLAVIFNPSFPYRLVHMSIAAFLSTALFVAASAAWHLLRGNDNPAIRKMLSMAMGMLLIVAPIQAVVGDM
HGLNTLEHQPAKIAALEGHWESHGDEPLPLLVFGWPDMEREETRFAVGIPRLGSLILTHTLDGQIKGLKSFPPQDRPNAA
ILFWSFRVMVGLGMLMILLGLWSQWLRWRGRLYEHRGFLRMALWMGPTGLVALLAGWFTTEIGRQPWVVYGLMRTADAAT
PHSGTQLTISLALFVITYFFVFGVGIAYMLRLVRKGPKPSEGDVFESDAEPPTDHKPARPLSAINDDTRLNPAEARS
>Mature_476_residues
SAFEALDLARFQFGFTVSFHIIFPAITIGMASYLAVLEGCWLRTRNTVYRDLYHFWSKIFALNFGMGVVSGLVMAYQFGT
NWSFFSEFAGSITGPLLAYEVLTAFFLEAGFLGVMLFGWKRVGPGLHFFATLMVALGTLISATWILASNSWMQTPQGFEI
VDGRVVPTDWLAVIFNPSFPYRLVHMSIAAFLSTALFVAASAAWHLLRGNDNPAIRKMLSMAMGMLLIVAPIQAVVGDMH
GLNTLEHQPAKIAALEGHWESHGDEPLPLLVFGWPDMEREETRFAVGIPRLGSLILTHTLDGQIKGLKSFPPQDRPNAAI
LFWSFRVMVGLGMLMILLGLWSQWLRWRGRLYEHRGFLRMALWMGPTGLVALLAGWFTTEIGRQPWVVYGLMRTADAATP
HSGTQLTISLALFVITYFFVFGVGIAYMLRLVRKGPKPSEGDVFESDAEPPTDHKPARPLSAINDDTRLNPAEARS

Specific function: Cytochrome Oxidase Subunit. [C]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787212, Length=520, Percent_Identity=32.8846153846154, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI87081779, Length=524, Percent_Identity=30.7251908396947, Blast_Score=252, Evalue=4e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 53118; Mature: 52987

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFEALDLARFQFGFTVSFHIIFPAITIGMASYLAVLEGCWLRTRNTVYRDLYHFWSKI
CCHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALNFGMGVVSGLVMAYQFGTNWSFFSEFAGSITGPLLAYEVLTAFFLEAGFLGVMLFGW
HHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRVGPGLHFFATLMVALGTLISATWILASNSWMQTPQGFEIVDGRVVPTDWLAVIFNPSF
HHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEECCEECCCCEEEEEECCCC
PYRLVHMSIAAFLSTALFVAASAAWHLLRGNDNPAIRKMLSMAMGMLLIVAPIQAVVGDM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGLNTLEHQPAKIAALEGHWESHGDEPLPLLVFGWPDMEREETRFAVGIPRLGSLILTHT
HCCCCCCCCCCEEEEEECCHHCCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHCC
LDGQIKGLKSFPPQDRPNAAILFWSFRVMVGLGMLMILLGLWSQWLRWRGRLYEHRGFLR
CCCHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
MALWMGPTGLVALLAGWFTTEIGRQPWVVYGLMRTADAATPHSGTQLTISLALFVITYFF
HHHHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
VFGVGIAYMLRLVRKGPKPSEGDVFESDAEPPTDHKPARPLSAINDDTRLNPAEARS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCC
>Mature Secondary Structure 
SAFEALDLARFQFGFTVSFHIIFPAITIGMASYLAVLEGCWLRTRNTVYRDLYHFWSKI
CHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALNFGMGVVSGLVMAYQFGTNWSFFSEFAGSITGPLLAYEVLTAFFLEAGFLGVMLFGW
HHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRVGPGLHFFATLMVALGTLISATWILASNSWMQTPQGFEIVDGRVVPTDWLAVIFNPSF
HHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEECCEECCCCEEEEEECCCC
PYRLVHMSIAAFLSTALFVAASAAWHLLRGNDNPAIRKMLSMAMGMLLIVAPIQAVVGDM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGLNTLEHQPAKIAALEGHWESHGDEPLPLLVFGWPDMEREETRFAVGIPRLGSLILTHT
HCCCCCCCCCCEEEEEECCHHCCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHCC
LDGQIKGLKSFPPQDRPNAAILFWSFRVMVGLGMLMILLGLWSQWLRWRGRLYEHRGFLR
CCCHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
MALWMGPTGLVALLAGWFTTEIGRQPWVVYGLMRTADAATPHSGTQLTISLALFVITYFF
HHHHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
VFGVGIAYMLRLVRKGPKPSEGDVFESDAEPPTDHKPARPLSAINDDTRLNPAEARS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]