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The map label for this gene is ycaO [H]

Identifier: 94313744

GI number: 94313744

Start: 1472967

End: 1475171

Strand: Reverse

Name: ycaO [H]

Synonym: Rmet_4822

Alternate gene names: 94313744

Gene position: 1475171-1472967 (Counterclockwise)

Preceding gene: 94313748

Following gene: 94313737

Centisome position: 57.18

GC content: 53.11

Gene sequence:

>2205_bases
ATGGAAATTAAGGTCGACTTTCTCGATAAGCTGCGTCTTGAAGCTAAGTTCGATGATTTCACGGTAATAGCTGACCAGCC
TATCCGTTATAAAGGCGATGGTTCCGCACCTGGTCCGTTCGATTATTTTCTCGCCTCGTCGGCTTTGTGTGCGGCCTACT
TTGTCAAAGTGTACTGTGTGGCCCGCAATATTCCCACCGATAATATCCGCCTGTCGCAGAATAATATTGTTGATCCGGAA
AACAGATATCAGCAGATTTTCAAGATCCAGGTCGAATTGCCAGCAGATATTTCTGCCAAGGACCGCCAGGGTATCTTGCG
ATCCATCGATCGCTGCACGGTAAAAAAGGTGGTGCAAACCGGACCCGAGTTTGTGATCGAAGAGGTGGAGAACCTGGACG
CCGATGCTCAATCGTTGCTGACGTTGAAGCCGGCGTCTGGCGCCAGCACCTATATTTCAGGCAAGGATCTCCCATTGGAG
CAAACTATCGCCAATATGTCAGGCATTTTGGCGGGCCTGGGGATGAAGATTGAAATCGCGTCATGGCGCAATATCGTTCC
CAATGTCTGGTCGCTACATATCCGTGACGCGCACTCGTCAATGTGTTTCACCAACGGCAAGGGAGCAACCAAGGAAAGCG
CATTGGCGTCGGCGTTGGGTGAATTTATCGAACGCCTGAATTGCAACCATTTTTATGCCGGTACATTCTGGGGCGAAGAT
CTCGCCAATGCGGCGTTTGTACACTACCCGAACGAGCGCTGGTTCAAGCCGGGACGCAAAGATGCGCTACCCGTTGAAAT
TCTCGATGAATACTGCCTGCCTATATACAATCCCGATGGCGAGTTACGCGGCTCGCATCTGTACGAGACCAACTCGGGGA
ATGTGCAGCGTGGTATCTGTTCGCTGCCCTTCGTACGCCAGTCAGACGGCGAAGTGGTGTATTTCCCCTCCAATCTGGTC
GAAAATCTTTACGCCAGCAATGGCATGAGTGCAGGCAATACACTGGCCGAAGCACAGGTGCAATGCTTGTCGGAGATTTT
CGAGCGGGCGGTAAAGCGCGAGATTCTGGAGGGCGAAATGGCACTGCCTGATGTGCCCCAGGAAGTGCTGGCGAAATATC
CTGGCATTATGGCTGGCATTCAGGTGCTGGAAGAGCAAGGTTTTCCGATATTGGTGAAGGATGCATCGTTGGGTGGAATC
TATCCGGTGATGTGCGTCACCTTGATGAACCCACGCACTGGCGGTGTCTTTGCTTCGTTCGGTGCGCACCCAAGCTTCGA
GGTGGCGCTGGAACGGAGTTTGACGGAATTGCTGCAGGGTCGTAGTTTTGAAGGCCTGAACGATCTACCACGGCCCAGCT
TTGTCAGTAATGCCGTGACTGAGCCAAACAATTTTGTCGAGCACTTCATTGACTCCAGCGGCGTGGTGTCGTGGCGCTTT
TTCAGCGCCAAATCGGATTTCGATTTTGTCGAGTGGGATTTTTCTGGCCAGGGCAAGAATTCCAATACCGAGGAAGCAGC
AACCTTGCTCAGCATCCTGGAAGGCATGGGCAAGGAAGTGTATATGGCGGTGTATGACCAGCTCGGCTCCGTTGCTTGCC
GGATATTGGTTCCTGGCTATTCGGAAGTTTATCCTGTCGAGGATCTGATCTGGGATAACACAAACAAGGCACTGTCGTTC
CGCGCAGACATTTTGAACTTGCATCGCCTGGACGACGAAAGCCTGGAGGCCCTGCTTGAGCGCCTGGATAACAGTGAGCT
CGATGAATACGCCGACATCGCCACGCTGATCGGCATAGAGTTTGACGAGAATACCGATTGGGGCCAGCTGACAGTGTTGG
AGTTGAAGCTGCTCATTCATCTCGCGTTGCAGCAATTTGAGGCGGCGCACGAACTGGTGGGCGCCTTCTTGCAATACAAC
GACAACACGCTCGAGCGCGGACTGTTTTACCAAGCCTTGGATGTGGTGCTGGAGGTGCTGTTGGATGACGACCTTGACCT
GGAAGACTACAAGGTCAACTTCCGTCGGATGTATGGCAATGCGCGGATGGACGCGGTGCTCGGTTCAGTTGACGGCAGCG
TGCGTTTCTTTGGTTTGACGCCAACCAGCATGAAATTGGAGGGGCTCGACAGGCACCACCGCCTGATTGACAGCTACAAG
AAATTGCACGCCGCGCGGGCAAATGCAGCGGCTGCAGCCAGTTAA

Upstream 100 bases:

>100_bases
ATAACGCTTGCAGAAAGCTTGGCCATATTACAATACGCACCAGCGCGGCATCGAAAATAGCGACCGCATCACATTTTTGG
CATCGTTTTTGGAATTCCTC

Downstream 100 bases:

>100_bases
GGCCGAGGATGAAGACGGCGGTGAGGGCCTCCAGCGGGAAGCGCTCACCGTCAGTTCCGCTGTCGAGAAAGCTGAAAGGC
CGCTCAGGGTCGTTCTGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 734; Mature: 734

Protein sequence:

>734_residues
MEIKVDFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKVYCVARNIPTDNIRLSQNNIVDPE
NRYQQIFKIQVELPADISAKDRQGILRSIDRCTVKKVVQTGPEFVIEEVENLDADAQSLLTLKPASGASTYISGKDLPLE
QTIANMSGILAGLGMKIEIASWRNIVPNVWSLHIRDAHSSMCFTNGKGATKESALASALGEFIERLNCNHFYAGTFWGED
LANAAFVHYPNERWFKPGRKDALPVEILDEYCLPIYNPDGELRGSHLYETNSGNVQRGICSLPFVRQSDGEVVYFPSNLV
ENLYASNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEMALPDVPQEVLAKYPGIMAGIQVLEEQGFPILVKDASLGGI
YPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPRPSFVSNAVTEPNNFVEHFIDSSGVVSWRF
FSAKSDFDFVEWDFSGQGKNSNTEEAATLLSILEGMGKEVYMAVYDQLGSVACRILVPGYSEVYPVEDLIWDNTNKALSF
RADILNLHRLDDESLEALLERLDNSELDEYADIATLIGIEFDENTDWGQLTVLELKLLIHLALQQFEAAHELVGAFLQYN
DNTLERGLFYQALDVVLEVLLDDDLDLEDYKVNFRRMYGNARMDAVLGSVDGSVRFFGLTPTSMKLEGLDRHHRLIDSYK
KLHAARANAAAAAS

Sequences:

>Translated_734_residues
MEIKVDFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKVYCVARNIPTDNIRLSQNNIVDPE
NRYQQIFKIQVELPADISAKDRQGILRSIDRCTVKKVVQTGPEFVIEEVENLDADAQSLLTLKPASGASTYISGKDLPLE
QTIANMSGILAGLGMKIEIASWRNIVPNVWSLHIRDAHSSMCFTNGKGATKESALASALGEFIERLNCNHFYAGTFWGED
LANAAFVHYPNERWFKPGRKDALPVEILDEYCLPIYNPDGELRGSHLYETNSGNVQRGICSLPFVRQSDGEVVYFPSNLV
ENLYASNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEMALPDVPQEVLAKYPGIMAGIQVLEEQGFPILVKDASLGGI
YPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPRPSFVSNAVTEPNNFVEHFIDSSGVVSWRF
FSAKSDFDFVEWDFSGQGKNSNTEEAATLLSILEGMGKEVYMAVYDQLGSVACRILVPGYSEVYPVEDLIWDNTNKALSF
RADILNLHRLDDESLEALLERLDNSELDEYADIATLIGIEFDENTDWGQLTVLELKLLIHLALQQFEAAHELVGAFLQYN
DNTLERGLFYQALDVVLEVLLDDDLDLEDYKVNFRRMYGNARMDAVLGSVDGSVRFFGLTPTSMKLEGLDRHHRLIDSYK
KLHAARANAAAAAS
>Mature_734_residues
MEIKVDFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKVYCVARNIPTDNIRLSQNNIVDPE
NRYQQIFKIQVELPADISAKDRQGILRSIDRCTVKKVVQTGPEFVIEEVENLDADAQSLLTLKPASGASTYISGKDLPLE
QTIANMSGILAGLGMKIEIASWRNIVPNVWSLHIRDAHSSMCFTNGKGATKESALASALGEFIERLNCNHFYAGTFWGED
LANAAFVHYPNERWFKPGRKDALPVEILDEYCLPIYNPDGELRGSHLYETNSGNVQRGICSLPFVRQSDGEVVYFPSNLV
ENLYASNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEMALPDVPQEVLAKYPGIMAGIQVLEEQGFPILVKDASLGGI
YPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPRPSFVSNAVTEPNNFVEHFIDSSGVVSWRF
FSAKSDFDFVEWDFSGQGKNSNTEEAATLLSILEGMGKEVYMAVYDQLGSVACRILVPGYSEVYPVEDLIWDNTNKALSF
RADILNLHRLDDESLEALLERLDNSELDEYADIATLIGIEFDENTDWGQLTVLELKLLIHLALQQFEAAHELVGAFLQYN
DNTLERGLFYQALDVVLEVLLDDDLDLEDYKVNFRRMYGNARMDAVLGSVDGSVRFFGLTPTSMKLEGLDRHHRLIDSYK
KLHAARANAAAAAS

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=582, Percent_Identity=46.0481099656357, Blast_Score=519, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 81640; Mature: 81640

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKVDFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKVYCV
CEEEEEHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARNIPTDNIRLSQNNIVDPENRYQQIFKIQVELPADISAKDRQGILRSIDRCTVKKVVQT
HCCCCCCCEEECCCCCCCCHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
GPEFVIEEVENLDADAQSLLTLKPASGASTYISGKDLPLEQTIANMSGILAGLGMKIEIA
CHHHHHHHHHCCCCCCHHEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEC
SWRNIVPNVWSLHIRDAHSSMCFTNGKGATKESALASALGEFIERLNCNHFYAGTFWGED
CHHCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHH
LANAAFVHYPNERWFKPGRKDALPVEILDEYCLPIYNPDGELRGSHLYETNSGNVQRGIC
HCCCEEEECCCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCC
SLPFVRQSDGEVVYFPSNLVENLYASNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEM
CCCCEECCCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ALPDVPQEVLAKYPGIMAGIQVLEEQGFPILVKDASLGGIYPVMCVTLMNPRTGGVFASF
CCCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEC
GAHPSFEVALERSLTELLQGRSFEGLNDLPRPSFVSNAVTEPNNFVEHFIDSSGVVSWRF
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCEEEEEE
FSAKSDFDFVEWDFSGQGKNSNTEEAATLLSILEGMGKEVYMAVYDQLGSVACRILVPGY
EECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEECCC
SEVYPVEDLIWDNTNKALSFRADILNLHRLDDESLEALLERLDNSELDEYADIATLIGIE
CCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHEEE
FDENTDWGQLTVLELKLLIHLALQQFEAAHELVGAFLQYNDNTLERGLFYQALDVVLEVL
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LDDDLDLEDYKVNFRRMYGNARMDAVLGSVDGSVRFFGLTPTSMKLEGLDRHHRLIDSYK
HCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCEEECCCHHHHHHHHHHH
KLHAARANAAAAAS
HHHHHHCCCHHCCC
>Mature Secondary Structure
MEIKVDFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKVYCV
CEEEEEHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARNIPTDNIRLSQNNIVDPENRYQQIFKIQVELPADISAKDRQGILRSIDRCTVKKVVQT
HCCCCCCCEEECCCCCCCCHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
GPEFVIEEVENLDADAQSLLTLKPASGASTYISGKDLPLEQTIANMSGILAGLGMKIEIA
CHHHHHHHHHCCCCCCHHEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEC
SWRNIVPNVWSLHIRDAHSSMCFTNGKGATKESALASALGEFIERLNCNHFYAGTFWGED
CHHCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHH
LANAAFVHYPNERWFKPGRKDALPVEILDEYCLPIYNPDGELRGSHLYETNSGNVQRGIC
HCCCEEEECCCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCC
SLPFVRQSDGEVVYFPSNLVENLYASNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEM
CCCCEECCCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ALPDVPQEVLAKYPGIMAGIQVLEEQGFPILVKDASLGGIYPVMCVTLMNPRTGGVFASF
CCCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEC
GAHPSFEVALERSLTELLQGRSFEGLNDLPRPSFVSNAVTEPNNFVEHFIDSSGVVSWRF
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCEEEEEE
FSAKSDFDFVEWDFSGQGKNSNTEEAATLLSILEGMGKEVYMAVYDQLGSVACRILVPGY
EECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEECCC
SEVYPVEDLIWDNTNKALSFRADILNLHRLDDESLEALLERLDNSELDEYADIATLIGIE
CCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHEEE
FDENTDWGQLTVLELKLLIHLALQQFEAAHELVGAFLQYNDNTLERGLFYQALDVVLEVL
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LDDDLDLEDYKVNFRRMYGNARMDAVLGSVDGSVRFFGLTPTSMKLEGLDRHHRLIDSYK
HCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCEEECCCHHHHHHHHHHH
KLHAARANAAAAAS
HHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]