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The map label for this gene is dppC [H]

Identifier: 94313499

GI number: 94313499

Start: 1192230

End: 1193156

Strand: Direct

Name: dppC [H]

Synonym: Rmet_4577

Alternate gene names: 94313499

Gene position: 1192230-1193156 (Clockwise)

Preceding gene: 94313498

Following gene: 94313500

Centisome position: 46.21

GC content: 67.53

Gene sequence:

>927_bases
ATGGCACACCCCTCCGTCGATCCACGCGCCGTGTCCCCTTCGCTCGTGACGGCCCAGGCGCCTCCCGCCTCGCGCAGGCG
CTCCCGGTTTCCCATGATGCGCCGACTGTTCCGCGACAAACCGCTCGGCGCGGCCGGCGCCGTGATCTGCGCGATCTTCT
TGTTCTGCGGCGTCTTTGCCGGCTGGCTCGCGCCATACGGTGTCAACGAGATCAACATGATGGCGCGGCTGCAACCACCG
TCATGGGCGCATCTCTTCGGCACCGACAATCTCGGCCGTGACATCTTCTCCCGCTGCCTGTATGGCGCGCAGCTGTCGGT
GGTGATCGGCCTCTCGGCGGCCACGCTGGCCACGCTGGTTTCCCTCGTGCTTGGCATCCTGTGCGGCTATCTGGGCGGCA
AGCTGGACCTGGTGGTGCAGCGAATGGTCGACGCCTGGATGAGTTTTCCGGACCTCATCATCCTGATCGTCGTGGTCTCG
GTGCTGGGCCCGGGCAGTTGGCAAATCGTCTGCACGCTGGGTCTGCTGCTCGGTATCGGCGGCTCCAGAATCGTGCGCGG
GGCCGTGGTATCGGTGCGCGAGAACATGTACGTGCACGCGGCGCAATCGATCGGCGCCTCCACCAGCCGCATCCTGTGGC
GGCACATCCTGCCCAACGTGCTGCCGCCGGTGATCGTCCTGTTCACGACCCGCGTCGGCACCGCGATCCTGGCGGAATCG
GGACTGTCATTCCTGGGCCTCGGCGTGCCGCCGCCCGCCCCGACCTGGGGCGGCATGCTGTCGGGCGACGGGCGCACCTT
CATGTTCCAGGGGCCGTGGCTCGCGCTTGCGCCAGGCATCTGCCTGACGGTGGTGGTCTACGCCATCAACGTCTATGGCG
ATGCCATGCGCGACCTGCTCGACCCACGCCTACGCGGCGGCCGCTGA

Upstream 100 bases:

>100_bases
TCACTGGTGTCTTTCTCGTGGTCGGCGTGGCGGTGATGCTGATCAATCTGCTAGTAGACCTGAGCTACGGCCTGTTCGAC
CCCAAAGTGAGGCACCACTG

Downstream 100 bases:

>100_bases
AACGCGCCCGCCAACACCGGCCGGCAATGTGGCCCGCCGAATCACGACTCTTCAGACCCTGTAAGGAGCAAGAGATGGTG
CCCATTATCAAGGCGAATGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MAHPSVDPRAVSPSLVTAQAPPASRRRSRFPMMRRLFRDKPLGAAGAVICAIFLFCGVFAGWLAPYGVNEINMMARLQPP
SWAHLFGTDNLGRDIFSRCLYGAQLSVVIGLSAATLATLVSLVLGILCGYLGGKLDLVVQRMVDAWMSFPDLIILIVVVS
VLGPGSWQIVCTLGLLLGIGGSRIVRGAVVSVRENMYVHAAQSIGASTSRILWRHILPNVLPPVIVLFTTRVGTAILAES
GLSFLGLGVPPPAPTWGGMLSGDGRTFMFQGPWLALAPGICLTVVVYAINVYGDAMRDLLDPRLRGGR

Sequences:

>Translated_308_residues
MAHPSVDPRAVSPSLVTAQAPPASRRRSRFPMMRRLFRDKPLGAAGAVICAIFLFCGVFAGWLAPYGVNEINMMARLQPP
SWAHLFGTDNLGRDIFSRCLYGAQLSVVIGLSAATLATLVSLVLGILCGYLGGKLDLVVQRMVDAWMSFPDLIILIVVVS
VLGPGSWQIVCTLGLLLGIGGSRIVRGAVVSVRENMYVHAAQSIGASTSRILWRHILPNVLPPVIVLFTTRVGTAILAES
GLSFLGLGVPPPAPTWGGMLSGDGRTFMFQGPWLALAPGICLTVVVYAINVYGDAMRDLLDPRLRGGR
>Mature_307_residues
AHPSVDPRAVSPSLVTAQAPPASRRRSRFPMMRRLFRDKPLGAAGAVICAIFLFCGVFAGWLAPYGVNEINMMARLQPPS
WAHLFGTDNLGRDIFSRCLYGAQLSVVIGLSAATLATLVSLVLGILCGYLGGKLDLVVQRMVDAWMSFPDLIILIVVVSV
LGPGSWQIVCTLGLLLGIGGSRIVRGAVVSVRENMYVHAAQSIGASTSRILWRHILPNVLPPVIVLFTTRVGTAILAESG
LSFLGLGVPPPAPTWGGMLSGDGRTFMFQGPWLALAPGICLTVVVYAINVYGDAMRDLLDPRLRGGR

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=273, Percent_Identity=37.7289377289377, Blast_Score=200, Evalue=1e-52,
Organism=Escherichia coli, GI1787760, Length=292, Percent_Identity=35.958904109589, Blast_Score=195, Evalue=3e-51,
Organism=Escherichia coli, GI1789964, Length=258, Percent_Identity=37.984496124031, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=36.6255144032922, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1787498, Length=300, Percent_Identity=35.3333333333333, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1787549, Length=290, Percent_Identity=32.7586206896552, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1788505, Length=241, Percent_Identity=31.1203319502075, Blast_Score=127, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32903; Mature: 32771

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPSVDPRAVSPSLVTAQAPPASRRRSRFPMMRRLFRDKPLGAAGAVICAIFLFCGVFA
CCCCCCCCCCCCCCEEECCCCCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GWLAPYGVNEINMMARLQPPSWAHLFGTDNLGRDIFSRCLYGAQLSVVIGLSAATLATLV
HHHCCCCCCHHHHHEEECCCCCEEECCCCCCCHHHHHHHHHCCHHHHEECCHHHHHHHHH
SLVLGILCGYLGGKLDLVVQRMVDAWMSFPDLIILIVVVSVLGPGSWQIVCTLGLLLGIG
HHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
GSRIVRGAVVSVRENMYVHAAQSIGASTSRILWRHILPNVLPPVIVLFTTRVGTAILAES
CHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLSFLGLGVPPPAPTWGGMLSGDGRTFMFQGPWLALAPGICLTVVVYAINVYGDAMRDLL
CCCEEECCCCCCCCCCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPRLRGGR
CHHHCCCC
>Mature Secondary Structure 
AHPSVDPRAVSPSLVTAQAPPASRRRSRFPMMRRLFRDKPLGAAGAVICAIFLFCGVFA
CCCCCCCCCCCCCEEECCCCCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GWLAPYGVNEINMMARLQPPSWAHLFGTDNLGRDIFSRCLYGAQLSVVIGLSAATLATLV
HHHCCCCCCHHHHHEEECCCCCEEECCCCCCCHHHHHHHHHCCHHHHEECCHHHHHHHHH
SLVLGILCGYLGGKLDLVVQRMVDAWMSFPDLIILIVVVSVLGPGSWQIVCTLGLLLGIG
HHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
GSRIVRGAVVSVRENMYVHAAQSIGASTSRILWRHILPNVLPPVIVLFTTRVGTAILAES
CHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLSFLGLGVPPPAPTWGGMLSGDGRTFMFQGPWLALAPGICLTVVVYAINVYGDAMRDLL
CCCEEECCCCCCCCCCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPRLRGGR
CHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]