Click here to switch to the map view.

The map label for this gene is 94313818

Identifier: 94313818

GI number: 94313818

Start: 1560845

End: 1561639

Strand: Reverse

Name: 94313818

Synonym: Rmet_4896

Alternate gene names: NA

Gene position: 1561639-1560845 (Counterclockwise)

Preceding gene: 94313824

Following gene: 94313816

Centisome position: 60.53

GC content: 60.88

Gene sequence:

>795_bases
ATGTGCAAACATTGCGGTCGTCTGAATGACTTCGTCGCCAAGCACATGCTGTCCAGCCAATTCGTCAGCCGCGTAACCCT
GCTTCGGGACAAGGTTCCGGGCTTCGATCGCTATCCCTTCTCGTTGCCAGCCGTGCGCGAGCTGGAGACGCTCGATTTGC
ACCCTCGCGTGACTTTCCTGGTTGGCGAAAACGGTTCCGGAAAGTCGACGCTGCTGGAAGGGATTGCGGTGGCGCTCGGC
TTCAATGCCGAAGGTGGCAGTCGCAACTTCAGTTTCGCCACACGCGCGTCGCATTCGGATCTTCACGAATACCTGCGCAT
CGCCAAAGGCGTCCGCCGGCCGAGCACGGGCTATTTCCTGCGCGCGGAGAGCTTCTACAACGTTGCGACGGAGATTGAAC
GGCTTGATGCGGAACCCGGGCTAGGCGCGCCGGTGATCAACTCGTATGGTGGCCACTCATTGCACGAGCAGTCACATGGG
GAGGCTTTCCTGACGCTGCTGACCGAGCGTTTCCAGGGGAAGGGGCTCTATATCCTCGACGAGCCCGAGGCTGCGCTATC
GCCGGCAAGGCAGTTGGCGGTGATTTCGCGGCTGCACGACTTGGTGCGGGAGGGATCGCAGTTTGTGATCGCCACGCACT
CGCCCATCCTGATGGCTTATCCCGACGCATGCATCTACCAGTGCTCGGCGCGCGGCATCGAGCCGATCGCCTATCAGGAC
ACGGAGCACTACCAGATCACGCGTGACTTTCTGGTCGACCCGGAGCGGATGCTCCGGGTGTTGATGGAAGACTGA

Upstream 100 bases:

>100_bases
GGCGTTCAACCAGCTCATCCAGATTGAAATGTGCAATTAACGGCCAAGAGGCAGTTCCATCAGCCTATGAATTGGCCAGC
AGATAAGGGGGCGGGGCAAG

Downstream 100 bases:

>100_bases
AGGAAGGGCCCCAGCTTACTTGGCTTAGGCTGCCAGCGCTTCGATGGCGGCCTTGCCAACGTGGCCCTGCGGCTGCATCG
TGCCTTGTTCGCGGTAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: SMC Domain-Containing Protein; ABC Transporter; SMC Domain Protein; ATPase; Aaa ATPase; RecF/RecN/SMC; SMC Protein-Like Protein; ABC Transport System ATPase Component; ABC-Type Antimicrobial Peptide Transport System Protein; LOW QUALITY PROTEIN ABC Transporter

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MCKHCGRLNDFVAKHMLSSQFVSRVTLLRDKVPGFDRYPFSLPAVRELETLDLHPRVTFLVGENGSGKSTLLEGIAVALG
FNAEGGSRNFSFATRASHSDLHEYLRIAKGVRRPSTGYFLRAESFYNVATEIERLDAEPGLGAPVINSYGGHSLHEQSHG
EAFLTLLTERFQGKGLYILDEPEAALSPARQLAVISRLHDLVREGSQFVIATHSPILMAYPDACIYQCSARGIEPIAYQD
TEHYQITRDFLVDPERMLRVLMED

Sequences:

>Translated_264_residues
MCKHCGRLNDFVAKHMLSSQFVSRVTLLRDKVPGFDRYPFSLPAVRELETLDLHPRVTFLVGENGSGKSTLLEGIAVALG
FNAEGGSRNFSFATRASHSDLHEYLRIAKGVRRPSTGYFLRAESFYNVATEIERLDAEPGLGAPVINSYGGHSLHEQSHG
EAFLTLLTERFQGKGLYILDEPEAALSPARQLAVISRLHDLVREGSQFVIATHSPILMAYPDACIYQCSARGIEPIAYQD
TEHYQITRDFLVDPERMLRVLMED
>Mature_264_residues
MCKHCGRLNDFVAKHMLSSQFVSRVTLLRDKVPGFDRYPFSLPAVRELETLDLHPRVTFLVGENGSGKSTLLEGIAVALG
FNAEGGSRNFSFATRASHSDLHEYLRIAKGVRRPSTGYFLRAESFYNVATEIERLDAEPGLGAPVINSYGGHSLHEQSHG
EAFLTLLTERFQGKGLYILDEPEAALSPARQLAVISRLHDLVREGSQFVIATHSPILMAYPDACIYQCSARGIEPIAYQD
TEHYQITRDFLVDPERMLRVLMED

Specific function: Unknown

COG id: COG3910

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29499; Mature: 29499

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKHCGRLNDFVAKHMLSSQFVSRVTLLRDKVPGFDRYPFSLPAVRELETLDLHPRVTFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCEEEE
VGENGSGKSTLLEGIAVALGFNAEGGSRNFSFATRASHSDLHEYLRIAKGVRRPSTGYFL
EECCCCCHHHHHHHHHHHEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCEEE
RAESFYNVATEIERLDAEPGLGAPVINSYGGHSLHEQSHGEAFLTLLTERFQGKGLYILD
ECHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHCCCHHHHHHHHHHHCCCCEEEEE
EPEAALSPARQLAVISRLHDLVREGSQFVIATHSPILMAYPDACIYQCSARGIEPIAYQD
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCHHHHHHHCCCCCCEEECC
TEHYQITRDFLVDPERMLRVLMED
CCCEEEHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MCKHCGRLNDFVAKHMLSSQFVSRVTLLRDKVPGFDRYPFSLPAVRELETLDLHPRVTFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCEEEE
VGENGSGKSTLLEGIAVALGFNAEGGSRNFSFATRASHSDLHEYLRIAKGVRRPSTGYFL
EECCCCCHHHHHHHHHHHEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCEEE
RAESFYNVATEIERLDAEPGLGAPVINSYGGHSLHEQSHGEAFLTLLTERFQGKGLYILD
ECHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHCCCHHHHHHHHHHHCCCCEEEEE
EPEAALSPARQLAVISRLHDLVREGSQFVIATHSPILMAYPDACIYQCSARGIEPIAYQD
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCHHHHHHHCCCCCCEEECC
TEHYQITRDFLVDPERMLRVLMED
CCCEEEHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA