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The map label for this gene is glxA [H]

Identifier: 94313447

GI number: 94313447

Start: 1127083

End: 1128024

Strand: Reverse

Name: glxA [H]

Synonym: Rmet_4522

Alternate gene names: 94313447

Gene position: 1128024-1127083 (Counterclockwise)

Preceding gene: 94313449

Following gene: 94313445

Centisome position: 43.72

GC content: 66.35

Gene sequence:

>942_bases
ATGCACAACATCGGCTTCCTGCTGACGGACGGTTTTCAGGTGATGGCGCTGGCGACGCAGAGCGTCTTCGAGTACGCGAA
TCTCGTGGCCGGCGAGCCTTTCTATCGCATCAGGAATTACTCGATCGACGGTGGTCCGGTCGTGTCTTCGCTGGGGATGA
CGGTAGAGACGCACGCGGCAAGCGCGCGCGTGGCCGTCGATACCTGGGTGCTGGCCGGCGTTGGCGACCCAGTCGCGCAG
CCAACACCCGCACCGGTACTGGCGTTCGTGAGCAAGGCGGTGCCGCGCGCGCGCCGGACGGCGTCGATTTGCACGGGGGC
GTTCATTCTGGCGGAAGCCGGTCTGCTCGATGGCCGACGCGCGACCACGCACTGGGCCTTCGCGCGCGACATGAAACGGC
TCCATCCGGACATCAAGGTAGAGGACGATCGCATCTACATCGTCGATGGCGCGATCTGGACGTCGGCGGGCATGACGGCC
GGCCTGGATCTGGCGCTTGCCATGGTCGAAAAGGATCTGGGCGCGGACATCGCGCGGTCGGTCGCCCACAAGCTGGTGAT
GCACCAGCGGCGCTCGGGTGGACAGTCACAGCACTCGGAGCTACTGGATATGGCGCCGAAATCCGACCGTATCCAGAGTG
CGCTGGATTACGCGCGCAAGAACCTGAGCCAGGCACTGACGGTGGAGGAACTGGCGGAGACGGTGCATCTGAGCCCACGC
CAGTTCAGCCGCGTGTTCACCGCGGAGACCGGGCAGTCGCCGGCCAAGGCGATCGAGAATCTGAGGCTGGAAGCGGCGCG
GCTGATGATCGAACAGAGTCGCCACCCGTTGGAAGTCGTGGCGCGGGAGGCCGGCTTTCGAGACCGGCGCCATATGCGCG
AGGCGTTCCTGCGGGGGTTCGGCGTGCCGCCGCAGGCGGTGCGGCGGGAGGCCCGTGAGTAG

Upstream 100 bases:

>100_bases
GGATGCGTTGAATCCATGCATTGCATCGTAAAGCGACTTGACCATGGCAGAAATGACGATTATGGTCATGTTTTAGGACA
TGGGTGCGACGAGGCCAATC

Downstream 100 bases:

>100_bases
CAGGCGCTGGTGCCAGCGGCTCAGATGGCCGCGAGCGCCTCGATATCGAACAGTTCGATGCGCTTCCCATCCACGCGGAT
CAGGCCTTCGCGCTGGAAGC

Product: AraC family transcriptional regulator with amidase-like domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MHNIGFLLTDGFQVMALATQSVFEYANLVAGEPFYRIRNYSIDGGPVVSSLGMTVETHAASARVAVDTWVLAGVGDPVAQ
PTPAPVLAFVSKAVPRARRTASICTGAFILAEAGLLDGRRATTHWAFARDMKRLHPDIKVEDDRIYIVDGAIWTSAGMTA
GLDLALAMVEKDLGADIARSVAHKLVMHQRRSGGQSQHSELLDMAPKSDRIQSALDYARKNLSQALTVEELAETVHLSPR
QFSRVFTAETGQSPAKAIENLRLEAARLMIEQSRHPLEVVAREAGFRDRRHMREAFLRGFGVPPQAVRREARE

Sequences:

>Translated_313_residues
MHNIGFLLTDGFQVMALATQSVFEYANLVAGEPFYRIRNYSIDGGPVVSSLGMTVETHAASARVAVDTWVLAGVGDPVAQ
PTPAPVLAFVSKAVPRARRTASICTGAFILAEAGLLDGRRATTHWAFARDMKRLHPDIKVEDDRIYIVDGAIWTSAGMTA
GLDLALAMVEKDLGADIARSVAHKLVMHQRRSGGQSQHSELLDMAPKSDRIQSALDYARKNLSQALTVEELAETVHLSPR
QFSRVFTAETGQSPAKAIENLRLEAARLMIEQSRHPLEVVAREAGFRDRRHMREAFLRGFGVPPQAVRREARE
>Mature_313_residues
MHNIGFLLTDGFQVMALATQSVFEYANLVAGEPFYRIRNYSIDGGPVVSSLGMTVETHAASARVAVDTWVLAGVGDPVAQ
PTPAPVLAFVSKAVPRARRTASICTGAFILAEAGLLDGRRATTHWAFARDMKRLHPDIKVEDDRIYIVDGAIWTSAGMTA
GLDLALAMVEKDLGADIARSVAHKLVMHQRRSGGQSQHSELLDMAPKSDRIQSALDYARKNLSQALTVEELAETVHLSPR
QFSRVFTAETGQSPAKAIENLRLEAARLMIEQSRHPLEVVAREAGFRDRRHMREAFLRGFGVPPQAVRREARE

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34349; Mature: 34349

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNIGFLLTDGFQVMALATQSVFEYANLVAGEPFYRIRNYSIDGGPVVSSLGMTVETHAA
CCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCEEECCCC
SARVAVDTWVLAGVGDPVAQPTPAPVLAFVSKAVPRARRTASICTGAFILAEAGLLDGRR
CCCHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ATTHWAFARDMKRLHPDIKVEDDRIYIVDGAIWTSAGMTAGLDLALAMVEKDLGADIARS
HHHHHHHHHHHHHHCCCCEEECCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHCHHHHHH
VAHKLVMHQRRSGGQSQHSELLDMAPKSDRIQSALDYARKNLSQALTVEELAETVHLSPR
HHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QFSRVFTAETGQSPAKAIENLRLEAARLMIEQSRHPLEVVAREAGFRDRRHMREAFLRGF
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCC
GVPPQAVRREARE
CCCHHHHHHHCCC
>Mature Secondary Structure
MHNIGFLLTDGFQVMALATQSVFEYANLVAGEPFYRIRNYSIDGGPVVSSLGMTVETHAA
CCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCEEECCCC
SARVAVDTWVLAGVGDPVAQPTPAPVLAFVSKAVPRARRTASICTGAFILAEAGLLDGRR
CCCHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ATTHWAFARDMKRLHPDIKVEDDRIYIVDGAIWTSAGMTAGLDLALAMVEKDLGADIARS
HHHHHHHHHHHHHHCCCCEEECCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHCHHHHHH
VAHKLVMHQRRSGGQSQHSELLDMAPKSDRIQSALDYARKNLSQALTVEELAETVHLSPR
HHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QFSRVFTAETGQSPAKAIENLRLEAARLMIEQSRHPLEVVAREAGFRDRRHMREAFLRGF
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCC
GVPPQAVRREARE
CCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]