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The map label for this gene is ytfL [C]

Identifier: 94313687

GI number: 94313687

Start: 1408978

End: 1410291

Strand: Direct

Name: ytfL [C]

Synonym: Rmet_4765

Alternate gene names: 94313687

Gene position: 1408978-1410291 (Clockwise)

Preceding gene: 94313686

Following gene: 94313688

Centisome position: 54.61

GC content: 63.62

Gene sequence:

>1314_bases
ATGGAAATTGCCATACTTTTGGCGCTCATTCTGCTGAACGGGCTGTTCGCCATGTCCGAAATCGCGCTTGTGACGGCTCG
CAAGGCCCGCCTTCAGCGCCATATCGACGAAGGCGACCGGGGCGCCATGGCTGCCGTGAAACTGGGCGAGGACCCTACCC
GTTTCCTCTCGACTGTCCAGATCGGCATTACGTCGATCGGCGTGCTGAACGGCGTGGTTGGTGAATCCACGCTGGCGGCG
CCACTTGGCGTATGGCTTCAGGGATTTGGTATTTCGGCCACTACTGCTGGATACGTTGCCACCGCGATCGTGGTGGCCGG
CCTGACCTATTTCTCCATCGTGCTGGGCGAACTCGTGCCCAAGCGGCTGGGTCAGCTTGCGCCGGAAGCGATCGCCCGGA
TGGCCGCCCGCCCGATTTCGTTCCTCGCCGTTGCCTCCACCCCCTTCGTCAAGCTGCTGTCGAGCTCTACCCGCCTCGTG
CTGCGCCTGCTTGGTGTGAAAACCAATCGCGGCCCGGCAGTTACCGAGGAGGAAATCCACGCGCTACTGGTGGAAGGCTC
GGAGGCCGGCATCATCGAGCAGCAGGAGCACACGATGGTGCGCAACGTGTTCCGCCTCGACGACCGCCAACTCGCTTCGC
TGATGGTGCCCCGTGGCGATGTGGTCTATCTGGATGTCGAGGAGAGCGAGGACGAGAACCTGCGCCGCATCGAGGAATCG
GACCACGCCCGCTTTCCGGTGGTACGCGGCGGGATGCACGACATTCTCGGCGTAGTCAGCGCCCGGCAAATGCTGGCCAA
GCGCCTGCGCGGCGAAAAGGCCGAGCTGACAGCCGTGCTGCAGCCGGCGGTATTTGTGCCCGAAAGCGTGACCGGCATGG
AACTGCTCGAGAACTTCCGCTCGTCCGGCGGGCAAGTTGCCTTCGTAATCGACGAGTACGGCGAAGTACTGGGCCTCGTC
ACACTCCAGGATCTCGTGGAAGCGATCACCGGCGAGTTCAAGCCGGATGCGGCCGGCGACGAATGGGCCGTGCAGCGCGA
CGACGGATCATGGCTGTTGGACGGACTGATCCCGATTCCCGAACTCAAGGACCGCATCGGCCTGCGGGCGGTGCCGGAAG
AGGCCAAGGAGCGTTATCACACGCTATCAGGCATGCTCCTGTTGCTTCTGGGTCGACTGCCGCAAACCACCGACGCCGTG
CAGTGGGAGGACTGGAAGTTCGAGATTGTCGACATGGACGGCAAGCGCATCGACAAGGTGCTGGCCTCCCGCGTGCCGGC
GGAGGACGGCCCCGAGCCCGATACCACCGGCTGA

Upstream 100 bases:

>100_bases
ACCACGACAGTGATGCTTACGCCACCAAGGCCGTACCCCGTCACATGCCGATGGTATGCTCTGACTTTTCAATTCCCGCG
CGCACAGGGCGCGCACCCTG

Downstream 100 bases:

>100_bases
TCGGCAATACTGATCGGCAATACCTGACCGGTACCGATCATTTCGATTGATCGATCAAAACGGACACTTCGGTGTCCGTT
TTCACTTGTTTCAAGCCGAG

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MEIAILLALILLNGLFAMSEIALVTARKARLQRHIDEGDRGAMAAVKLGEDPTRFLSTVQIGITSIGVLNGVVGESTLAA
PLGVWLQGFGISATTAGYVATAIVVAGLTYFSIVLGELVPKRLGQLAPEAIARMAARPISFLAVASTPFVKLLSSSTRLV
LRLLGVKTNRGPAVTEEEIHALLVEGSEAGIIEQQEHTMVRNVFRLDDRQLASLMVPRGDVVYLDVEESEDENLRRIEES
DHARFPVVRGGMHDILGVVSARQMLAKRLRGEKAELTAVLQPAVFVPESVTGMELLENFRSSGGQVAFVIDEYGEVLGLV
TLQDLVEAITGEFKPDAAGDEWAVQRDDGSWLLDGLIPIPELKDRIGLRAVPEEAKERYHTLSGMLLLLLGRLPQTTDAV
QWEDWKFEIVDMDGKRIDKVLASRVPAEDGPEPDTTG

Sequences:

>Translated_437_residues
MEIAILLALILLNGLFAMSEIALVTARKARLQRHIDEGDRGAMAAVKLGEDPTRFLSTVQIGITSIGVLNGVVGESTLAA
PLGVWLQGFGISATTAGYVATAIVVAGLTYFSIVLGELVPKRLGQLAPEAIARMAARPISFLAVASTPFVKLLSSSTRLV
LRLLGVKTNRGPAVTEEEIHALLVEGSEAGIIEQQEHTMVRNVFRLDDRQLASLMVPRGDVVYLDVEESEDENLRRIEES
DHARFPVVRGGMHDILGVVSARQMLAKRLRGEKAELTAVLQPAVFVPESVTGMELLENFRSSGGQVAFVIDEYGEVLGLV
TLQDLVEAITGEFKPDAAGDEWAVQRDDGSWLLDGLIPIPELKDRIGLRAVPEEAKERYHTLSGMLLLLLGRLPQTTDAV
QWEDWKFEIVDMDGKRIDKVLASRVPAEDGPEPDTTG
>Mature_437_residues
MEIAILLALILLNGLFAMSEIALVTARKARLQRHIDEGDRGAMAAVKLGEDPTRFLSTVQIGITSIGVLNGVVGESTLAA
PLGVWLQGFGISATTAGYVATAIVVAGLTYFSIVLGELVPKRLGQLAPEAIARMAARPISFLAVASTPFVKLLSSSTRLV
LRLLGVKTNRGPAVTEEEIHALLVEGSEAGIIEQQEHTMVRNVFRLDDRQLASLMVPRGDVVYLDVEESEDENLRRIEES
DHARFPVVRGGMHDILGVVSARQMLAKRLRGEKAELTAVLQPAVFVPESVTGMELLENFRSSGGQVAFVIDEYGEVLGLV
TLQDLVEAITGEFKPDAAGDEWAVQRDDGSWLLDGLIPIPELKDRIGLRAVPEEAKERYHTLSGMLLLLLGRLPQTTDAV
QWEDWKFEIVDMDGKRIDKVLASRVPAEDGPEPDTTG

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=382, Percent_Identity=29.3193717277487, Blast_Score=164, Evalue=1e-40,
Organism=Escherichia coli, GI1790664, Length=428, Percent_Identity=30.3738317757009, Blast_Score=258, Evalue=4e-70,
Organism=Escherichia coli, GI145693175, Length=414, Percent_Identity=27.7777777777778, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI87082033, Length=341, Percent_Identity=31.9648093841642, Blast_Score=141, Evalue=7e-35,
Organism=Escherichia coli, GI1786879, Length=282, Percent_Identity=28.7234042553192, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788119, Length=396, Percent_Identity=28.5353535353535, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47468; Mature: 47468

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIAILLALILLNGLFAMSEIALVTARKARLQRHIDEGDRGAMAAVKLGEDPTRFLSTVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHH
IGITSIGVLNGVVGESTLAAPLGVWLQGFGISATTAGYVATAIVVAGLTYFSIVLGELVP
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLGQLAPEAIARMAARPISFLAVASTPFVKLLSSSTRLVLRLLGVKTNRGPAVTEEEIH
HHHHHCCHHHHHHHHHCCHHHEEECCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHH
ALLVEGSEAGIIEQQEHTMVRNVFRLDDRQLASLMVPRGDVVYLDVEESEDENLRRIEES
EEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC
DHARFPVVRGGMHDILGVVSARQMLAKRLRGEKAELTAVLQPAVFVPESVTGMELLENFR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCHHHHHHHHHH
SSGGQVAFVIDEYGEVLGLVTLQDLVEAITGEFKPDAAGDEWAVQRDDGSWLLDGLIPIP
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCCCCCH
ELKDRIGLRAVPEEAKERYHTLSGMLLLLLGRLPQTTDAVQWEDWKFEIVDMDGKRIDKV
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCHHHHHH
LASRVPAEDGPEPDTTG
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEIAILLALILLNGLFAMSEIALVTARKARLQRHIDEGDRGAMAAVKLGEDPTRFLSTVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHH
IGITSIGVLNGVVGESTLAAPLGVWLQGFGISATTAGYVATAIVVAGLTYFSIVLGELVP
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLGQLAPEAIARMAARPISFLAVASTPFVKLLSSSTRLVLRLLGVKTNRGPAVTEEEIH
HHHHHCCHHHHHHHHHCCHHHEEECCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHH
ALLVEGSEAGIIEQQEHTMVRNVFRLDDRQLASLMVPRGDVVYLDVEESEDENLRRIEES
EEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC
DHARFPVVRGGMHDILGVVSARQMLAKRLRGEKAELTAVLQPAVFVPESVTGMELLENFR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCHHHHHHHHHH
SSGGQVAFVIDEYGEVLGLVTLQDLVEAITGEFKPDAAGDEWAVQRDDGSWLLDGLIPIP
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCCCCCH
ELKDRIGLRAVPEEAKERYHTLSGMLLLLLGRLPQTTDAVQWEDWKFEIVDMDGKRIDKV
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCHHHHHH
LASRVPAEDGPEPDTTG
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]