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The map label for this gene is ybjL [C]

Identifier: 94313769

GI number: 94313769

Start: 1504535

End: 1506238

Strand: Direct

Name: ybjL [C]

Synonym: Rmet_4847

Alternate gene names: 94313769

Gene position: 1504535-1506238 (Clockwise)

Preceding gene: 94313768

Following gene: 94313771

Centisome position: 58.31

GC content: 65.14

Gene sequence:

>1704_bases
ATGCAATGCTCAATCGGATTCTTCAACCAGATGCCCACGGCGGTGCTGTTCATCACCGTCGGCCTTGGCTACGCCATTGG
CAAGCTTCGCGTCGGCCCGATCGTGCTCGGCGGTGTCTGCGGCACGCTGATCGTGGCGCTGCTTGTCGGGCAGACCGGGT
GCCAGATGCACGGCGAGTTGAAGGACGTTGCCTTCGCGCTCTTCATCTTCGCGATGGGATATTCGGGCGGCCCGCAGTTC
TTCGCGAACTTGAACCGCTCCAGCCTGCGGTTCATGGTCCTGCCGCTCATCGAAGCGTTCGTGGTACTGGCAATCGTGCT
GGTGGCCGTGCGAATGCTGGATCTGGACCCTGGCACGGCGGCGGGTCTCGCAGCCGGCGCGGCGACGGAATCCGCAGTGG
TCGGCACGGCTGCGGAGGCGCTCAAACATCTGAACCTGGTCCCGACAGAACTGGCCCGGATGCAATCGAACATCGCCACG
GCCTATACGCTGACCTACCTCGTCGGCCTGATCAGCATCGTGTTCTTCACCAGCCAGGTGGCTCCCTTCCTGCTTCGCTT
CAACCTGCGCGAGGCATCGAGCGAACTGGCCAAGGAACTGCAGGCCGCGTCCGACGATGACGTCGCCACGCAGCCGGTGC
TGCCCCGCCTGGTGGGACGTGCTCACCGCGTGGAACATGCGGCCGGCCTGACCGTGCGCCAACTGGAAGCCGCGCTTGGC
GGGCGGACACTGGTGATGGGGCTGGTGCGCGACGGCAAGCTCATGGAGTCGGTGCCGGATCTGACCATAAAACGGGACGA
CATCGTGGCGCTGATCGGCGTGCGCGACAAACTCGTCTCGGCTCGCGAGGTGATTGGCCAGGAGGTGTCGTTGCCGCTGA
GCCAGTCCGACGTGCTGCGGCTCGAAGAGCATCAGGTGATCGTCAACAATCCCGCTGTCAATGGCCGCTCGCTGGCCGAA
CTCGGCCGGGAAGCCGCCCAGCAACATCTTCGCTACGTCTGGGTCCAGCAGATCGTTCGATCCGGCATGAGCCTGCCGAT
CACGCCCGCCACACGCCTGCAGCATGGCGACCGGGTAAGCCTGGTGGGCGTGGAACCGACACTGACCTCAGCGGCCCGCA
ACCTGGGCAGGGATCTACGCACCACCGATACCACCGAACTCGTCTTCCTGTGCGCGGGCATCCTGATTGGCCTCTTGATC
GGCAGCGTCACCCTGAAGGCAGCCGGCATCCCGATCTCGCTCGGCAGCGGCGGCGGCGCGCTGCTCAGCGGTCTTGTCTT
CGGCTGGATCAATTTCAAACGGCCCGGCGTGGGCGACATGCCAAGCGCCGCGGTCCAGTTGCTGAAAGACCTGGGACTGG
CGATGTTCGTGGCCTGCGTCGGCTTGTCTGCCGGACCTGATGCCGTCACGCTGATTCGCGAGCATGGCGCCGTGTTGCCG
CTCGTCGGCCTGGCCGTGTCGCTGACGCCGGCATGCATGTCACTCTGGATCGGCCACAAATTCCTGAAAATCCAGGGGCC
ACTGCTGGTCGGCGCCATCGCGGGGCAGCACGTCAGCACGCCGGCGATCAGCGCCGTGCTGGCCGCCAGCCAGAGTTCGG
TGCCGCTGCTCGGCTACACGGTGACGTATGCCATCGCCAACGTGATGCTGCCGGTGCTTGGGCCAATCATCGTGGCCCTC
GCATATCGCGTTGGCGGCATGTGA

Upstream 100 bases:

>100_bases
TTGCCAGGGGGTGCCAGCCACAGCCCTGGCCGCGAGTCAGGATCCTCCGGTATCCGCAGGCGTTTGCGCACGACCCTCGT
GTCTACAGGATCTCCCGCCC

Downstream 100 bases:

>100_bases
TCGATAACGGGCGTGTTGCTGCCCTCAGGTGGAGCATCATTCCGGAGGCTGATGCGTGCGCTCAGCCGCTGCCCCGGAAC
GGAATCAGTAGGCCGTCACA

Product: putative transporter, YidE/YbjL duplication

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MQCSIGFFNQMPTAVLFITVGLGYAIGKLRVGPIVLGGVCGTLIVALLVGQTGCQMHGELKDVAFALFIFAMGYSGGPQF
FANLNRSSLRFMVLPLIEAFVVLAIVLVAVRMLDLDPGTAAGLAAGAATESAVVGTAAEALKHLNLVPTELARMQSNIAT
AYTLTYLVGLISIVFFTSQVAPFLLRFNLREASSELAKELQAASDDDVATQPVLPRLVGRAHRVEHAAGLTVRQLEAALG
GRTLVMGLVRDGKLMESVPDLTIKRDDIVALIGVRDKLVSAREVIGQEVSLPLSQSDVLRLEEHQVIVNNPAVNGRSLAE
LGREAAQQHLRYVWVQQIVRSGMSLPITPATRLQHGDRVSLVGVEPTLTSAARNLGRDLRTTDTTELVFLCAGILIGLLI
GSVTLKAAGIPISLGSGGGALLSGLVFGWINFKRPGVGDMPSAAVQLLKDLGLAMFVACVGLSAGPDAVTLIREHGAVLP
LVGLAVSLTPACMSLWIGHKFLKIQGPLLVGAIAGQHVSTPAISAVLAASQSSVPLLGYTVTYAIANVMLPVLGPIIVAL
AYRVGGM

Sequences:

>Translated_567_residues
MQCSIGFFNQMPTAVLFITVGLGYAIGKLRVGPIVLGGVCGTLIVALLVGQTGCQMHGELKDVAFALFIFAMGYSGGPQF
FANLNRSSLRFMVLPLIEAFVVLAIVLVAVRMLDLDPGTAAGLAAGAATESAVVGTAAEALKHLNLVPTELARMQSNIAT
AYTLTYLVGLISIVFFTSQVAPFLLRFNLREASSELAKELQAASDDDVATQPVLPRLVGRAHRVEHAAGLTVRQLEAALG
GRTLVMGLVRDGKLMESVPDLTIKRDDIVALIGVRDKLVSAREVIGQEVSLPLSQSDVLRLEEHQVIVNNPAVNGRSLAE
LGREAAQQHLRYVWVQQIVRSGMSLPITPATRLQHGDRVSLVGVEPTLTSAARNLGRDLRTTDTTELVFLCAGILIGLLI
GSVTLKAAGIPISLGSGGGALLSGLVFGWINFKRPGVGDMPSAAVQLLKDLGLAMFVACVGLSAGPDAVTLIREHGAVLP
LVGLAVSLTPACMSLWIGHKFLKIQGPLLVGAIAGQHVSTPAISAVLAASQSSVPLLGYTVTYAIANVMLPVLGPIIVAL
AYRVGGM
>Mature_567_residues
MQCSIGFFNQMPTAVLFITVGLGYAIGKLRVGPIVLGGVCGTLIVALLVGQTGCQMHGELKDVAFALFIFAMGYSGGPQF
FANLNRSSLRFMVLPLIEAFVVLAIVLVAVRMLDLDPGTAAGLAAGAATESAVVGTAAEALKHLNLVPTELARMQSNIAT
AYTLTYLVGLISIVFFTSQVAPFLLRFNLREASSELAKELQAASDDDVATQPVLPRLVGRAHRVEHAAGLTVRQLEAALG
GRTLVMGLVRDGKLMESVPDLTIKRDDIVALIGVRDKLVSAREVIGQEVSLPLSQSDVLRLEEHQVIVNNPAVNGRSLAE
LGREAAQQHLRYVWVQQIVRSGMSLPITPATRLQHGDRVSLVGVEPTLTSAARNLGRDLRTTDTTELVFLCAGILIGLLI
GSVTLKAAGIPISLGSGGGALLSGLVFGWINFKRPGVGDMPSAAVQLLKDLGLAMFVACVGLSAGPDAVTLIREHGAVLP
LVGLAVSLTPACMSLWIGHKFLKIQGPLLVGAIAGQHVSTPAISAVLAASQSSVPLLGYTVTYAIANVMLPVLGPIIVAL
AYRVGGM

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAE transporter (TC 2.A.81) family [H]

Homologues:

Organism=Escherichia coli, GI1787071, Length=556, Percent_Identity=29.8561151079137, Blast_Score=234, Evalue=9e-63,
Organism=Escherichia coli, GI87082315, Length=537, Percent_Identity=26.6294227188082, Blast_Score=125, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022457
- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 59438; Mature: 59438

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCSIGFFNQMPTAVLFITVGLGYAIGKLRVGPIVLGGVCGTLIVALLVGQTGCQMHGEL
CCCCCCCHHCCCHHHHHHHHHHHHHHCCEEECCEEEHHHHHHHHHHHHHCCCCCCCCCHH
KDVAFALFIFAMGYSGGPQFFANLNRSSLRFMVLPLIEAFVVLAIVLVAVRMLDLDPGTA
HHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AGLAAGAATESAVVGTAAEALKHLNLVPTELARMQSNIATAYTLTYLVGLISIVFFTSQV
HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APFLLRFNLREASSELAKELQAASDDDVATQPVLPRLVGRAHRVEHAAGLTVRQLEAALG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GRTLVMGLVRDGKLMESVPDLTIKRDDIVALIGVRDKLVSAREVIGQEVSLPLSQSDVLR
CHHEEEHHHCCCHHHHHCCCCEEECCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHE
LEEHQVIVNNPAVNGRSLAELGREAAQQHLRYVWVQQIVRSGMSLPITPATRLQHGDRVS
EECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEE
LVGVEPTLTSAARNLGRDLRTTDTTELVFLCAGILIGLLIGSVTLKAAGIPISLGSGGGA
EEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCHH
LLSGLVFGWINFKRPGVGDMPSAAVQLLKDLGLAMFVACVGLSAGPDAVTLIREHGAVLP
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH
LVGLAVSLTPACMSLWIGHKFLKIQGPLLVGAIAGQHVSTPAISAVLAASQSSVPLLGYT
HHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHH
VTYAIANVMLPVLGPIIVALAYRVGGM
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQCSIGFFNQMPTAVLFITVGLGYAIGKLRVGPIVLGGVCGTLIVALLVGQTGCQMHGEL
CCCCCCCHHCCCHHHHHHHHHHHHHHCCEEECCEEEHHHHHHHHHHHHHCCCCCCCCCHH
KDVAFALFIFAMGYSGGPQFFANLNRSSLRFMVLPLIEAFVVLAIVLVAVRMLDLDPGTA
HHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AGLAAGAATESAVVGTAAEALKHLNLVPTELARMQSNIATAYTLTYLVGLISIVFFTSQV
HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APFLLRFNLREASSELAKELQAASDDDVATQPVLPRLVGRAHRVEHAAGLTVRQLEAALG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GRTLVMGLVRDGKLMESVPDLTIKRDDIVALIGVRDKLVSAREVIGQEVSLPLSQSDVLR
CHHEEEHHHCCCHHHHHCCCCEEECCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHE
LEEHQVIVNNPAVNGRSLAELGREAAQQHLRYVWVQQIVRSGMSLPITPATRLQHGDRVS
EECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEE
LVGVEPTLTSAARNLGRDLRTTDTTELVFLCAGILIGLLIGSVTLKAAGIPISLGSGGGA
EEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCHH
LLSGLVFGWINFKRPGVGDMPSAAVQLLKDLGLAMFVACVGLSAGPDAVTLIREHGAVLP
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH
LVGLAVSLTPACMSLWIGHKFLKIQGPLLVGAIAGQHVSTPAISAVLAASQSSVPLLGYT
HHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHH
VTYAIANVMLPVLGPIIVALAYRVGGM
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA