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The map label for this gene is 94313558

Identifier: 94313558

GI number: 94313558

Start: 1267067

End: 1267939

Strand: Reverse

Name: 94313558

Synonym: Rmet_4636

Alternate gene names: NA

Gene position: 1267939-1267067 (Counterclockwise)

Preceding gene: 94313562

Following gene: 94313557

Centisome position: 49.14

GC content: 66.21

Gene sequence:

>873_bases
ATGCCCCCCTGGTTCGCCAAGCTCGCCGGCACACTCGGTTGCGCCCTGATGCTTCTGACCGGCCCAGCCGGAGCCGCAGG
CGCAGCCGACCCCGCCACACTGACCATCGTGTCCGGCCCGCAGGAGCGAAGCTGGACACGCCAGGAACTGCTCAAGGATC
GCCGTCTTGTGTCGGTAACCGTGGACGATGACAACCTCAAGCGGCGCCTGACCTTCAAGGCCATCCCGCTGGCGGCGCTG
TTGCACGGCTTGCCGGTTGCCGCCGATGCCACAGCCACGACCGCTGCCAGCGACGGGTATATTTCCCACCTGCCGGTGCG
GCTGCTGATTGCCGATGGCGCAGATACCCCGCGCGCGTGGCTCGCTGTGGAAAATCCGGCTGCGCCGTGGCCGAAGCTCA
AAGGGCAGGACATCGGGCCGTTCCGGCTGATCTGGACCGTGCCAAAGGGGCACGCCCATAACAAGATCAGCGAGAGCAGC
GAGATCAACGAAAGTCTCTGGACCTACAGCATCGTCCGGATCGACGTGACCGTATCGCCGGCCGAGCGCTTCGCCGCCAT
CCGGCCGGCGGCGGACCTGCCAGCCGACAGCCCGGTGGTGCGTGGCTTCGCCACCTTCCAGCGAGTCTGTTTTTCCTGCC
ACTCGATGAACCGAATGGGCGACGCCACGCTGGGGCCGGACCTGAACGTGCCGAACAGCGCCGTGGAGTACCTGGGCGAC
GAAAAGTTGAGCGCGCTGATCCGCGACCCGCAATCGCTACGCTGGTGGCCGGGCTCGCGCATGTCGTCGATCGACCAGAG
AACCCTGTCCGATGCCGACCTGAAGGACCTGCTGGCCTATCTGCATCACATGGCCGGGCGAAAGGCGCCATGA

Upstream 100 bases:

>100_bases
TATGGCCTCCATTTGCTTGTGCGTGCACAGCACTCCAGCACGCCGCCATACGCTAGACTCCCGACACCGCCCAACTGACA
ATTCGCCCCCCGGAGACCCC

Downstream 100 bases:

>100_bases
GGATGGAAAAAAGAGGGGCCTGACTTGCCGGGCGCATGGGGCTACCATGCGTCAGATACGCACCCGCGGGAAAAACAACA
AAGGGAATCGTGACCACGAC

Product: putative cytochrome c

Products: NA

Alternate protein names: Cytochrome C; Cytochrome C Family Protein; Cytochrome C-Like Protein; Cytochrome; Signal Peptide Protein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPPWFAKLAGTLGCALMLLTGPAGAAGAADPATLTIVSGPQERSWTRQELLKDRRLVSVTVDDDNLKRRLTFKAIPLAAL
LHGLPVAADATATTAASDGYISHLPVRLLIADGADTPRAWLAVENPAAPWPKLKGQDIGPFRLIWTVPKGHAHNKISESS
EINESLWTYSIVRIDVTVSPAERFAAIRPAADLPADSPVVRGFATFQRVCFSCHSMNRMGDATLGPDLNVPNSAVEYLGD
EKLSALIRDPQSLRWWPGSRMSSIDQRTLSDADLKDLLAYLHHMAGRKAP

Sequences:

>Translated_290_residues
MPPWFAKLAGTLGCALMLLTGPAGAAGAADPATLTIVSGPQERSWTRQELLKDRRLVSVTVDDDNLKRRLTFKAIPLAAL
LHGLPVAADATATTAASDGYISHLPVRLLIADGADTPRAWLAVENPAAPWPKLKGQDIGPFRLIWTVPKGHAHNKISESS
EINESLWTYSIVRIDVTVSPAERFAAIRPAADLPADSPVVRGFATFQRVCFSCHSMNRMGDATLGPDLNVPNSAVEYLGD
EKLSALIRDPQSLRWWPGSRMSSIDQRTLSDADLKDLLAYLHHMAGRKAP
>Mature_289_residues
PPWFAKLAGTLGCALMLLTGPAGAAGAADPATLTIVSGPQERSWTRQELLKDRRLVSVTVDDDNLKRRLTFKAIPLAALL
HGLPVAADATATTAASDGYISHLPVRLLIADGADTPRAWLAVENPAAPWPKLKGQDIGPFRLIWTVPKGHAHNKISESSE
INESLWTYSIVRIDVTVSPAERFAAIRPAADLPADSPVVRGFATFQRVCFSCHSMNRMGDATLGPDLNVPNSAVEYLGDE
KLSALIRDPQSLRWWPGSRMSSIDQRTLSDADLKDLLAYLHHMAGRKAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31412; Mature: 31281

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPWFAKLAGTLGCALMLLTGPAGAAGAADPATLTIVSGPQERSWTRQELLKDRRLVSVT
CCCHHHHHHHHHHHEEHEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCEEEEEE
VDDDNLKRRLTFKAIPLAALLHGLPVAADATATTAASDGYISHLPVRLLIADGADTPRAW
ECCCCCHHEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCEEEEEECCCCCCCEE
LAVENPAAPWPKLKGQDIGPFRLIWTVPKGHAHNKISESSEINESLWTYSIVRIDVTVSP
EEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHEEEEEEEEEEECC
AERFAAIRPAADLPADSPVVRGFATFQRVCFSCHSMNRMGDATLGPDLNVPNSAVEYLGD
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCH
EKLSALIRDPQSLRWWPGSRMSSIDQRTLSDADLKDLLAYLHHMAGRKAP
HHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PPWFAKLAGTLGCALMLLTGPAGAAGAADPATLTIVSGPQERSWTRQELLKDRRLVSVT
CCHHHHHHHHHHHEEHEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCEEEEEE
VDDDNLKRRLTFKAIPLAALLHGLPVAADATATTAASDGYISHLPVRLLIADGADTPRAW
ECCCCCHHEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCEEEEEECCCCCCCEE
LAVENPAAPWPKLKGQDIGPFRLIWTVPKGHAHNKISESSEINESLWTYSIVRIDVTVSP
EEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHEEEEEEEEEEECC
AERFAAIRPAADLPADSPVVRGFATFQRVCFSCHSMNRMGDATLGPDLNVPNSAVEYLGD
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCH
EKLSALIRDPQSLRWWPGSRMSSIDQRTLSDADLKDLLAYLHHMAGRKAP
HHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA