| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313822
Identifier: 94313822
GI number: 94313822
Start: 1563696
End: 1564013
Strand: Direct
Name: 94313822
Synonym: Rmet_4900
Alternate gene names: NA
Gene position: 1563696-1564013 (Clockwise)
Preceding gene: 94313821
Following gene: 94313823
Centisome position: 60.61
GC content: 61.95
Gene sequence:
>318_bases ATGAGTAGCATAATGAGCACAGCCTTACAGAGCGAACTAGAATCAGCCCGTCGTGCCGCCGGCGTCAGCCAACAGGAACT CGCGTCACGCGCAGGCCTGTCGCGGATGACCGTCCAGCGCACGGAAAGCCACGAAATCGATCCCAGGCTGTCCACCGTCA TCGAAATGGCGCGCGCCCTGGGCATGGACGTGATGCTTGTGCCAACGGTGCTGCGGCCAGATCTCGAGAATTTCGTTCGC GCCGGAGGCAAGTATCTCGCCCAACCTCCGGGCGGCGATGCCCCACCGTCGGTCGTCGACACCTTGATCGCGAAATGA
Upstream 100 bases:
>100_bases TCAGTTAATGATCATTTTGACCAAAATGATGATTAAGATACTCATCTCACCTTGAAGAACACGCGGCAACTTGCTACTCT TTCTATGCATTCATGCATAA
Downstream 100 bases:
>100_bases CCACGTCGATCCGCTACCTGCGCCTGTTTCTCTATACGGCTACCGGGCGCCGTGGCATCGGCTACCTGTCCCAGTATGGC GACATCCTCCGGATCTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSSIMSTALQSELESARRAAGVSQQELASRAGLSRMTVQRTESHEIDPRLSTVIEMARALGMDVMLVPTVLRPDLENFVR AGGKYLAQPPGGDAPPSVVDTLIAK
Sequences:
>Translated_105_residues MSSIMSTALQSELESARRAAGVSQQELASRAGLSRMTVQRTESHEIDPRLSTVIEMARALGMDVMLVPTVLRPDLENFVR AGGKYLAQPPGGDAPPSVVDTLIAK >Mature_104_residues SSIMSTALQSELESARRAAGVSQQELASRAGLSRMTVQRTESHEIDPRLSTVIEMARALGMDVMLVPTVLRPDLENFVRA GGKYLAQPPGGDAPPSVVDTLIAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11235; Mature: 11104
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIMSTALQSELESARRAAGVSQQELASRAGLSRMTVQRTESHEIDPRLSTVIEMARAL CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHH GMDVMLVPTVLRPDLENFVRAGGKYLAQPPGGDAPPSVVDTLIAK CCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure SSIMSTALQSELESARRAAGVSQQELASRAGLSRMTVQRTESHEIDPRLSTVIEMARAL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHH GMDVMLVPTVLRPDLENFVRAGGKYLAQPPGGDAPPSVVDTLIAK CCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA