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The map label for this gene is rlpA [C]

Identifier: 94313213

GI number: 94313213

Start: 878513

End: 878797

Strand: Reverse

Name: rlpA [C]

Synonym: Rmet_4287

Alternate gene names: 94313213

Gene position: 878797-878513 (Counterclockwise)

Preceding gene: 94313214

Following gene: 94313211

Centisome position: 34.06

GC content: 58.6

Gene sequence:

>285_bases
ATGCTGCAATCCGGCGAGGCGTCATGGTACTCGGCAACGTTCCAGGGGCATCTGACCGCAAACGGAGAACGCTACGATAG
CAGCGCCCTGACTGCCGCCCATCGAACATTACCGCTCGGCAGCCATGTGCGCGTCAGATCGTTGGCTACCGGAAAATCGG
TTGTCGTTCGCATCAACGATCGCGGACCATACGTCAACGGCCGAATTATCGATCTCTCTTATGCTGCGGCGGAAGCGTTG
GGATTGCCAGATGCGCGGTCGATGCGGGTGGAGATTGAGCGTTGA

Upstream 100 bases:

>100_bases
AGTCTTGGGAATCTGCGGCTTGTTCACTGCATGCGGAGAGATTCCGTCCAGGCATGCCACGTGCGGCGCTGATTCCTGTC
GCCCTCGGCACGAGCACGAG

Downstream 100 bases:

>100_bases
TTTGCTTTGAGTGCGGATTCAACCAGCGAAGGCAACGCACTAAACGCGCGGCCCTCACATGATTGAGGCAATGCGGTGGT
CGGGCGCGCACGAGACCACC

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MLQSGEASWYSATFQGHLTANGERYDSSALTAAHRTLPLGSHVRVRSLATGKSVVVRINDRGPYVNGRIIDLSYAAAEAL
GLPDARSMRVEIER

Sequences:

>Translated_94_residues
MLQSGEASWYSATFQGHLTANGERYDSSALTAAHRTLPLGSHVRVRSLATGKSVVVRINDRGPYVNGRIIDLSYAAAEAL
GLPDARSMRVEIER
>Mature_94_residues
MLQSGEASWYSATFQGHLTANGERYDSSALTAAHRTLPLGSHVRVRSLATGKSVVVRINDRGPYVNGRIIDLSYAAAEAL
GLPDARSMRVEIER

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=89, Percent_Identity=49.438202247191, Blast_Score=89, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 10215; Mature: 10215

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSGEASWYSATFQGHLTANGERYDSSALTAAHRTLPLGSHVRVRSLATGKSVVVRIND
CCCCCCCCEEEEEEEEEEEECCCEECCCCEEEHHHCCCCCCCEEEEEECCCCEEEEEECC
RGPYVNGRIIDLSYAAAEALGLPDARSMRVEIER
CCCEECCEEEEEECCHHHHCCCCCCCCEEEEEEC
>Mature Secondary Structure
MLQSGEASWYSATFQGHLTANGERYDSSALTAAHRTLPLGSHVRVRSLATGKSVVVRIND
CCCCCCCCEEEEEEEEEEEECCCEECCCCEEEHHHCCCCCCCEEEEEECCCCEEEEEECC
RGPYVNGRIIDLSYAAAEALGLPDARSMRVEIER
CCCEECCEEEEEECCHHHHCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]