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The map label for this gene is 94313726

Identifier: 94313726

GI number: 94313726

Start: 1451344

End: 1452345

Strand: Reverse

Name: 94313726

Synonym: Rmet_4804

Alternate gene names: NA

Gene position: 1452345-1451344 (Counterclockwise)

Preceding gene: 94313727

Following gene: 94313716

Centisome position: 56.29

GC content: 63.67

Gene sequence:

>1002_bases
ATGACAGCCGCCACAACAGCCGTGCCGAAAATCCTGATCATTGGCGCAAACGGGCAACTTGGATCGGAGCTGGCTCTGGC
ATTGGCGGAACGTCATGGGCGTGAGCAGGTGGTGACGTCGGACGTGGTACCGACCGGCCGCCACGTCCATATCGCGCACG
AGATGCTTAACGTGACGGATCGCGGTGAACTGACGACTGTGATCGAGCGGCACGGCATCACGCAGATTTATCTGCTGGCG
GCCGCGCTGTCGGCGACGGGGGAGAAGGCGCCCCAATGGGCCTGGAACCTGAACATGACAGGCCTGCTGAACGTGCTGGA
AGCCGCGCGGCACCATGGCATTGAGCGGGTGTTCTGGCCCAGTTCGATTGCCGCGTTTGGGCCCACCACGCCGAGCATCG
ACACGCCGCAGAAGACGGTCATGGAACCGACCACCGTGTACGGCATCTCGAAACAGGCTGGGGAAGGTTGGTGTCGCTGG
TACTTCGAGAACCATGGCGTCGACGTTCGCAGCGTGCGGTATCCCGGGCTGATCTCGCACAAGACCCCGCCGGGCGGCGG
CACGACCGACTATGCCGTCGACATCTTCCACCATGCCGTACGCAGTGAGCCCTACACCTGCTTCTTGAAGGAAGACGAAC
GGCTACCGATGATGTACATGCCCGATGCCATCCGGGCCACGCTGGAACTGATGGAGGCGCCACGCGAACAGGTGCGCGAA
CGTGGCAGCTACAACCTGGCCGCAGTGAGTTTCACGCCGGCCGAAATCGCGGCGGCGATCCGGCTACGCGTGCCTGAATT
TGAAGTCCACTACGCGCCTGACTACCGGCAGGCGATTGCACAGGGCTGGCCCGATTCGATCGACGACAGCGCGGCGCGTG
CGGACTGGGGCTGGCAGCCACGGTTCGGCCTGCAGGAGATGGTCGACGACATGCTCGACAATCTGCGCAAGAGCTTCGCC
GTCGAGCTGGCCCCCGTAGCCCCGGTAGCGACAGCGGTTTGA

Upstream 100 bases:

>100_bases
CACGTATCCGCGTGCAGATGAGCGCTGTGCACGATGCGGTGACGCTGCAGTCCGCTCTTGATGCCTTCGGCCAGGCAGGC
CGTGAATTGGGGCTGATTCG

Downstream 100 bases:

>100_bases
AGCCGCCGTCGCAGGGGTCAACGCATACCGGTGGCGTCGGCGAACGATGAGAGTGTCCAGCCCTGGCCCAGCAGGATCAT
GCGAGTGTGCAGATCGGCTT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTAATTAVPKILIIGANGQLGSELALALAERHGREQVVTSDVVPTGRHVHIAHEMLNVTDRGELTTVIERHGITQIYLLA
AALSATGEKAPQWAWNLNMTGLLNVLEAARHHGIERVFWPSSIAAFGPTTPSIDTPQKTVMEPTTVYGISKQAGEGWCRW
YFENHGVDVRSVRYPGLISHKTPPGGGTTDYAVDIFHHAVRSEPYTCFLKEDERLPMMYMPDAIRATLELMEAPREQVRE
RGSYNLAAVSFTPAEIAAAIRLRVPEFEVHYAPDYRQAIAQGWPDSIDDSAARADWGWQPRFGLQEMVDDMLDNLRKSFA
VELAPVAPVATAV

Sequences:

>Translated_333_residues
MTAATTAVPKILIIGANGQLGSELALALAERHGREQVVTSDVVPTGRHVHIAHEMLNVTDRGELTTVIERHGITQIYLLA
AALSATGEKAPQWAWNLNMTGLLNVLEAARHHGIERVFWPSSIAAFGPTTPSIDTPQKTVMEPTTVYGISKQAGEGWCRW
YFENHGVDVRSVRYPGLISHKTPPGGGTTDYAVDIFHHAVRSEPYTCFLKEDERLPMMYMPDAIRATLELMEAPREQVRE
RGSYNLAAVSFTPAEIAAAIRLRVPEFEVHYAPDYRQAIAQGWPDSIDDSAARADWGWQPRFGLQEMVDDMLDNLRKSFA
VELAPVAPVATAV
>Mature_332_residues
TAATTAVPKILIIGANGQLGSELALALAERHGREQVVTSDVVPTGRHVHIAHEMLNVTDRGELTTVIERHGITQIYLLAA
ALSATGEKAPQWAWNLNMTGLLNVLEAARHHGIERVFWPSSIAAFGPTTPSIDTPQKTVMEPTTVYGISKQAGEGWCRWY
FENHGVDVRSVRYPGLISHKTPPGGGTTDYAVDIFHHAVRSEPYTCFLKEDERLPMMYMPDAIRATLELMEAPREQVRER
GSYNLAAVSFTPAEIAAAIRLRVPEFEVHYAPDYRQAIAQGWPDSIDDSAARADWGWQPRFGLQEMVDDMLDNLRKSFAV
ELAPVAPVATAV

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI32566934, Length=334, Percent_Identity=42.5149700598802, Blast_Score=255, Evalue=2e-68,
Organism=Drosophila melanogaster, GI24667531, Length=313, Percent_Identity=43.1309904153355, Blast_Score=266, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 36763; Mature: 36632

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAATTAVPKILIIGANGQLGSELALALAERHGREQVVTSDVVPTGRHVHIAHEMLNVTD
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEHHCCCCCCCEEEEHHHHHCCCC
RGELTTVIERHGITQIYLLAAALSATGEKAPQWAWNLNMTGLLNVLEAARHHGIERVFWP
CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEECC
SSIAAFGPTTPSIDTPQKTVMEPTTVYGISKQAGEGWCRWYFENHGVDVRSVRYPGLISH
CCHHHCCCCCCCCCCCHHHHCCCHHEEECCCCCCCCEEEEEECCCCCEEEEEECCCEECC
KTPPGGGTTDYAVDIFHHAVRSEPYTCFLKEDERLPMMYMPDAIRATLELMEAPREQVRE
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHCHHHHHHH
RGSYNLAAVSFTPAEIAAAIRLRVPEFEVHYAPDYRQAIAQGWPDSIDDSAARADWGWQP
CCCCEEEEEEECHHHHHHHHEEECCCEEEEECCHHHHHHHCCCCCCCCCCHHCCCCCCCC
RFGLQEMVDDMLDNLRKSFAVELAPVAPVATAV
CCCHHHHHHHHHHHHHHHHEEEECCCCCHHHCC
>Mature Secondary Structure 
TAATTAVPKILIIGANGQLGSELALALAERHGREQVVTSDVVPTGRHVHIAHEMLNVTD
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEHHCCCCCCCEEEEHHHHHCCCC
RGELTTVIERHGITQIYLLAAALSATGEKAPQWAWNLNMTGLLNVLEAARHHGIERVFWP
CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEECC
SSIAAFGPTTPSIDTPQKTVMEPTTVYGISKQAGEGWCRWYFENHGVDVRSVRYPGLISH
CCHHHCCCCCCCCCCCHHHHCCCHHEEECCCCCCCCEEEEEECCCCCEEEEEECCCEECC
KTPPGGGTTDYAVDIFHHAVRSEPYTCFLKEDERLPMMYMPDAIRATLELMEAPREQVRE
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHCHHHHHHH
RGSYNLAAVSFTPAEIAAAIRLRVPEFEVHYAPDYRQAIAQGWPDSIDDSAARADWGWQP
CCCCEEEEEEECHHHHHHHHEEECCCEEEEECCHHHHHHHCCCCCCCCCCHHCCCCCCCC
RFGLQEMVDDMLDNLRKSFAVELAPVAPVATAV
CCCHHHHHHHHHHHHHHHHEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA