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The map label for this gene is yxjC [H]

Identifier: 94313613

GI number: 94313613

Start: 1326734

End: 1328191

Strand: Direct

Name: yxjC [H]

Synonym: Rmet_4691

Alternate gene names: 94313613

Gene position: 1326734-1328191 (Clockwise)

Preceding gene: 94313612

Following gene: 94313615

Centisome position: 51.42

GC content: 68.86

Gene sequence:

>1458_bases
ATGGGTCTCCTTGGCATCGTCATCGCCCTGGGGGCGATGATCTGGCTCGCGTTTCGCGGCTGGAGCATCCTGATCATCGC
GCCGGCGGCGGCCCTGCTGGCCGCGGCCACGGCGGGCGAACCGCTGCTGGCTCACTGGACCCAGACCTTCATGGGCACGG
CGGCGGGGTTCGTCGCCCAGTTCTTCCCGTTGTTCCTGCTCGGCGCCCTGTTCGGCAAGCTGATGGACGACAGCGGCTCC
GTCACGGCCATCGCCGAATGGATGACGCGCGTGCTCGGTCCCCAGCGTGCGATGCTGGCCGTGGTGCTTGCGGGCGCGCT
GCTGACCTACGGCGGCGTGAGCCTGTTCGTGGCGTTCTTTGTGCTGGCGCCGATGGCGCACGCGCTGTTTCGCGCGGCGG
ACATCCCGCCACGCCTGATGCCCGCCGCCATCGTACTGGGTACGTCGACGTTCACGATGTCGGCGCTGCCGGGAACGCCG
GCGATCCAGAACGCGATTCCCATGCCGTTCTTCAGCACCACGCCGTTCGCCGCGCCCGGCCTGGGTATCGTGGCCAGCGC
GATCATGCTGACGTTCGGGCTGTGGTGGCTGTCGCAGCGCGAGAACGCTGCGCGCCGCAGGGGCGAGGGTTACGCCATTG
CCGAGGAGGAGGCTTCGCCCGATGAGGTGGCGGAGCGCCCGCTGATCCGTGAGCTTGCCAGTACCGCACGCGAATTCGAC
CCGGCCGAGGCGCTGCAAGGCAGTCGCAGCGACGAGCCGCCAGCAGCCTTTATCGCGCTGCTGCCGCTGGCCGTGGTGAT
CGTGGTGAACCTGCTCATGAGCTTCGTGGTGCTGCCACGGGTGGATGCCGACTACCTCGGCCTGCCCGAGTGGGGCGCGA
CCACGCTGCAGGCAGTCAGCGGCGTGTGGTCCGTTATCGTCGCACTGACCGCTGCCATTCTCTGCCTGATTGCGCTGAAT
TTCCGGCGCCTGCCGGAGCTGCGCGACAGCATGGGGGCTGGCGCTCACGCCGCCGCCCTGCCGGTGCTCAGCGTGGCCAG
TCTGGTGGGATTCGGCGCGGTGGTCGCCAGCCTGCCCGGGTTCGGCGTCGTGCGGGACTGGGTATTGTCGATCGAGGGAG
GCCCGCTCGTGTCGCTGGCCGTGGCAACAAACGTATTGTCGGCGCTGACCGGCTCCGCCTCTGGCGGCCTGACCATTGCG
CTCGATGCGCTGGGTGGCACCTACCTGACACGTGCCTTCGACCTGGGCATCGATCCCGCCATCCTGCATCGCGTGGCCGT
GATGAGCGCTGGCACACTCGACACGCTGCCGCACAACGGGGCCGTGGTCACGCTGCTGGCCGTATGCGGCGCCACGCATC
GGGAAAGCTACGGCGGCATCGTGATGGTGGGGATCGTCGGCCCGATGCTGGCGCTGGCGGCGGTGATCGCGCTGGGGAGT
TGGGTTGGGTCGTTCTGA

Upstream 100 bases:

>100_bases
AGGGCGTGAAGCGGCTGCGCAATTCCTGGCCGAGCACGGCGACGCGCTCGGTCAGCGCTCTTCGTTCAATCTCGACGAAC
TGCTCGAGGAGATCTGAACC

Downstream 100 bases:

>100_bases
AGCCTGATGAACCAAAGCCCGATGAACCGAGGGGTCAGGCGGCCCCCTCCCCGCCGACCTGGGGCTGCACGATGCCCATC
CGGCGCGCGGCCAGCTTCAT

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MGLLGIVIALGAMIWLAFRGWSILIIAPAAALLAAATAGEPLLAHWTQTFMGTAAGFVAQFFPLFLLGALFGKLMDDSGS
VTAIAEWMTRVLGPQRAMLAVVLAGALLTYGGVSLFVAFFVLAPMAHALFRAADIPPRLMPAAIVLGTSTFTMSALPGTP
AIQNAIPMPFFSTTPFAAPGLGIVASAIMLTFGLWWLSQRENAARRRGEGYAIAEEEASPDEVAERPLIRELASTAREFD
PAEALQGSRSDEPPAAFIALLPLAVVIVVNLLMSFVVLPRVDADYLGLPEWGATTLQAVSGVWSVIVALTAAILCLIALN
FRRLPELRDSMGAGAHAAALPVLSVASLVGFGAVVASLPGFGVVRDWVLSIEGGPLVSLAVATNVLSALTGSASGGLTIA
LDALGGTYLTRAFDLGIDPAILHRVAVMSAGTLDTLPHNGAVVTLLAVCGATHRESYGGIVMVGIVGPMLALAAVIALGS
WVGSF

Sequences:

>Translated_485_residues
MGLLGIVIALGAMIWLAFRGWSILIIAPAAALLAAATAGEPLLAHWTQTFMGTAAGFVAQFFPLFLLGALFGKLMDDSGS
VTAIAEWMTRVLGPQRAMLAVVLAGALLTYGGVSLFVAFFVLAPMAHALFRAADIPPRLMPAAIVLGTSTFTMSALPGTP
AIQNAIPMPFFSTTPFAAPGLGIVASAIMLTFGLWWLSQRENAARRRGEGYAIAEEEASPDEVAERPLIRELASTAREFD
PAEALQGSRSDEPPAAFIALLPLAVVIVVNLLMSFVVLPRVDADYLGLPEWGATTLQAVSGVWSVIVALTAAILCLIALN
FRRLPELRDSMGAGAHAAALPVLSVASLVGFGAVVASLPGFGVVRDWVLSIEGGPLVSLAVATNVLSALTGSASGGLTIA
LDALGGTYLTRAFDLGIDPAILHRVAVMSAGTLDTLPHNGAVVTLLAVCGATHRESYGGIVMVGIVGPMLALAAVIALGS
WVGSF
>Mature_484_residues
GLLGIVIALGAMIWLAFRGWSILIIAPAAALLAAATAGEPLLAHWTQTFMGTAAGFVAQFFPLFLLGALFGKLMDDSGSV
TAIAEWMTRVLGPQRAMLAVVLAGALLTYGGVSLFVAFFVLAPMAHALFRAADIPPRLMPAAIVLGTSTFTMSALPGTPA
IQNAIPMPFFSTTPFAAPGLGIVASAIMLTFGLWWLSQRENAARRRGEGYAIAEEEASPDEVAERPLIRELASTAREFDP
AEALQGSRSDEPPAAFIALLPLAVVIVVNLLMSFVVLPRVDADYLGLPEWGATTLQAVSGVWSVIVALTAAILCLIALNF
RRLPELRDSMGAGAHAAALPVLSVASLVGFGAVVASLPGFGVVRDWVLSIEGGPLVSLAVATNVLSALTGSASGGLTIAL
DALGGTYLTRAFDLGIDPAILHRVAVMSAGTLDTLPHNGAVVTLLAVCGATHRESYGGIVMVGIVGPMLALAAVIALGSW
VGSF

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 50088; Mature: 49956

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLGIVIALGAMIWLAFRGWSILIIAPAAALLAAATAGEPLLAHWTQTFMGTAAGFVAQ
CCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
FFPLFLLGALFGKLMDDSGSVTAIAEWMTRVLGPQRAMLAVVLAGALLTYGGVSLFVAFF
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHH
VLAPMAHALFRAADIPPRLMPAAIVLGTSTFTMSALPGTPAIQNAIPMPFFSTTPFAAPG
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHEEECCCCCCHHHHCCCCCCCCCCCCCCCC
LGIVASAIMLTFGLWWLSQRENAARRRGEGYAIAEEEASPDEVAERPLIRELASTAREFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC
PAEALQGSRSDEPPAAFIALLPLAVVIVVNLLMSFVVLPRVDADYLGLPEWGATTLQAVS
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
GVWSVIVALTAAILCLIALNFRRLPELRDSMGAGAHAAALPVLSVASLVGFGAVVASLPG
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
FGVVRDWVLSIEGGPLVSLAVATNVLSALTGSASGGLTIALDALGGTYLTRAFDLGIDPA
CHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCHH
ILHRVAVMSAGTLDTLPHNGAVVTLLAVCGATHRESYGGIVMVGIVGPMLALAAVIALGS
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
WVGSF
HHCCC
>Mature Secondary Structure 
GLLGIVIALGAMIWLAFRGWSILIIAPAAALLAAATAGEPLLAHWTQTFMGTAAGFVAQ
CHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
FFPLFLLGALFGKLMDDSGSVTAIAEWMTRVLGPQRAMLAVVLAGALLTYGGVSLFVAFF
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHH
VLAPMAHALFRAADIPPRLMPAAIVLGTSTFTMSALPGTPAIQNAIPMPFFSTTPFAAPG
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHEEECCCCCCHHHHCCCCCCCCCCCCCCCC
LGIVASAIMLTFGLWWLSQRENAARRRGEGYAIAEEEASPDEVAERPLIRELASTAREFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC
PAEALQGSRSDEPPAAFIALLPLAVVIVVNLLMSFVVLPRVDADYLGLPEWGATTLQAVS
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
GVWSVIVALTAAILCLIALNFRRLPELRDSMGAGAHAAALPVLSVASLVGFGAVVASLPG
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
FGVVRDWVLSIEGGPLVSLAVATNVLSALTGSASGGLTIALDALGGTYLTRAFDLGIDPA
CHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCHH
ILHRVAVMSAGTLDTLPHNGAVVTLLAVCGATHRESYGGIVMVGIVGPMLALAAVIALGS
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
WVGSF
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 10568751 [H]