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The map label for this gene is dan [H]

Identifier: 94313694

GI number: 94313694

Start: 1416470

End: 1417933

Strand: Direct

Name: dan [H]

Synonym: Rmet_4772

Alternate gene names: 94313694

Gene position: 1416470-1417933 (Clockwise)

Preceding gene: 94313693

Following gene: 94313695

Centisome position: 54.9

GC content: 67.14

Gene sequence:

>1464_bases
ATGCCACACCTGTTCGATACCCTGATCCGCTGCGTGCTGCTGCTCGATGGCTCGGGCGCCGCGGCGCGCCTGGCCGACGT
GGCGATCCGCGATGGCCGCATCGCCCGCATCGACGAGCCTGGCGCGATCGACCCCGATTCCGCGTCAAACGTCGTGGAAG
GTCACGGTCTGGTGCTCTCCCCCGGGTTCATCGATGTCCATACGCACGACGACACCAATGTCGTGCGTGAGCCGGCGATG
ACACCGAAGATCTCGCAAGGCGTGACCACTGTGGTCGTCGGAAACTGCGGCATCAGCGCCGCACCCGTCACGCTGGCCGG
TGATCCACCCGACCCGATGAACCTGCTGGGCCGCGCCGACGCGTTTCGCTACCCCGACTTCAAAACGTATGTGGCAGCCG
TCAACGCCGCGAAACCAGCCGTAAACGTGGCCGCACTGGTCGGCCATACCGCGCTGCGCAGCAATCATATGGACAGGCTC
GACAGGCCCGCGACCGAGGCCGAGACCGCCGCAATGCGCGGCCAGCTTCAGGAAGCCCTGGATCATGGCGCGCTTGGGCT
TTCCACCGGCCTGGCATATGCCAACGCATTCCACGCTCCCACCGACGAAGTGCTGGCGCTGGCCGAACCGCTGGCCAAGG
CAGGCGCGATCTACGCCACCCACTTGCGCAGCGAGTTCGCGGAGATTCTGGACGCGATGGACGAAGCCTTCCGCATCGGC
CGGCACGCGCGCGTGCCGGTGGTGATCTCGCACCTGAAATGCGCGGGCGTGTCGAACTGGGGCCGTAGCGGCGAGGTGCT
CGCCGCGCTCGAAGGCGCGGAGCGTTGGCAACCGGTTGGCTGCGACTGCTACCCCTACACCGCCAGTTCGTCGACACTCG
ATCTCAAGCAGGTCACCAACGACTTTGACATCCAGGTCACCTGGTCCGAGCCGCATCCCACGATGGGTGGCCGGCTGCTG
GCCGATATCGCCGCCGAGTGGAACGTCGACCTGCTTGAGGCGGCACGGCGCCTGCAGCCTGCCGGCGCCGTCTATCACTG
CATGGAGGATGCGGACGTCGATCGCATCCTGAGCCATCCTGCCACCGTGGTTGGGTCCGACGGGCTACCCAACGACCCGC
TACCGCATCCGCGCCTTTGGGGCGCATTTCCACGCGTGCTGGGCCACTACGCGCGCGATCGCGAACTGTTCCCGCTCGCG
GTGGCCGTCAACAAGATGACTGGCATGTCGGCCGAGCGCTTCGGCCTGACCGGTCGCGGCTTCGTGCGCGAAGGCTACTG
GGCCGATCTCGTTCTGTTCGACGCCGCCACGATCCGCGACGCGGCGAGCTTCACCGATCCGCAGCAACCGGCCGAAGGCA
TTGCGGCCGTCTGGGTCAACGGCGAGTTGACATGGCGGCAACGCGCCGCCACCGGCGTACGCGCCGGCCGCTTCCTGCCA
CGCGGCACCCAGCAACAACACTGA

Upstream 100 bases:

>100_bases
AGGAAAAGTTGCGCCGGCTGAAATACGTGCTGGATGCCCACCGAGGCGTCAGCCAGGACAGCGACGGGCCGGACAGCCGC
CAGCCGCTCGGAGACTGACA

Downstream 100 bases:

>100_bases
AAACAGGAGTTTCCATGGATATCAAACGATTCGGCGTCGAAGGTGGCACCGGCCAGGGCGGCTCGCACATGCCGTTCGCA
CGCGCCGTGCAAGCGGACGG

Product: D-aminoacylase

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MPHLFDTLIRCVLLLDGSGAAARLADVAIRDGRIARIDEPGAIDPDSASNVVEGHGLVLSPGFIDVHTHDDTNVVREPAM
TPKISQGVTTVVVGNCGISAAPVTLAGDPPDPMNLLGRADAFRYPDFKTYVAAVNAAKPAVNVAALVGHTALRSNHMDRL
DRPATEAETAAMRGQLQEALDHGALGLSTGLAYANAFHAPTDEVLALAEPLAKAGAIYATHLRSEFAEILDAMDEAFRIG
RHARVPVVISHLKCAGVSNWGRSGEVLAALEGAERWQPVGCDCYPYTASSSTLDLKQVTNDFDIQVTWSEPHPTMGGRLL
ADIAAEWNVDLLEAARRLQPAGAVYHCMEDADVDRILSHPATVVGSDGLPNDPLPHPRLWGAFPRVLGHYARDRELFPLA
VAVNKMTGMSAERFGLTGRGFVREGYWADLVLFDAATIRDAASFTDPQQPAEGIAAVWVNGELTWRQRAATGVRAGRFLP
RGTQQQH

Sequences:

>Translated_487_residues
MPHLFDTLIRCVLLLDGSGAAARLADVAIRDGRIARIDEPGAIDPDSASNVVEGHGLVLSPGFIDVHTHDDTNVVREPAM
TPKISQGVTTVVVGNCGISAAPVTLAGDPPDPMNLLGRADAFRYPDFKTYVAAVNAAKPAVNVAALVGHTALRSNHMDRL
DRPATEAETAAMRGQLQEALDHGALGLSTGLAYANAFHAPTDEVLALAEPLAKAGAIYATHLRSEFAEILDAMDEAFRIG
RHARVPVVISHLKCAGVSNWGRSGEVLAALEGAERWQPVGCDCYPYTASSSTLDLKQVTNDFDIQVTWSEPHPTMGGRLL
ADIAAEWNVDLLEAARRLQPAGAVYHCMEDADVDRILSHPATVVGSDGLPNDPLPHPRLWGAFPRVLGHYARDRELFPLA
VAVNKMTGMSAERFGLTGRGFVREGYWADLVLFDAATIRDAASFTDPQQPAEGIAAVWVNGELTWRQRAATGVRAGRFLP
RGTQQQH
>Mature_486_residues
PHLFDTLIRCVLLLDGSGAAARLADVAIRDGRIARIDEPGAIDPDSASNVVEGHGLVLSPGFIDVHTHDDTNVVREPAMT
PKISQGVTTVVVGNCGISAAPVTLAGDPPDPMNLLGRADAFRYPDFKTYVAAVNAAKPAVNVAALVGHTALRSNHMDRLD
RPATEAETAAMRGQLQEALDHGALGLSTGLAYANAFHAPTDEVLALAEPLAKAGAIYATHLRSEFAEILDAMDEAFRIGR
HARVPVVISHLKCAGVSNWGRSGEVLAALEGAERWQPVGCDCYPYTASSSTLDLKQVTNDFDIQVTWSEPHPTMGGRLLA
DIAAEWNVDLLEAARRLQPAGAVYHCMEDADVDRILSHPATVVGSDGLPNDPLPHPRLWGAFPRVLGHYARDRELFPLAV
AVNKMTGMSAERFGLTGRGFVREGYWADLVLFDAATIRDAASFTDPQQPAEGIAAVWVNGELTWRQRAATGVRAGRFLPR
GTQQQH

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 52220; Mature: 52088

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHLFDTLIRCVLLLDGSGAAARLADVAIRDGRIARIDEPGAIDPDSASNVVEGHGLVLS
CCHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEECCCCEEEC
PGFIDVHTHDDTNVVREPAMTPKISQGVTTVVVGNCGISAAPVTLAGDPPDPMNLLGRAD
CCEEEEEECCCCHHHHCCCCCCCHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHHCCCC
AFRYPDFKTYVAAVNAAKPAVNVAALVGHTALRSNHMDRLDRPATEAETAAMRGQLQEAL
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHH
DHGALGLSTGLAYANAFHAPTDEVLALAEPLAKAGAIYATHLRSEFAEILDAMDEAFRIG
HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
RHARVPVVISHLKCAGVSNWGRSGEVLAALEGAERWQPVGCDCYPYTASSSTLDLKQVTN
CCCCCCCEEEHHHHCCCCCCCCCCCEEEEECCHHHCCCCCCCEECCCCCCCCEEHHHCCC
DFDIQVTWSEPHPTMGGRLLADIAAEWNVDLLEAARRLQPAGAVYHCMEDADVDRILSHP
CCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHCC
ATVVGSDGLPNDPLPHPRLWGAFPRVLGHYARDRELFPLAVAVNKMTGMSAERFGLTGRG
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHEEEHHHHCCCCHHHCCCCCCC
FVREGYWADLVLFDAATIRDAASFTDPQQPAEGIAAVWVNGELTWRQRAATGVRAGRFLP
CCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEHHHHHHHHHHCCCCC
RGTQQQH
CCCCCCC
>Mature Secondary Structure 
PHLFDTLIRCVLLLDGSGAAARLADVAIRDGRIARIDEPGAIDPDSASNVVEGHGLVLS
CHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEECCCCEEEC
PGFIDVHTHDDTNVVREPAMTPKISQGVTTVVVGNCGISAAPVTLAGDPPDPMNLLGRAD
CCEEEEEECCCCHHHHCCCCCCCHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHHCCCC
AFRYPDFKTYVAAVNAAKPAVNVAALVGHTALRSNHMDRLDRPATEAETAAMRGQLQEAL
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHH
DHGALGLSTGLAYANAFHAPTDEVLALAEPLAKAGAIYATHLRSEFAEILDAMDEAFRIG
HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
RHARVPVVISHLKCAGVSNWGRSGEVLAALEGAERWQPVGCDCYPYTASSSTLDLKQVTN
CCCCCCCEEEHHHHCCCCCCCCCCCEEEEECCHHHCCCCCCCEECCCCCCCCEEHHHCCC
DFDIQVTWSEPHPTMGGRLLADIAAEWNVDLLEAARRLQPAGAVYHCMEDADVDRILSHP
CCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHCC
ATVVGSDGLPNDPLPHPRLWGAFPRVLGHYARDRELFPLAVAVNKMTGMSAERFGLTGRG
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHEEEHHHHCCCCHHHCCCCCCC
FVREGYWADLVLFDAATIRDAASFTDPQQPAEGIAAVWVNGELTWRQRAATGVRAGRFLP
CCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEHHHHHHHHHHCCCCC
RGTQQQH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]