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The map label for this gene is pvdQ [H]

Identifier: 94313782

GI number: 94313782

Start: 1518638

End: 1521052

Strand: Reverse

Name: pvdQ [H]

Synonym: Rmet_4860

Alternate gene names: 94313782

Gene position: 1521052-1518638 (Counterclockwise)

Preceding gene: 94313783

Following gene: 94313781

Centisome position: 58.95

GC content: 66.34

Gene sequence:

>2415_bases
ATGACCCCACGCATTGCGCGCGGCGCGGTCGTGCTTGGCACGGCTACGCTGGCGGCTGCGGCCTTGAGCGGTTGCGCCAC
TGGCAACGGTAACTGGAGCGAGCAGGGCCTTAGCGCCGAAATCCGCCGCACGTCCTACGGCATTCCCCACATCCGCGCCA
ACGACTACGCCAGCGTCGCCTTCGGCATGGCGTACGCCTATGCGCAGGACAACGTCTGCCTGATGGCCAGCCAGGTGGTG
ACGGTCAGCGGCGAGCGTTCGGCGACGTTCGGGCCGGACGGCACCACCGAGGTGTCCTTCAAGCCGATGCGCAATGCGGA
CGCCGATGCGTTCTTCCGCGCCATTCTCGACGACGATGCCCTGCAGGCCAGCGCGGCAAGGCAATCGCCCGAAGCGCATG
AACTGCTGCGTGGCTATATCGCCGGCTACAACCGTTACCTGCGCGATACGCCGCCGTCGAAGCGCCCGGCCGCCTGCCGC
GATGCGGCGTGGGTGCGCCCGATCACAGCACTCGACATGGCGCGGCTTGCCGAGGAGAAGAGTATCCAGGCCAGCGCCGG
CGCGCTAGCGGCCGGCATCGTCGCGGCTGCGCCGCCACAGGTCACCAAGTCCGCCGCCAAGTCCGCCGCGCTACCCGCAC
GCATCGATATCGCCGCGATCGATTTCGAGGCGGTGAACCGCGACCTGCAGCTGCTCGATCCGCCGATCGGCAGCAATGGC
TGGGCGTTCGGCAAGGCGGCCACGGCAGATGGTTCCGGCCTGCTGCTTGGCAACCCGCACTTCCCCTGGACGACCACCAA
CCGCTTCTATCAGGCGCACCTGACGGTGCCAGGCAAGCTCGACGTCATGGGCGCGTCGATTGCCTCGTTCCCGATCATCA
GCATCGGCTTCAACAAGGACGTGGCCTGGACGCACACCGTTTCCACGGCGCGTCGCTTCACGCTGTTCGAACTGAAGCTG
GCCGATGGGGATCCGACCACCTACCTGATCGACGGCAAGCCGCGCAAGATGACCACCAAGACGGTCAGCTATGCGGCAAA
GCTGGCCGATGGCCGTACCGAGCAGCGTTCGCATACGTTCTACATGACCGAGTACGGTCCGGTCGTGGCCATGCCGCAGG
CAGGGCTGCCGTGGACGGCGCAGAAGGCGTACACGCTGCGGGACGCCAACCAGAACAACACGCGCTCGATCGACACGTGG
CTCGATATCGCGCGGGCGCATAACGTGGGCGAGATCCGCACCGCGATCGGCAACCTGGGCATTCCGTGGGTCAACACGAT
TGCCACCGACCGTTCGGGCCGCGCGATGTTTGCCGACGTCTCGGTCACCCCCAATGTCTCGACCTCGATGCTGGAAAGCT
GCGCGCCGGCCGGCGACGGTGCCGTGTTGGCGAAGAAGCTGATGGCCGGCACGGGTATGGTGCTGCTGGACGGCTCGCGC
GGTGTCTGCAACTGGACTGTCGATCCGGCGTCGCCGGTGCCTGGTCTGGTCCCGCCATCGGCCATGCCGGTGCTGGAACG
CGACGACTTCGTGGCCAACAGCAATGACAGCTCGTGGTTGGCGAATCCCGCGCAGAAGATGGAGGGCTTTTCTCCGGTGC
TCGGGCCGCAGGCGGTGCCGCAGCGCTTGCGCACGCGTGTTGGCTTGATGGAGATCGGCAAGCGCCTGAACGGTGTGGAC
GGCCTGCCGGGCAACCGCTTCGACATCCAGAACCTGCAGACGGTGCTGTTCCGAGATCGCAATCTGGCTGCCGAGCTTGT
GCTGGACGACCTGTTGCGGGCCTGCCGCACCAAGGCTGTTCAGGGCGACAGCGATCTGCGTGACGGGTGCACGGCGCTGG
GCAAGTGGGATCGCCGCAGCAATCTGGAAAGCCGGGCCGCGCCGCTGTTCCGCGAGTTCTGGATGCGCGCGCACGTCATT
CCGAACGTGTACGCCATCGCCTTCAATCCTGCCGATCCGGTTAATACGCCGCGTGGCCTGCGCATGCAGGACGCTACGGT
GAACACGGCCGTGCTGAAGGCGCTCAAGGATGCCGTGGGGGCCATGCGCAAGGCTGGCTTCGCGCTGGATGCCCCGCTTG
GCGAGGTGCAGGCCGCGAAGTCGCCCAACGGCCTGATTCCGCTGCACGGTGGGGAGGAGTACGAGGGCGTGCTGAACAAG
CTCCAGAGCCAGCCGGTGTCGGCCGATGGCCTGAAGGTGTTCTTCGGAACGAGCTATGTGCAGACCGTGGGTTTCGATGC
CAATGGGCCGGTGGCGCAGGCGCTGCTGGTCTACGGCCAGTCGATCGACCCGGCTTCGCCCCATGCCTGGGACCAGATGC
GGCAGTTCTCGGCCAAGCGCTGGATTTCGCTGCCGTTCTCGGAGCAGGCCATCGCGGCGGATCCGCAACTGAGCGTAACC
AAACTGAGCCAGTGA

