Click here to switch to the map view.

The map label for this gene is bbsG [H]

Identifier: 94313535

GI number: 94313535

Start: 1238913

End: 1240106

Strand: Reverse

Name: bbsG [H]

Synonym: Rmet_4613

Alternate gene names: 94313535

Gene position: 1240106-1238913 (Counterclockwise)

Preceding gene: 94313536

Following gene: 94313534

Centisome position: 48.06

GC content: 66.83

Gene sequence:

>1194_bases
ATGTTCACACCCTGTCCCACCGAACGCAGCCGCGACATCGCGGATCGCGTCGAGCGCTTCGTGCGCGACGTGGTCGCGCC
GTACGAACAAGATCCGCGCTGCAGCGCTCACGGCCCCACCGAGGAACTGGTGCTGGAGCTTCGCGCCAAGGCACGTGCCG
CTGGCATCATGACGCCCCACATCCTGCCCGACGGCGGGCACCTGAGCCAACTCGAGACCGCCGCCGTGCTCAAGCGCTCG
GGCCTGTCGCCGCTTGGTCCGGTCGCCGTCAACACCATGGCGCCCGACGAGGGCAACATGTTCCTGCTCGGCAAGGTGGC
CACCGCCGCGCAGAAGGCGCGGTTTCTTGAGCCACTGGTGCGCGGCGAGGCACGCTCGGCGTTCTTCATGACCGAACCGG
CGGAAGAGGGCGGGGCGGGATCGGACCCCTCGATGCTGAGCACCACGGCAGTACGCGACGGCAACGACTGGGTACTCAAC
GGTCGCAAGAAGTTCATCACCGGCGCCGAGGGTGCCCGGGTGGGCATCGTGATGGCGCGTACCGGCGACGGCGAGCGCGC
GCAAGCCACCATGTTTCTGGTCGACCTTCCGCATCCCGCCATCCGCACCGAGCGCGTGATCGACACAATCGACAGTTCGA
TGCCCGGCGGCCACGCGCAAGTGCTCATCGATGGATTGCGCCTGCCGGCCGATCAGGTGCTGGGCGAGGTCAACGAAGGG
TTCCGCTATGCGCAGGTACGGCTGTCACCGGCCCGGCTTTCTCACTGCATGCGCTGGTTCGGCACGGTCACGCGCGCGGA
CGAGATCGCGCGGGCCTATGCCACCACGCGCAAAGCGTTCGGCAAGCTGCTGATCGACCACGAGGGCGTGGGCTTCATGC
TGGCCGATAACCTGATCGACCTGCAGCAGGCGGCGCTGATGATCGACTGGTGCGCGGGTGTGCTCGACACCGGCTCGGCT
GGCACGACGGAAAGCTCGATGGCGAAGGTGGCCGTCTCCGAGGCGCTGTTCCGTGTGGCGGACCGCTGCGTGCAGATTCT
GGGCGGCAATGGCGTTTCCCGCGACACTATCGTCGACCAGGCCTTCCGCGAGTTGCGTGCGTTCCGGATCTACGACGGCC
CGACTGAAGTCCACAAGTGGTCGCTGGCAAAGAAGATCAAGCGCGACACGCTGCAATCGTCGCACCATGGCTGA

Upstream 100 bases:

>100_bases
TGTTGCTGCTGGCATCCGATGCCTCGCGCTACATGACGGGCGCTGTGCTGCCGGTCGACGGCGGGCATCTGGTCAATACA
CTTTGAGAGGAATGGCATTC

Downstream 100 bases:

>100_bases
GCGCATGGGTGACGCCATGGCGGCCCGCTAGGCCCATCGCATCATGGCGACGCGATCCTCCCCGGTCCAGCGCGCGCTTG
CCGTGCTGCGGGCGCTCTCC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MFTPCPTERSRDIADRVERFVRDVVAPYEQDPRCSAHGPTEELVLELRAKARAAGIMTPHILPDGGHLSQLETAAVLKRS
GLSPLGPVAVNTMAPDEGNMFLLGKVATAAQKARFLEPLVRGEARSAFFMTEPAEEGGAGSDPSMLSTTAVRDGNDWVLN
GRKKFITGAEGARVGIVMARTGDGERAQATMFLVDLPHPAIRTERVIDTIDSSMPGGHAQVLIDGLRLPADQVLGEVNEG
FRYAQVRLSPARLSHCMRWFGTVTRADEIARAYATTRKAFGKLLIDHEGVGFMLADNLIDLQQAALMIDWCAGVLDTGSA
GTTESSMAKVAVSEALFRVADRCVQILGGNGVSRDTIVDQAFRELRAFRIYDGPTEVHKWSLAKKIKRDTLQSSHHG

Sequences:

>Translated_397_residues
MFTPCPTERSRDIADRVERFVRDVVAPYEQDPRCSAHGPTEELVLELRAKARAAGIMTPHILPDGGHLSQLETAAVLKRS
GLSPLGPVAVNTMAPDEGNMFLLGKVATAAQKARFLEPLVRGEARSAFFMTEPAEEGGAGSDPSMLSTTAVRDGNDWVLN
GRKKFITGAEGARVGIVMARTGDGERAQATMFLVDLPHPAIRTERVIDTIDSSMPGGHAQVLIDGLRLPADQVLGEVNEG
FRYAQVRLSPARLSHCMRWFGTVTRADEIARAYATTRKAFGKLLIDHEGVGFMLADNLIDLQQAALMIDWCAGVLDTGSA
GTTESSMAKVAVSEALFRVADRCVQILGGNGVSRDTIVDQAFRELRAFRIYDGPTEVHKWSLAKKIKRDTLQSSHHG
>Mature_397_residues
MFTPCPTERSRDIADRVERFVRDVVAPYEQDPRCSAHGPTEELVLELRAKARAAGIMTPHILPDGGHLSQLETAAVLKRS
GLSPLGPVAVNTMAPDEGNMFLLGKVATAAQKARFLEPLVRGEARSAFFMTEPAEEGGAGSDPSMLSTTAVRDGNDWVLN
GRKKFITGAEGARVGIVMARTGDGERAQATMFLVDLPHPAIRTERVIDTIDSSMPGGHAQVLIDGLRLPADQVLGEVNEG
FRYAQVRLSPARLSHCMRWFGTVTRADEIARAYATTRKAFGKLLIDHEGVGFMLADNLIDLQQAALMIDWCAGVLDTGSA
GTTESSMAKVAVSEALFRVADRCVQILGGNGVSRDTIVDQAFRELRAFRIYDGPTEVHKWSLAKKIKRDTLQSSHHG

Specific function: Catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=395, Percent_Identity=32.9113924050633, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI48976061, Length=395, Percent_Identity=32.9113924050633, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI38505218, Length=401, Percent_Identity=31.6708229426434, Blast_Score=181, Evalue=8e-46,
Organism=Homo sapiens, GI4557233, Length=296, Percent_Identity=31.7567567567568, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI4557231, Length=386, Percent_Identity=27.4611398963731, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI187960098, Length=386, Percent_Identity=27.4611398963731, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI4501859, Length=291, Percent_Identity=29.553264604811, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI4557235, Length=388, Percent_Identity=28.0927835051546, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI76496475, Length=388, Percent_Identity=28.0927835051546, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI4501857, Length=282, Percent_Identity=30.8510638297872, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI21361497, Length=289, Percent_Identity=30.4498269896194, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI7656849, Length=371, Percent_Identity=25.0673854447439, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI226958412, Length=388, Percent_Identity=24.4845360824742, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI226958414, Length=339, Percent_Identity=25.3687315634218, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI4503943, Length=279, Percent_Identity=26.5232974910394, Blast_Score=72, Evalue=7e-13,
Organism=Escherichia coli, GI1786223, Length=261, Percent_Identity=27.9693486590038, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87081958, Length=278, Percent_Identity=28.4172661870504, Blast_Score=88, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562446, Length=354, Percent_Identity=31.9209039548023, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17569725, Length=389, Percent_Identity=26.2210796915167, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17534899, Length=392, Percent_Identity=26.0204081632653, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17570075, Length=380, Percent_Identity=27.8947368421053, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17508101, Length=400, Percent_Identity=25.5, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17506239, Length=399, Percent_Identity=25.5639097744361, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17505929, Length=385, Percent_Identity=25.4545454545455, Blast_Score=111, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17551932, Length=322, Percent_Identity=26.7080745341615, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=287, Percent_Identity=28.9198606271777, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17533517, Length=395, Percent_Identity=24.0506329113924, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17538396, Length=281, Percent_Identity=26.3345195729537, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=277, Percent_Identity=25.2707581227437, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=182, Percent_Identity=27.4725274725275, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17534353, Length=283, Percent_Identity=24.3816254416961, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71982178, Length=290, Percent_Identity=25.5172413793103, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24666513, Length=290, Percent_Identity=30.6896551724138, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI21356377, Length=282, Percent_Identity=30.4964539007092, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24646207, Length=298, Percent_Identity=30.8724832214765, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI24660351, Length=392, Percent_Identity=26.530612244898, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281363737, Length=398, Percent_Identity=26.3819095477387, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21355753, Length=308, Percent_Identity=26.9480519480519, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI19920834, Length=288, Percent_Identity=29.5138888888889, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 43075; Mature: 43075

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTPCPTERSRDIADRVERFVRDVVAPYEQDPRCSAHGPTEELVLELRAKARAAGIMTPH
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ILPDGGHLSQLETAAVLKRSGLSPLGPVAVNTMAPDEGNMFLLGKVATAAQKARFLEPLV
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHH
RGEARSAFFMTEPAEEGGAGSDPSMLSTTAVRDGNDWVLNGRKKFITGAEGARVGIVMAR
CCCCCCEEEEECCHHCCCCCCCCCHHEEEEEECCCCEEECCCEEEEECCCCCEEEEEEEE
TGDGERAQATMFLVDLPHPAIRTERVIDTIDSSMPGGHAQVLIDGLRLPADQVLGEVNEG
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCC
FRYAQVRLSPARLSHCMRWFGTVTRADEIARAYATTRKAFGKLLIDHEGVGFMLADNLID
CEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHH
LQQAALMIDWCAGVLDTGSAGTTESSMAKVAVSEALFRVADRCVQILGGNGVSRDTIVDQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AFRELRAFRIYDGPTEVHKWSLAKKIKRDTLQSSHHG
HHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFTPCPTERSRDIADRVERFVRDVVAPYEQDPRCSAHGPTEELVLELRAKARAAGIMTPH
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ILPDGGHLSQLETAAVLKRSGLSPLGPVAVNTMAPDEGNMFLLGKVATAAQKARFLEPLV
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHH
RGEARSAFFMTEPAEEGGAGSDPSMLSTTAVRDGNDWVLNGRKKFITGAEGARVGIVMAR
CCCCCCEEEEECCHHCCCCCCCCCHHEEEEEECCCCEEECCCEEEEECCCCCEEEEEEEE
TGDGERAQATMFLVDLPHPAIRTERVIDTIDSSMPGGHAQVLIDGLRLPADQVLGEVNEG
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCC
FRYAQVRLSPARLSHCMRWFGTVTRADEIARAYATTRKAFGKLLIDHEGVGFMLADNLID
CEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHH
LQQAALMIDWCAGVLDTGSAGTTESSMAKVAVSEALFRVADRCVQILGGNGVSRDTIVDQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AFRELRAFRIYDGPTEVHKWSLAKKIKRDTLQSSHHG
HHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]