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The map label for this gene is yqjI [H]

Identifier: 94313125

GI number: 94313125

Start: 783163

End: 783906

Strand: Direct

Name: yqjI [H]

Synonym: Rmet_4198

Alternate gene names: 94313125

Gene position: 783163-783906 (Clockwise)

Preceding gene: 94313122

Following gene: 94313126

Centisome position: 30.35

GC content: 65.32

Gene sequence:

>744_bases
ATGAGGGACTGCTTTGGTTCTGATGGTAGGGGTGAAGGTCGCCAAGGTCATCAAGGGCGGCACGGTGGACACAGTGGGCA
TGGGCATGGGCATGGGCATGGGCATTGGCGCGGGCAGCGTCACGATGGCTTGCGCGTGCTGATCCACGCGATGGGCCGAG
GTGGCAGCTTCTGGTCCCGTGGCGGCGGTGGAGATTGGGACGGCTCCGATGGCTTCGATGGCGAAAGCCTGCGCCGTGGC
CGCAAGTTCAGCGCCGAGGATCTGCAACTGTTGTTGCTGTCGCTGCTAGAGGAAAAGCCGTCGCATGGCTATGAGCTGAT
CAAGGCGCTGGAGGCACGCACGGGCGGGTTCTACAAGCCGAGCCCGGGCGTGGTCTACCCCGCGCTGACTTTCCTGGAGG
ACCTCGGCTACGCAACGGTCGATACCGAGGGCAACAAGAAGCGCTACCAGTTGGCAGACGCCGGCCGCGCCTATCTGGAA
GAGAACCGTGAGCGGCTGGAGCAGATGCTGGCACGGCTACAGCACGTGGCACGCAAGATGGACTGGATGCGCCGGGCCAT
GCGCGGCGAGCCGCAGCGCGAGCCCGAGCAGGGCGGATGGGTGCCCGAGTTCGTGACGTCGCGGATGCGACTCAAGCAGG
CGCTGGCGCTTCGCAGCGGTGCGTCTCCAGACGAACAGCGCCGGATTGCCGCCATCCTGAACCGCGCGGCGGATGACATC
GAATCGGGAGACCAGAACGCATGA

Upstream 100 bases:

>100_bases
CAGGAACGTTCCCGTATCGTGCGCCCGAGAATTCGTCCTTGACTTTATATCGTACGATATATATCGTAAGATGCATCGTA
AGACTTGGTGGAGTGCAATC

Downstream 100 bases:

>100_bases
ATGACGACCGCAATCTGACAGTCGAGCGCGTCCGCCATCCGCTCAAGATGCGCCTGCTCAAGGTGTTGCGCACGCACCGG
GTATCGCCGCAGTTGCTGCG

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRDCFGSDGRGEGRQGHQGRHGGHSGHGHGHGHGHWRGQRHDGLRVLIHAMGRGGSFWSRGGGGDWDGSDGFDGESLRRG
RKFSAEDLQLLLLSLLEEKPSHGYELIKALEARTGGFYKPSPGVVYPALTFLEDLGYATVDTEGNKKRYQLADAGRAYLE
ENRERLEQMLARLQHVARKMDWMRRAMRGEPQREPEQGGWVPEFVTSRMRLKQALALRSGASPDEQRRIAAILNRAADDI
ESGDQNA

Sequences:

>Translated_247_residues
MRDCFGSDGRGEGRQGHQGRHGGHSGHGHGHGHGHWRGQRHDGLRVLIHAMGRGGSFWSRGGGGDWDGSDGFDGESLRRG
RKFSAEDLQLLLLSLLEEKPSHGYELIKALEARTGGFYKPSPGVVYPALTFLEDLGYATVDTEGNKKRYQLADAGRAYLE
ENRERLEQMLARLQHVARKMDWMRRAMRGEPQREPEQGGWVPEFVTSRMRLKQALALRSGASPDEQRRIAAILNRAADDI
ESGDQNA
>Mature_247_residues
MRDCFGSDGRGEGRQGHQGRHGGHSGHGHGHGHGHWRGQRHDGLRVLIHAMGRGGSFWSRGGGGDWDGSDGFDGESLRRG
RKFSAEDLQLLLLSLLEEKPSHGYELIKALEARTGGFYKPSPGVVYPALTFLEDLGYATVDTEGNKKRYQLADAGRAYLE
ENRERLEQMLARLQHVARKMDWMRRAMRGEPQREPEQGGWVPEFVTSRMRLKQALALRSGASPDEQRRIAAILNRAADDI
ESGDQNA

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=162, Percent_Identity=37.6543209876543, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 27536; Mature: 27536

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDCFGSDGRGEGRQGHQGRHGGHSGHGHGHGHGHWRGQRHDGLRVLIHAMGRGGSFWSR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
GGGGDWDGSDGFDGESLRRGRKFSAEDLQLLLLSLLEEKPSHGYELIKALEARTGGFYKP
CCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
SPGVVYPALTFLEDLGYATVDTEGNKKRYQLADAGRAYLEENRERLEQMLARLQHVARKM
CCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWMRRAMRGEPQREPEQGGWVPEFVTSRMRLKQALALRSGASPDEQRRIAAILNRAADDI
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ESGDQNA
CCCCCCC
>Mature Secondary Structure
MRDCFGSDGRGEGRQGHQGRHGGHSGHGHGHGHGHWRGQRHDGLRVLIHAMGRGGSFWSR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
GGGGDWDGSDGFDGESLRRGRKFSAEDLQLLLLSLLEEKPSHGYELIKALEARTGGFYKP
CCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
SPGVVYPALTFLEDLGYATVDTEGNKKRYQLADAGRAYLEENRERLEQMLARLQHVARKM
CCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWMRRAMRGEPQREPEQGGWVPEFVTSRMRLKQALALRSGASPDEQRRIAAILNRAADDI
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ESGDQNA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]