Definition Cupriavidus metallidurans CH34 megaplasmid, complete sequence.
Accession NC_007974
Length 2,580,084

Click here to switch to the map view.

The map label for this gene is 94313768

Identifier: 94313768

GI number: 94313768

Start: 1503246

End: 1504301

Strand: Direct

Name: 94313768

Synonym: Rmet_4846

Alternate gene names: NA

Gene position: 1503246-1504301 (Clockwise)

Preceding gene: 94313767

Following gene: 94313769

Centisome position: 58.26

GC content: 67.61

Gene sequence:

>1056_bases
ATGCATCCTCTTCGCCATCGTCTTGCCCTGGCCACGCTGACGCTTGCCACTGCCACCGGCTACACAGCCTCCGCCCTAGT
CGCACTCATCGCACCCTTCGCACCCAACGCACACGCGCAGCCCGCGCCCGTCGTCTGGCAGATGGCGACCGAGTACCCGG
CCACGTCGATGCCCGGCGAAGGACTGACCACGTTTGCCCAGGAAGTCGCTACCCGCACGCAGGGCACATTGGCGCCGCAG
CCGACCTTCGACGCCAGCGCGGGCGTCAAGTCCGCCCAGATGCCGGCCGCCATCCGCGACGGCAAACTGCAGGCCGGCGA
TGCTTTCGGCGGCGCGTTGGGCGAGGTCGATCCGATTTTCCTGCTGTCGTCGCTGCCATTCGTAGCGACGTCGGTGGACA
AGGCCCATCGCCTGGCCGATCTGGCCCGCGCGGACTACGCGCAGGCATTCGAGAAGCAGGGCCAGCACCTGCTCTACATC
ACACCCTGGCCGCCAACGGGCCTCTGGACACACAAACCCGTGGGCACGCTCGACGATCTGCGCACGCTGTCCGTGCGCGC
CTATGACGAAACGTCCGCCGACGTCATGCGCGCTGCGGGAGCGAAGGCGCAGAACCTGTCGTTCGCCGATGCCATGCCGC
GTCTGAAGGATGGCTCGGTCAATGCCGTGCTTTCGTCGGGCGATGGCGGCGCGGGCCGCAAGCTCTGGGACTACCTGCCC
TACTTCACGGCCATCGGCTACGCCATGCCGTTGTCGTTTACGACCGTCAACGCAGCCGCCTGGCAATCCCTGACACCCGC
CCAGCGAGACGCCGTGACCGCCGCCGCCAGAGCGACCGAAGGCAAACAATGGTCGCGGCTGAATACCCGCCTGACCGAGA
ACACCGCCCGAATGCGCGCCAACGGTGTGACCATCGACGACAATCCAGCGCCCGCCGTGCAACAGGCCCTGCAAGCCGCC
GGGCTGAGCGCGGTCGGCGTCTGGCAGACACGCGTGGGCGAGCGCGGAGCCGCCTTGCTGAAGACCTATTTCAGCGCGGA
GGCAGGGCTCCACTGA

Upstream 100 bases:

>100_bases
CATCCCCCCATGGCGATGCCTATAATGCACTGGCACCCGGCATCGCCCGCAGAGGCGGAGCCCGGCATGCCGACATTGCC
CACCCACCCTCCGCCCCGCC

Downstream 100 bases:

>100_bases
GCATTGCGGCGTGGGTCGGCGACCGAATGATTGCCCTTTAGGGCAGCGGGATTACCCTTTGTGCCAATGGCGCCCGACCT
CCGGGTTGCCGATACTCGCG

Product: putative TRAP-type C4-dicarboxylate transport system, periplasmic component

Products: NA

Alternate protein names: TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; TRAP Dicarboxylate Transporter-DctP Subunit; Signal Peptide Protein; Exported Protein; Twin-Arginine Translocation Pathway Signal; Trap Dicarboxylate Transporter Dctp Subunit; TRAP Dicarboxylate Transporter; Trap Dicarboxylate Transporter-Dctp Subunit; TRAP-Type C4-Dicarboxylate Transporter Periplasmic Protein; Secreted Protein

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MHPLRHRLALATLTLATATGYTASALVALIAPFAPNAHAQPAPVVWQMATEYPATSMPGEGLTTFAQEVATRTQGTLAPQ
PTFDASAGVKSAQMPAAIRDGKLQAGDAFGGALGEVDPIFLLSSLPFVATSVDKAHRLADLARADYAQAFEKQGQHLLYI
TPWPPTGLWTHKPVGTLDDLRTLSVRAYDETSADVMRAAGAKAQNLSFADAMPRLKDGSVNAVLSSGDGGAGRKLWDYLP
YFTAIGYAMPLSFTTVNAAAWQSLTPAQRDAVTAAARATEGKQWSRLNTRLTENTARMRANGVTIDDNPAPAVQQALQAA
GLSAVGVWQTRVGERGAALLKTYFSAEAGLH

Sequences:

>Translated_351_residues
MHPLRHRLALATLTLATATGYTASALVALIAPFAPNAHAQPAPVVWQMATEYPATSMPGEGLTTFAQEVATRTQGTLAPQ
PTFDASAGVKSAQMPAAIRDGKLQAGDAFGGALGEVDPIFLLSSLPFVATSVDKAHRLADLARADYAQAFEKQGQHLLYI
TPWPPTGLWTHKPVGTLDDLRTLSVRAYDETSADVMRAAGAKAQNLSFADAMPRLKDGSVNAVLSSGDGGAGRKLWDYLP
YFTAIGYAMPLSFTTVNAAAWQSLTPAQRDAVTAAARATEGKQWSRLNTRLTENTARMRANGVTIDDNPAPAVQQALQAA
GLSAVGVWQTRVGERGAALLKTYFSAEAGLH
>Mature_351_residues
MHPLRHRLALATLTLATATGYTASALVALIAPFAPNAHAQPAPVVWQMATEYPATSMPGEGLTTFAQEVATRTQGTLAPQ
PTFDASAGVKSAQMPAAIRDGKLQAGDAFGGALGEVDPIFLLSSLPFVATSVDKAHRLADLARADYAQAFEKQGQHLLYI
TPWPPTGLWTHKPVGTLDDLRTLSVRAYDETSADVMRAAGAKAQNLSFADAMPRLKDGSVNAVLSSGDGGAGRKLWDYLP
YFTAIGYAMPLSFTTVNAAAWQSLTPAQRDAVTAAARATEGKQWSRLNTRLTENTARMRANGVTIDDNPAPAVQQALQAA
GLSAVGVWQTRVGERGAALLKTYFSAEAGLH

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37085; Mature: 37085

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPLRHRLALATLTLATATGYTASALVALIAPFAPNAHAQPAPVVWQMATEYPATSMPGE
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
GLTTFAQEVATRTQGTLAPQPTFDASAGVKSAQMPAAIRDGKLQAGDAFGGALGEVDPIF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHH
LLSSLPFVATSVDKAHRLADLARADYAQAFEKQGQHLLYITPWPPTGLWTHKPVGTLDDL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHH
RTLSVRAYDETSADVMRAAGAKAQNLSFADAMPRLKDGSVNAVLSSGDGGAGRKLWDYLP
HEEEEEECCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHH
YFTAIGYAMPLSFTTVNAAAWQSLTPAQRDAVTAAARATEGKQWSRLNTRLTENTARMRA
HHHHHHHHHCCEEEEECHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
NGVTIDDNPAPAVQQALQAAGLSAVGVWQTRVGERGAALLKTYFSAEAGLH
CCEEECCCCCHHHHHHHHHCCCCCEEHHHHHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHPLRHRLALATLTLATATGYTASALVALIAPFAPNAHAQPAPVVWQMATEYPATSMPGE
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
GLTTFAQEVATRTQGTLAPQPTFDASAGVKSAQMPAAIRDGKLQAGDAFGGALGEVDPIF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHH
LLSSLPFVATSVDKAHRLADLARADYAQAFEKQGQHLLYITPWPPTGLWTHKPVGTLDDL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHH
RTLSVRAYDETSADVMRAAGAKAQNLSFADAMPRLKDGSVNAVLSSGDGGAGRKLWDYLP
HEEEEEECCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHH
YFTAIGYAMPLSFTTVNAAAWQSLTPAQRDAVTAAARATEGKQWSRLNTRLTENTARMRA
HHHHHHHHHCCEEEEECHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
NGVTIDDNPAPAVQQALQAAGLSAVGVWQTRVGERGAALLKTYFSAEAGLH
CCEEECCCCCHHHHHHHHHCCCCCEEHHHHHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA