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The map label for this gene is ompP [H]

Identifier: 94313756

GI number: 94313756

Start: 1488210

End: 1489271

Strand: Reverse

Name: ompP [H]

Synonym: Rmet_4834

Alternate gene names: 94313756

Gene position: 1489271-1488210 (Counterclockwise)

Preceding gene: 94313758

Following gene: 94313750

Centisome position: 57.72

GC content: 64.41

Gene sequence:

>1062_bases
GTGAAGAAAGCTCTATTTGCCTTGGCGGCTGCGGGTACGTGCGCCCTGTCCGGCGTTGCATCGGCACAAACCGCCTCGAA
CGTGACCCTGTACGGCATCGCCGACGCAGGTATTGAATTCGCTACCCATTCCCCGGGTGGCAACGGTGGTACCGCGGTGC
GCGTGAGCTCGGGCAACATGTCCGGTTCGCGCTGGGGCCTGCGTGGCGTGGAAGACCTGGGCGGTGGCCTGAAGGGTATC
TTCACGCTCGAGTCGGGCTTCGACATCGACACCGGTTTGTCCGGCCAGAGCAGCCGACTGTTCGGTCGCCAGGCCTTTGT
GGGCCTGCAGGGCGGCTTTGGTGCTGTGACCCTGGGCCGCCAGCAGAACGCGTTGTATGACCTGTTCGGTGCCTACGACC
CGATGGGCGTGGGTCCGAAGTACTCGCTGAACTCGGTTGACTCGGGCTTCAATGGCCGCGCCGACAACTCGCTCAAGTAC
ACGGGCAAGTTCGGTGGCCTGACCGGCACCGGGTACTACAGCACGGGTGCCAACAATAACGGCGAAGTGCCGGGCAACTA
CAAGGCTGGTCGCGCATTCGGCGCCGGCCTGGCCTACACCGCCGGCGCCTTCTCGGTCGGCACCGCCTATGACCAGACTC
AGAGCGGCACGCCGGCCATCTCGGACCGCGCCATCAAACGTCTGGCCGTCGGTACGTCCTACGACTTTGGCCCGGCCAAG
GTGTTCGCCGGCTATCGCTGGATGCGTGACGATGGCGTGGCCACGGCTGCTACTGCCGCCGCGCGCAACAATGTCTACTG
GCTCGGCGGCCTGTACCGCGTGACCCCGGCCCTGTCCCTGACTGGTGCCGCGTACTACACTGATGCGCATGAGAGCAACA
ACGATTCGTGGATGTTCGTGCTGTCGGCCGATTACGCCTTCTCGAAGCGCACCGATGCCTATCTGAACGTGGGCTACGTG
ACCAACAAGGGCGCATCGAACCTGGGCCTCAACGGTGCTGGCACGGCTATCGCCGGTGCCAACCAGACTGGCGCCATCGC
AGGCATCCGTCACCGCTTCTAA

Upstream 100 bases:

>100_bases
TATCGGTCACCGCTCGCCGGCGTTGTGTCGCAAGCACTTTCCGGACGACTGCGGAGCGGGGAAGCATCTCAATGTCTTAA
ACAAAACAGAGAAATATACA

Downstream 100 bases:

>100_bases
GCATCCACGATCCGGCTAAAGGGAGGCACCGACAGGCGGGGCCTTTCCCCCCGTCCTGCCGGATAAAAAAACGCCCCTGG
ACCGACTTGGCGGCCCAGGG

Product: putative outer membrane pore protein (gram-negative type)

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKKALFALAAAGTCALSGVASAQTASNVTLYGIADAGIEFATHSPGGNGGTAVRVSSGNMSGSRWGLRGVEDLGGGLKGI
FTLESGFDIDTGLSGQSSRLFGRQAFVGLQGGFGAVTLGRQQNALYDLFGAYDPMGVGPKYSLNSVDSGFNGRADNSLKY
TGKFGGLTGTGYYSTGANNNGEVPGNYKAGRAFGAGLAYTAGAFSVGTAYDQTQSGTPAISDRAIKRLAVGTSYDFGPAK
VFAGYRWMRDDGVATAATAAARNNVYWLGGLYRVTPALSLTGAAYYTDAHESNNDSWMFVLSADYAFSKRTDAYLNVGYV
TNKGASNLGLNGAGTAIAGANQTGAIAGIRHRF

Sequences:

>Translated_353_residues
MKKALFALAAAGTCALSGVASAQTASNVTLYGIADAGIEFATHSPGGNGGTAVRVSSGNMSGSRWGLRGVEDLGGGLKGI
FTLESGFDIDTGLSGQSSRLFGRQAFVGLQGGFGAVTLGRQQNALYDLFGAYDPMGVGPKYSLNSVDSGFNGRADNSLKY
TGKFGGLTGTGYYSTGANNNGEVPGNYKAGRAFGAGLAYTAGAFSVGTAYDQTQSGTPAISDRAIKRLAVGTSYDFGPAK
VFAGYRWMRDDGVATAATAAARNNVYWLGGLYRVTPALSLTGAAYYTDAHESNNDSWMFVLSADYAFSKRTDAYLNVGYV
TNKGASNLGLNGAGTAIAGANQTGAIAGIRHRF
>Mature_353_residues
MKKALFALAAAGTCALSGVASAQTASNVTLYGIADAGIEFATHSPGGNGGTAVRVSSGNMSGSRWGLRGVEDLGGGLKGI
FTLESGFDIDTGLSGQSSRLFGRQAFVGLQGGFGAVTLGRQQNALYDLFGAYDPMGVGPKYSLNSVDSGFNGRADNSLKY
TGKFGGLTGTGYYSTGANNNGEVPGNYKAGRAFGAGLAYTAGAFSVGTAYDQTQSGTPAISDRAIKRLAVGTSYDFGPAK
VFAGYRWMRDDGVATAATAAARNNVYWLGGLYRVTPALSLTGAAYYTDAHESNNDSWMFVLSADYAFSKRTDAYLNVGYV
TNKGASNLGLNGAGTAIAGANQTGAIAGIRHRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 36246; Mature: 36246

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALFALAAAGTCALSGVASAQTASNVTLYGIADAGIEFATHSPGGNGGTAVRVSSGNM
CCHHHEEHHHCCHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEECCCC
SGSRWGLRGVEDLGGGLKGIFTLESGFDIDTGLSGQSSRLFGRQAFVGLQGGFGAVTLGR
CCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEECCEEEEEECCCCCEEEECC
QQNALYDLFGAYDPMGVGPKYSLNSVDSGFNGRADNSLKYTGKFGGLTGTGYYSTGANNN
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC
GEVPGNYKAGRAFGAGLAYTAGAFSVGTAYDQTQSGTPAISDRAIKRLAVGTSYDFGPAK
CCCCCCCCCCCCCCCCHHEECCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHH
VFAGYRWMRDDGVATAATAAARNNVYWLGGLYRVTPALSLTGAAYYTDAHESNNDSWMFV
HHHCEEEECCCCCCHHHHHHHCCCEEEECCCEEECCCEEECCEEEEECCCCCCCCCEEEE
LSADYAFSKRTDAYLNVGYVTNKGASNLGLNGAGTAIAGANQTGAIAGIRHRF
EECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCEEEHCCCC
>Mature Secondary Structure
MKKALFALAAAGTCALSGVASAQTASNVTLYGIADAGIEFATHSPGGNGGTAVRVSSGNM
CCHHHEEHHHCCHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEECCCC
SGSRWGLRGVEDLGGGLKGIFTLESGFDIDTGLSGQSSRLFGRQAFVGLQGGFGAVTLGR
CCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEECCEEEEEECCCCCEEEECC
QQNALYDLFGAYDPMGVGPKYSLNSVDSGFNGRADNSLKYTGKFGGLTGTGYYSTGANNN
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC
GEVPGNYKAGRAFGAGLAYTAGAFSVGTAYDQTQSGTPAISDRAIKRLAVGTSYDFGPAK
CCCCCCCCCCCCCCCCHHEECCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHH
VFAGYRWMRDDGVATAATAAARNNVYWLGGLYRVTPALSLTGAAYYTDAHESNNDSWMFV
HHHCEEEECCCCCCHHHHHHHCCCEEEECCCEEECCCEEECCEEEEECCCCCCCCCEEEE
LSADYAFSKRTDAYLNVGYVTNKGASNLGLNGAGTAIAGANQTGAIAGIRHRF
EECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCEEEHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]