| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is citB [H]
Identifier: 94313138
GI number: 94313138
Start: 795053
End: 796225
Strand: Direct
Name: citB [H]
Synonym: Rmet_4211
Alternate gene names: 94313138
Gene position: 795053-796225 (Clockwise)
Preceding gene: 94313137
Following gene: 94313139
Centisome position: 30.82
GC content: 66.41
Gene sequence:
>1173_bases ATGCAACATCTTGAAGCGCTGACGCGCGAGGCCGCGGCATTGGCGCGTGGCGCGCTGCCGCTGACTGCGGACGAGGGCGA AGTGGCCCGCACCCTGCAGATCTGCAACGCCTGCCGCTATTGCGAGGGCTTCTGCGCGGTGTTCCCGGCAATGACGCGCC GGCTGGAGTTTCCCAAGGCCGATATCCACTACCTGGCTAATCTGTGCCACAACTGTGGCGCCTGCTATCACGCCTGCCAG TACGCGCCGCCGCACGAGTTCGCGGTCAATATTCCGCAGGCGATGGCCAAGGTGCGCGTGCAGACCTACGGCGACTACGC TTTCCCCGCCGCGCTCGGCGGTTTGTACCGGCGCGCGGGGCTGACCACGGCGCTGGCGCTGGCTGGCGGCCTGGCGTTGT TCCTGCTGATGGTATTGGCGATGCGCGGCAGCCTGCTGCACGCGCCGCTGGCTGGCAACTTCTACGCGATCTTCCCGCAC AACCTGCTGGCAGTGATGTTCGGCGTGGTGTTCGTCTTCGCCATCGTTGCACTGGGGATCGGGGTGACGCGGTTCTGGCG GCAGGTAACGCCCGGCACGCGAGCCAGTGATGACGGCGGTGCGGCCGCGGGCGGCGCCGCGCACGATGCGCTGCGGCTCA AGTATCTCGGCGGTGGGCACGGCGAAGGCTGCAACAACGAGGACGACGCGTTCACGCTGCTGCGCCGGCGCTTCCACCAT TTCACGTTCTACGGCTTCATGCTGTGCTTTGCCGCGACGACGGTGGCCACGCTGTATCACTACCTGCTGGATCTGCACGC ACCTTACGCGCTGACGAGCCTGCCTGTGCTGCTTGGCACGGTCGGCGGCATCGGCCTGCTGATCGGCACCGCCGGTCTGT TCTGGCTCAATGTGCGGCGCGACCCGCGCACTGGCGATCCGGATCAGAAGCCGATGGACCGTGGATTCATCGCGCTGCTG TTCCTGACCAGCGCGAGCGGACTGGTGTTGCTGGCCTTGCGTGATACCGGCGCGATGGCCACCTCGCTGGCAGTTCACCT CGGCATCGTCATGGCGCTGTTCCTGACGCTGCCGTACGGCAAGTTCGCGCATGGCATCTACCGCTGCGCGGCGCTACTGA AGTACAACATCGAAAAGCGCCGGCCGAGCGATCTCGCGCTGGGCGCCGACTAA
Upstream 100 bases:
>100_bases GCGATCGGCACCGCGTTCGGCCGGATTGCCGGCACGCAGGCCGCCAAGGCGGCAAAGGGCATGGCCAGGCGTGCCTCACA GGCATCAACGGAAAAGGAAT
Downstream 100 bases:
>100_bases GACATCGAATCGAATCAAGAAACCGAAAAGGGAGACAGGATCATGACGAAACCGGGTGTGCTTAACATTCCCTCGATGCG CGGCCAGTGTAGCGACACGG
Product: tricarballylate utilization protein B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MQHLEALTREAAALARGALPLTADEGEVARTLQICNACRYCEGFCAVFPAMTRRLEFPKADIHYLANLCHNCGACYHACQ YAPPHEFAVNIPQAMAKVRVQTYGDYAFPAALGGLYRRAGLTTALALAGGLALFLLMVLAMRGSLLHAPLAGNFYAIFPH NLLAVMFGVVFVFAIVALGIGVTRFWRQVTPGTRASDDGGAAAGGAAHDALRLKYLGGGHGEGCNNEDDAFTLLRRRFHH FTFYGFMLCFAATTVATLYHYLLDLHAPYALTSLPVLLGTVGGIGLLIGTAGLFWLNVRRDPRTGDPDQKPMDRGFIALL FLTSASGLVLLALRDTGAMATSLAVHLGIVMALFLTLPYGKFAHGIYRCAALLKYNIEKRRPSDLALGAD
Sequences:
>Translated_390_residues MQHLEALTREAAALARGALPLTADEGEVARTLQICNACRYCEGFCAVFPAMTRRLEFPKADIHYLANLCHNCGACYHACQ YAPPHEFAVNIPQAMAKVRVQTYGDYAFPAALGGLYRRAGLTTALALAGGLALFLLMVLAMRGSLLHAPLAGNFYAIFPH NLLAVMFGVVFVFAIVALGIGVTRFWRQVTPGTRASDDGGAAAGGAAHDALRLKYLGGGHGEGCNNEDDAFTLLRRRFHH FTFYGFMLCFAATTVATLYHYLLDLHAPYALTSLPVLLGTVGGIGLLIGTAGLFWLNVRRDPRTGDPDQKPMDRGFIALL FLTSASGLVLLALRDTGAMATSLAVHLGIVMALFLTLPYGKFAHGIYRCAALLKYNIEKRRPSDLALGAD >Mature_390_residues MQHLEALTREAAALARGALPLTADEGEVARTLQICNACRYCEGFCAVFPAMTRRLEFPKADIHYLANLCHNCGACYHACQ YAPPHEFAVNIPQAMAKVRVQTYGDYAFPAALGGLYRRAGLTTALALAGGLALFLLMVLAMRGSLLHAPLAGNFYAIFPH NLLAVMFGVVFVFAIVALGIGVTRFWRQVTPGTRASDDGGAAAGGAAHDALRLKYLGGGHGEGCNNEDDAFTLLRRRFHH FTFYGFMLCFAATTVATLYHYLLDLHAPYALTSLPVLLGTVGGIGLLIGTAGLFWLNVRRDPRTGDPDQKPMDRGFIALL FLTSASGLVLLALRDTGAMATSLAVHLGIVMALFLTLPYGKFAHGIYRCAALLKYNIEKRRPSDLALGAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012830 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42013; Mature: 42013
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLEALTREAAALARGALPLTADEGEVARTLQICNACRYCEGFCAVFPAMTRRLEFPKA CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH DIHYLANLCHNCGACYHACQYAPPHEFAVNIPQAMAKVRVQTYGDYAFPAALGGLYRRAG HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LTTALALAGGLALFLLMVLAMRGSLLHAPLAGNFYAIFPHNLLAVMFGVVFVFAIVALGI HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH GVTRFWRQVTPGTRASDDGGAAAGGAAHDALRLKYLGGGHGEGCNNEDDAFTLLRRRFHH HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHH FTFYGFMLCFAATTVATLYHYLLDLHAPYALTSLPVLLGTVGGIGLLIGTAGLFWLNVRR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC DPRTGDPDQKPMDRGFIALLFLTSASGLVLLALRDTGAMATSLAVHLGIVMALFLTLPYG CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCH KFAHGIYRCAALLKYNIEKRRPSDLALGAD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQHLEALTREAAALARGALPLTADEGEVARTLQICNACRYCEGFCAVFPAMTRRLEFPKA CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH DIHYLANLCHNCGACYHACQYAPPHEFAVNIPQAMAKVRVQTYGDYAFPAALGGLYRRAG HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LTTALALAGGLALFLLMVLAMRGSLLHAPLAGNFYAIFPHNLLAVMFGVVFVFAIVALGI HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH GVTRFWRQVTPGTRASDDGGAAAGGAAHDALRLKYLGGGHGEGCNNEDDAFTLLRRRFHH HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHH FTFYGFMLCFAATTVATLYHYLLDLHAPYALTSLPVLLGTVGGIGLLIGTAGLFWLNVRR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC DPRTGDPDQKPMDRGFIALLFLTSASGLVLLALRDTGAMATSLAVHLGIVMALFLTLPYG CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCH KFAHGIYRCAALLKYNIEKRRPSDLALGAD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677609; 1718953 [H]