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The map label for this gene is 94313472

Identifier: 94313472

GI number: 94313472

Start: 1152684

End: 1153841

Strand: Reverse

Name: 94313472

Synonym: Rmet_4547

Alternate gene names: NA

Gene position: 1153841-1152684 (Counterclockwise)

Preceding gene: 94313474

Following gene: 94313471

Centisome position: 44.72

GC content: 63.13

Gene sequence:

>1158_bases
ATGAAGAAGACGCTGTTCGCCGCCATCGCCGGCGGCCTGCTTGCGCAAGGGGCGCAGGCACAATCGTCCGTGACGCTCTA
TGGCGTTGTGACGACGAGCATCCAGTACGTCAACCACGTGCAGAACACCAACAACGGCGTGCTGGCACCGGGCAGCGGGT
CGGACGTGTTCATGAACTCGTCGGGCATCGCGCAGTCGCGTTTCGGCCTGCGCGGTATCGAGGATCTTGGCGGCGGGCTC
CAGAGCCTGTTCGTGCTGGAGAACCAGTTCAATACCGACAACGGACAGATGGGTAACGGCGGCCTGCTGTTCGGCCGTCA
GGCTTACCTGGGTCTGCAGAACCAGTGGGGGAAGCTGACGTTTGGCCGCCAGTACACGTCAGCATTCCTGATCATGGGTA
GCTTCACGCCGGCGGCGTACGCGCCCGAGTTCGAGCCCGTGGTCGGCATTGCCGGGGCGAACTTCCGCGAAAACAACATG
GTCCAGTACCAGGGCACGTTCGGGCCGGTTTCGCTGATGACGCACTGGTCGTTCGGCGAGCGCACCGGTACGTTCGCGGC
CGGTTCGGCGTACGGTATCGGCGCGTCCTACCAGTCTGGTCCGTTCGGTGTCGCGGCGGCCTATGACGAAGTCAAGACGT
TGAATACCGCACAGGCAACGGGCGCATCGGGTTCGAACGACTACGGCCGCGACATGCGCGCGATGGTCGCGGGCAGCTAC
CGTCTCGGACTGGTGAAGATGGTCGCCGGCTATCGCTGGGGCAACTCGGTGGCGCCGTCGACCGGCACGCCGACGCTATT
GCCGCATCGCGACAACATGTATTGGGCCGGCGTGTCCTGGGACGCCACGGCCGCGCTGCGCCTGACCGCGGCGTACTACT
ACGACGACATCAAGGACGCGACGATCGCTGGGCAGCACGTCAACCCGAAGAATCCTCAGCAGTACCTGGCGCTGGCCGAC
TACAACCTTTCCAAACGCACGGATGTCTTCTTCGCGGTGATGTACGCACGCAACGCGTCGCTGAACTGGGACAACATCTC
GTATTTGCCGAACGGTCAGTCGGTGGGGTATCTGCCGTCGACCTCGCAGGTCTATTACAAGACGCCTGATGCCAGCGGTC
AGTTGGGCGTTTCACTGGGTCTGCGCCACATCTTCTGA

Upstream 100 bases:

>100_bases
ATTAAATGACGTGACGTGATCGCAAGATTGCACCTCAGGGCACCGGGTCGGAGGAACCGGAGTCATGGGCCACCACACCA
GAGGACGGGGATCCCAAAAC

Downstream 100 bases:

>100_bases
TCCAACTGAAAGCGAGGGCCTGCGCGGCACTCCACTCCGCGCAGGTATTCTGGCGCCGCAATGGATGTTGCGGCGCCGTT
TTTGTTTGTTGCGTTGCGTC

Product: outer membrane porin signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKKTLFAAIAGGLLAQGAQAQSSVTLYGVVTTSIQYVNHVQNTNNGVLAPGSGSDVFMNSSGIAQSRFGLRGIEDLGGGL
QSLFVLENQFNTDNGQMGNGGLLFGRQAYLGLQNQWGKLTFGRQYTSAFLIMGSFTPAAYAPEFEPVVGIAGANFRENNM
VQYQGTFGPVSLMTHWSFGERTGTFAAGSAYGIGASYQSGPFGVAAAYDEVKTLNTAQATGASGSNDYGRDMRAMVAGSY
RLGLVKMVAGYRWGNSVAPSTGTPTLLPHRDNMYWAGVSWDATAALRLTAAYYYDDIKDATIAGQHVNPKNPQQYLALAD
YNLSKRTDVFFAVMYARNASLNWDNISYLPNGQSVGYLPSTSQVYYKTPDASGQLGVSLGLRHIF

Sequences:

>Translated_385_residues
MKKTLFAAIAGGLLAQGAQAQSSVTLYGVVTTSIQYVNHVQNTNNGVLAPGSGSDVFMNSSGIAQSRFGLRGIEDLGGGL
QSLFVLENQFNTDNGQMGNGGLLFGRQAYLGLQNQWGKLTFGRQYTSAFLIMGSFTPAAYAPEFEPVVGIAGANFRENNM
VQYQGTFGPVSLMTHWSFGERTGTFAAGSAYGIGASYQSGPFGVAAAYDEVKTLNTAQATGASGSNDYGRDMRAMVAGSY
RLGLVKMVAGYRWGNSVAPSTGTPTLLPHRDNMYWAGVSWDATAALRLTAAYYYDDIKDATIAGQHVNPKNPQQYLALAD
YNLSKRTDVFFAVMYARNASLNWDNISYLPNGQSVGYLPSTSQVYYKTPDASGQLGVSLGLRHIF
>Mature_385_residues
MKKTLFAAIAGGLLAQGAQAQSSVTLYGVVTTSIQYVNHVQNTNNGVLAPGSGSDVFMNSSGIAQSRFGLRGIEDLGGGL
QSLFVLENQFNTDNGQMGNGGLLFGRQAYLGLQNQWGKLTFGRQYTSAFLIMGSFTPAAYAPEFEPVVGIAGANFRENNM
VQYQGTFGPVSLMTHWSFGERTGTFAAGSAYGIGASYQSGPFGVAAAYDEVKTLNTAQATGASGSNDYGRDMRAMVAGSY
RLGLVKMVAGYRWGNSVAPSTGTPTLLPHRDNMYWAGVSWDATAALRLTAAYYYDDIKDATIAGQHVNPKNPQQYLALAD
YNLSKRTDVFFAVMYARNASLNWDNISYLPNGQSVGYLPSTSQVYYKTPDASGQLGVSLGLRHIF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41231; Mature: 41231

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLFAAIAGGLLAQGAQAQSSVTLYGVVTTSIQYVNHVQNTNNGVLAPGSGSDVFMNS
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHCCCCCCEECCCCCCEEEEEC
SGIAQSRFGLRGIEDLGGGLQSLFVLENQFNTDNGQMGNGGLLFGRQAYLGLQNQWGKLT
CCCCHHHCCCCCHHHHCCCHHEEEEEECCCCCCCCCCCCCCEEECCCEEECCCCCCCCEE
FGRQYTSAFLIMGSFTPAAYAPEFEPVVGIAGANFRENNMVQYQGTFGPVSLMTHWSFGE
ECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCC
RTGTFAAGSAYGIGASYQSGPFGVAAAYDEVKTLNTAQATGASGSNDYGRDMRAMVAGSY
CCCCEECCCCEECCCCCCCCCCCEEEHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHCCH
RLGLVKMVAGYRWGNSVAPSTGTPTLLPHRDNMYWAGVSWDATAALRLTAAYYYDDIKDA
HHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEEEEEEEEHHCCCCCC
TIAGQHVNPKNPQQYLALADYNLSKRTDVFFAVMYARNASLNWDNISYLPNGQSVGYLPS
EEECCCCCCCCHHHEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCEEEECCC
TSQVYYKTPDASGQLGVSLGLRHIF
CCEEEEECCCCCCCEEHHHHHHHCC
>Mature Secondary Structure
MKKTLFAAIAGGLLAQGAQAQSSVTLYGVVTTSIQYVNHVQNTNNGVLAPGSGSDVFMNS
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHCCCCCCEECCCCCCEEEEEC
SGIAQSRFGLRGIEDLGGGLQSLFVLENQFNTDNGQMGNGGLLFGRQAYLGLQNQWGKLT
CCCCHHHCCCCCHHHHCCCHHEEEEEECCCCCCCCCCCCCCEEECCCEEECCCCCCCCEE
FGRQYTSAFLIMGSFTPAAYAPEFEPVVGIAGANFRENNMVQYQGTFGPVSLMTHWSFGE
ECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCC
RTGTFAAGSAYGIGASYQSGPFGVAAAYDEVKTLNTAQATGASGSNDYGRDMRAMVAGSY
CCCCEECCCCEECCCCCCCCCCCEEEHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHCCH
RLGLVKMVAGYRWGNSVAPSTGTPTLLPHRDNMYWAGVSWDATAALRLTAAYYYDDIKDA
HHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEEEEEEEEHHCCCCCC
TIAGQHVNPKNPQQYLALADYNLSKRTDVFFAVMYARNASLNWDNISYLPNGQSVGYLPS
EEECCCCCCCCHHHEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCEEEECCC
TSQVYYKTPDASGQLGVSLGLRHIF
CCEEEEECCCCCCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]