Upstream 100 bases:

>100_bases
CTGTCATCCCCCGGTTTGCCTGACCATTGCCGGTGGCTTGCGGCGCGCGAAATTGCCCGCCGCAGCCACGACGACAACAA
AGCAAACAGGAGAGAGACAG

Downstream 100 bases:

>100_bases
CGTAGCAGGATGCCGGCGGCATAAGGTGATATGGGGGCGGCCAGGACCGTATCCCATGCCGCCGGCAGGGTCAGCAGGGT
TTTTCAGCGGCGACTACAAT

Product: acyl-homoserine lactone acylase

Products: NA

Alternate protein names: AHL acylase pvdQ; Acyl-HSL acylase pvdQ; Acyl-HSL acylase pvdQ subunit alpha; Acyl-HSL acylase pvdQ subunit beta [H]

Number of amino acids: Translated: 804; Mature: 803

Protein sequence:

>804_residues
MTPRIARGAVVLGTATLAAAALSGCATGNGNWSEQGLSAEIRRTSYGIPHIRANDYASVAFGMAYAYAQDNVCLMASQVV
TVSGERSATFGPDGTTEVSFKPMRNADADAFFRAILDDDALQASAARQSPEAHELLRGYIAGYNRYLRDTPPSKRPAACR
DAAWVRPITALDMARLAEEKSIQASAGALAAGIVAAAPPQVTKSAAKSAALPARIDIAAIDFEAVNRDLQLLDPPIGSNG
WAFGKAATADGSGLLLGNPHFPWTTTNRFYQAHLTVPGKLDVMGASIASFPIISIGFNKDVAWTHTVSTARRFTLFELKL
ADGDPTTYLIDGKPRKMTTKTVSYAAKLADGRTEQRSHTFYMTEYGPVVAMPQAGLPWTAQKAYTLRDANQNNTRSIDTW
LDIARAHNVGEIRTAIGNLGIPWVNTIATDRSGRAMFADVSVTPNVSTSMLESCAPAGDGAVLAKKLMAGTGMVLLDGSR
GVCNWTVDPASPVPGLVPPSAMPVLERDDFVANSNDSSWLANPAQKMEGFSPVLGPQAVPQRLRTRVGLMEIGKRLNGVD
GLPGNRFDIQNLQTVLFRDRNLAAELVLDDLLRACRTKAVQGDSDLRDGCTALGKWDRRSNLESRAAPLFREFWMRAHVI
PNVYAIAFNPADPVNTPRGLRMQDATVNTAVLKALKDAVGAMRKAGFALDAPLGEVQAAKSPNGLIPLHGGEEYEGVLNK
LQSQPVSADGLKVFFGTSYVQTVGFDANGPVAQALLVYGQSIDPASPHAWDQMRQFSAKRWISLPFSEQAIAADPQLSVT
KLSQ

Sequences:

>Translated_804_residues
MTPRIARGAVVLGTATLAAAALSGCATGNGNWSEQGLSAEIRRTSYGIPHIRANDYASVAFGMAYAYAQDNVCLMASQVV
TVSGERSATFGPDGTTEVSFKPMRNADADAFFRAILDDDALQASAARQSPEAHELLRGYIAGYNRYLRDTPPSKRPAACR
DAAWVRPITALDMARLAEEKSIQASAGALAAGIVAAAPPQVTKSAAKSAALPARIDIAAIDFEAVNRDLQLLDPPIGSNG
WAFGKAATADGSGLLLGNPHFPWTTTNRFYQAHLTVPGKLDVMGASIASFPIISIGFNKDVAWTHTVSTARRFTLFELKL
ADGDPTTYLIDGKPRKMTTKTVSYAAKLADGRTEQRSHTFYMTEYGPVVAMPQAGLPWTAQKAYTLRDANQNNTRSIDTW
LDIARAHNVGEIRTAIGNLGIPWVNTIATDRSGRAMFADVSVTPNVSTSMLESCAPAGDGAVLAKKLMAGTGMVLLDGSR
GVCNWTVDPASPVPGLVPPSAMPVLERDDFVANSNDSSWLANPAQKMEGFSPVLGPQAVPQRLRTRVGLMEIGKRLNGVD
GLPGNRFDIQNLQTVLFRDRNLAAELVLDDLLRACRTKAVQGDSDLRDGCTALGKWDRRSNLESRAAPLFREFWMRAHVI
PNVYAIAFNPADPVNTPRGLRMQDATVNTAVLKALKDAVGAMRKAGFALDAPLGEVQAAKSPNGLIPLHGGEEYEGVLNK
LQSQPVSADGLKVFFGTSYVQTVGFDANGPVAQALLVYGQSIDPASPHAWDQMRQFSAKRWISLPFSEQAIAADPQLSVT
KLSQ
>Mature_803_residues
TPRIARGAVVLGTATLAAAALSGCATGNGNWSEQGLSAEIRRTSYGIPHIRANDYASVAFGMAYAYAQDNVCLMASQVVT
VSGERSATFGPDGTTEVSFKPMRNADADAFFRAILDDDALQASAARQSPEAHELLRGYIAGYNRYLRDTPPSKRPAACRD
AAWVRPITALDMARLAEEKSIQASAGALAAGIVAAAPPQVTKSAAKSAALPARIDIAAIDFEAVNRDLQLLDPPIGSNGW
AFGKAATADGSGLLLGNPHFPWTTTNRFYQAHLTVPGKLDVMGASIASFPIISIGFNKDVAWTHTVSTARRFTLFELKLA
DGDPTTYLIDGKPRKMTTKTVSYAAKLADGRTEQRSHTFYMTEYGPVVAMPQAGLPWTAQKAYTLRDANQNNTRSIDTWL
DIARAHNVGEIRTAIGNLGIPWVNTIATDRSGRAMFADVSVTPNVSTSMLESCAPAGDGAVLAKKLMAGTGMVLLDGSRG
VCNWTVDPASPVPGLVPPSAMPVLERDDFVANSNDSSWLANPAQKMEGFSPVLGPQAVPQRLRTRVGLMEIGKRLNGVDG
LPGNRFDIQNLQTVLFRDRNLAAELVLDDLLRACRTKAVQGDSDLRDGCTALGKWDRRSNLESRAAPLFREFWMRAHVIP
NVYAIAFNPADPVNTPRGLRMQDATVNTAVLKALKDAVGAMRKAGFALDAPLGEVQAAKSPNGLIPLHGGEEYEGVLNKL
QSQPVSADGLKVFFGTSYVQTVGFDANGPVAQALLVYGQSIDPASPHAWDQMRQFSAKRWISLPFSEQAIAADPQLSVTK
LSQ

Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of 11 to 14 carbons in length) [H

COG id: COG2366

COG function: function code R; Protein related to penicillin acylase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S45 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002692 [H]

Pfam domain/function: PF01804 Penicil_amidase [H]

EC number: =3.5.1.97 [H]

Molecular weight: Translated: 86081; Mature: 85950

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRIARGAVVLGTATLAAAALSGCATGNGNWSEQGLSAEIRRTSYGIPHIRANDYASVA
CCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHH
FGMAYAYAQDNVCLMASQVVTVSGERSATFGPDGTTEVSFKPMRNADADAFFRAILDDDA
HHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCHH
LQASAARQSPEAHELLRGYIAGYNRYLRDTPPSKRPAACRDAAWVRPITALDMARLAEEK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH
SIQASAGALAAGIVAAAPPQVTKSAAKSAALPARIDIAAIDFEAVNRDLQLLDPPIGSNG
CCHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHCCCCEEECCCCCCCC
WAFGKAATADGSGLLLGNPHFPWTTTNRFYQAHLTVPGKLDVMGASIASFPIISIGFNKD
CCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEEEECCHHHHCCEEEEECCCC
VAWTHTVSTARRFTLFELKLADGDPTTYLIDGKPRKMTTKTVSYAAKLADGRTEQRSHTF
CEEEEEHHHHHEEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEE
YMTEYGPVVAMPQAGLPWTAQKAYTLRDANQNNTRSIDTWLDIARAHNVGEIRTAIGNLG
EEEECCCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCC
IPWVNTIATDRSGRAMFADVSVTPNVSTSMLESCAPAGDGAVLAKKLMAGTGMVLLDGSR
CCCHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCC
GVCNWTVDPASPVPGLVPPSAMPVLERDDFVANSNDSSWLANPAQKMEGFSPVLGPQAVP
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCHHHH
QRLRTRVGLMEIGKRLNGVDGLPGNRFDIQNLQTVLFRDRNLAAELVLDDLLRACRTKAV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
QGDSDLRDGCTALGKWDRRSNLESRAAPLFREFWMRAHVIPNVYAIAFNPADPVNTPRGL
CCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
RMQDATVNTAVLKALKDAVGAMRKAGFALDAPLGEVQAAKSPNGLIPLHGGEEYEGVLNK
EEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHECCCCCCCEEECCCCCHHHHHHHH
LQSQPVSADGLKVFFGTSYVQTVGFDANGPVAQALLVYGQSIDPASPHAWDQMRQFSAKR
HHCCCCCCCCEEEEECCCCHHEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
WISLPFSEQAIAADPQLSVTKLSQ
EEECCCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure 
TPRIARGAVVLGTATLAAAALSGCATGNGNWSEQGLSAEIRRTSYGIPHIRANDYASVA
CCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHH
FGMAYAYAQDNVCLMASQVVTVSGERSATFGPDGTTEVSFKPMRNADADAFFRAILDDDA
HHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCHH
LQASAARQSPEAHELLRGYIAGYNRYLRDTPPSKRPAACRDAAWVRPITALDMARLAEEK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH
SIQASAGALAAGIVAAAPPQVTKSAAKSAALPARIDIAAIDFEAVNRDLQLLDPPIGSNG
CCHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHCCCCEEECCCCCCCC
WAFGKAATADGSGLLLGNPHFPWTTTNRFYQAHLTVPGKLDVMGASIASFPIISIGFNKD
CCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEEEECCHHHHCCEEEEECCCC
VAWTHTVSTARRFTLFELKLADGDPTTYLIDGKPRKMTTKTVSYAAKLADGRTEQRSHTF
CEEEEEHHHHHEEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEE
YMTEYGPVVAMPQAGLPWTAQKAYTLRDANQNNTRSIDTWLDIARAHNVGEIRTAIGNLG
EEEECCCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCC
IPWVNTIATDRSGRAMFADVSVTPNVSTSMLESCAPAGDGAVLAKKLMAGTGMVLLDGSR
CCCHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCC
GVCNWTVDPASPVPGLVPPSAMPVLERDDFVANSNDSSWLANPAQKMEGFSPVLGPQAVP
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCHHHH
QRLRTRVGLMEIGKRLNGVDGLPGNRFDIQNLQTVLFRDRNLAAELVLDDLLRACRTKAV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
QGDSDLRDGCTALGKWDRRSNLESRAAPLFREFWMRAHVIPNVYAIAFNPADPVNTPRGL
CCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
RMQDATVNTAVLKALKDAVGAMRKAGFALDAPLGEVQAAKSPNGLIPLHGGEEYEGVLNK
EEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHECCCCCCCEEECCCCCHHHHHHHH
LQSQPVSADGLKVFFGTSYVQTVGFDANGPVAQALLVYGQSIDPASPHAWDQMRQFSAKR
HHCCCCCCCCEEEEECCCCHHEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
WISLPFSEQAIAADPQLSVTKLSQ
EEECCCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA