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The map label for this gene is oruR [H]

Identifier: 94313216

GI number: 94313216

Start: 881067

End: 882077

Strand: Reverse

Name: oruR [H]

Synonym: Rmet_4290

Alternate gene names: 94313216

Gene position: 882077-881067 (Counterclockwise)

Preceding gene: 94313217

Following gene: 94313215

Centisome position: 34.19

GC content: 61.62

Gene sequence:

>1011_bases
ATGAGGCGCAGCCAAACTTTTTCCCTGGACATAGGGTGGCAGCCCTTGCTAAAGGACTTCGGCCTACGACCGGATCAAAT
TCTCCGCAGGGCGGGGCTTCCCGAAGACATGCTTTCCCGCGGCGAGCGAGGCCTGACCACCGACGAGTGGTTCCGTTTCT
GGCGTGCCCTGGAGACCGAAGCAGCGGACACCATGTTTCCATTGCGCATCGTCGAAGTAATTGCGGCGGAGTCTTTCGAT
CCGCCGCTGTTCGCAGCCCTATGCAGCGCCAATCTGATGCAGGCGGTACAGCGCCTTGCCAAATACAAGCAACTTGTCGC
TCCCATGAGCCTGGAGGTGGACGTGGGAACGTCGAGCGAGCTAACAGTGTCGCCCCGCTGGCTGTCGATTCAGGCCGATG
TACCGTATTCCTTGCAGGTGGCCGAGATCGCGTTCTTCCTGCGATTGACCCGCCTCGGGACCCGCGAGCCCATCAAGGCA
TTGCGGGTGGTACTTCCCCAACTGCCGCCGAACGCCTACGTCCGGCGTTTCGAGAAGTTCTTCGGCGCACCTGTTACACC
GGGGGAAAGTCCAAGCGTCACATTCTCTGCCGAAGATGCCTTGCGTCCGTTTCTCACAGTGAACGAAGGCATGTGGCGGG
TGTTCGAGCCTGACCTGCGCCGCCGGCTCAGCGAACTCGACGCAACAGCGGCAACGGCGGAGCGCGTGCGCGCCGTCCTG
TTGGAACTGCTGCCGAGCAACGCCGCCACCATCGAGAAGGCTGCCGAGCGTCTGGGCATGAGCAAGCGTACGCTGCAGCG
TCGCCTTGAAGACGAGGGCGAGAACTTTCGCGCCTTGGTCAATGCCACGCGAGAACGCCTGGCCCGCCACTATCTGGGGA
ATACCAAGATGTCCAGCGGCGAGATCGCCTTCCTCCTCGGCTTCGAGGATCCCAACTCCTTTTATCGCGCATTCCAGGAA
TGGACCGGGCAAACGCCTGACAGCGCCCGTCGTGCCATGCACCTGAACTGA

Upstream 100 bases:

>100_bases
ATGCTGGCGCGCTTCGCATGTCCAACTGGGTCTTGGCGCCCTATACTGGGTCGACCTATTCAATAGCGCGAACTCCACGT
GAGTTGTCGATGAGCACCCC

Downstream 100 bases:

>100_bases
GGAGACGCACACCTTGTCCACGCCTATCGATCAACGCAAGGTGCTGCTGGCCGGCGCCACCGGACTCGTGGGAGGCCTGA
TGCTTCAGGCTCTGCTGGCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MRRSQTFSLDIGWQPLLKDFGLRPDQILRRAGLPEDMLSRGERGLTTDEWFRFWRALETEAADTMFPLRIVEVIAAESFD
PPLFAALCSANLMQAVQRLAKYKQLVAPMSLEVDVGTSSELTVSPRWLSIQADVPYSLQVAEIAFFLRLTRLGTREPIKA
LRVVLPQLPPNAYVRRFEKFFGAPVTPGESPSVTFSAEDALRPFLTVNEGMWRVFEPDLRRRLSELDATAATAERVRAVL
LELLPSNAATIEKAAERLGMSKRTLQRRLEDEGENFRALVNATRERLARHYLGNTKMSSGEIAFLLGFEDPNSFYRAFQE
WTGQTPDSARRAMHLN

Sequences:

>Translated_336_residues
MRRSQTFSLDIGWQPLLKDFGLRPDQILRRAGLPEDMLSRGERGLTTDEWFRFWRALETEAADTMFPLRIVEVIAAESFD
PPLFAALCSANLMQAVQRLAKYKQLVAPMSLEVDVGTSSELTVSPRWLSIQADVPYSLQVAEIAFFLRLTRLGTREPIKA
LRVVLPQLPPNAYVRRFEKFFGAPVTPGESPSVTFSAEDALRPFLTVNEGMWRVFEPDLRRRLSELDATAATAERVRAVL
LELLPSNAATIEKAAERLGMSKRTLQRRLEDEGENFRALVNATRERLARHYLGNTKMSSGEIAFLLGFEDPNSFYRAFQE
WTGQTPDSARRAMHLN
>Mature_336_residues
MRRSQTFSLDIGWQPLLKDFGLRPDQILRRAGLPEDMLSRGERGLTTDEWFRFWRALETEAADTMFPLRIVEVIAAESFD
PPLFAALCSANLMQAVQRLAKYKQLVAPMSLEVDVGTSSELTVSPRWLSIQADVPYSLQVAEIAFFLRLTRLGTREPIKA
LRVVLPQLPPNAYVRRFEKFFGAPVTPGESPSVTFSAEDALRPFLTVNEGMWRVFEPDLRRRLSELDATAATAERVRAVL
LELLPSNAATIEKAAERLGMSKRTLQRRLEDEGENFRALVNATRERLARHYLGNTKMSSGEIAFLLGFEDPNSFYRAFQE
WTGQTPDSARRAMHLN

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38137; Mature: 38137

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSQTFSLDIGWQPLLKDFGLRPDQILRRAGLPEDMLSRGERGLTTDEWFRFWRALETE
CCCCCEEEEECCCHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH
AADTMFPLRIVEVIAAESFDPPLFAALCSANLMQAVQRLAKYKQLVAPMSLEVDVGTSSE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
LTVSPRWLSIQADVPYSLQVAEIAFFLRLTRLGTREPIKALRVVLPQLPPNAYVRRFEKF
EEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
FGAPVTPGESPSVTFSAEDALRPFLTVNEGMWRVFEPDLRRRLSELDATAATAERVRAVL
HCCCCCCCCCCCEEECHHHHHCCCEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LELLPSNAATIEKAAERLGMSKRTLQRRLEDEGENFRALVNATRERLARHYLGNTKMSSG
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
EIAFLLGFEDPNSFYRAFQEWTGQTPDSARRAMHLN
CEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCC
>Mature Secondary Structure
MRRSQTFSLDIGWQPLLKDFGLRPDQILRRAGLPEDMLSRGERGLTTDEWFRFWRALETE
CCCCCEEEEECCCHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH
AADTMFPLRIVEVIAAESFDPPLFAALCSANLMQAVQRLAKYKQLVAPMSLEVDVGTSSE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
LTVSPRWLSIQADVPYSLQVAEIAFFLRLTRLGTREPIKALRVVLPQLPPNAYVRRFEKF
EEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
FGAPVTPGESPSVTFSAEDALRPFLTVNEGMWRVFEPDLRRRLSELDATAATAERVRAVL
HCCCCCCCCCCCEEECHHHHHCCCEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LELLPSNAATIEKAAERLGMSKRTLQRRLEDEGENFRALVNATRERLARHYLGNTKMSSG
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
EIAFLLGFEDPNSFYRAFQEWTGQTPDSARRAMHLN
CEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]