| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is bugT
Identifier: 94313073
GI number: 94313073
Start: 720711
End: 721730
Strand: Reverse
Name: bugT
Synonym: Rmet_4146
Alternate gene names: NA
Gene position: 721730-720711 (Counterclockwise)
Preceding gene: 94313074
Following gene: 94313072
Centisome position: 27.97
GC content: 69.12
Gene sequence:
>1020_bases ATGAACAAGATCCACCCGACCCGTCCGACCCGCTCGGCCTCCTCGCGACGCCGCACCCTCGTGCACGGCCTGATCGCCGT GGCGGCCATCGCCGCCCTGCCGGGTGCGTCCGCATTTGCCGCCGACGCCTATCCGGCTCAGCCGATCCGTCTGGTCGTAC CGTTCCCGCCGGCAGGCGGCACCGACGTGCTGTCGCGTCTGGTCTTCAACAAGATTGGCACCGCCACGCACTGGACGGTG GTGGTGGAGAACCGCGCCGGCGCCGGCGGCAACATCGGCCTCGACGCCGTGGCCAAGGCACGCCCGGATGGCTACACGAT CGGCATGGGCCAGACCGCCAACCTCGCCATCAACCCGACGCTCTACCCGAAGATGCCGTACAACGCGGTCACGGATTTCA CGCCCGTGGCCCTGGTGGCCGCGCAGCCCGTGGTGCTGATCGTGCGACAGGACTCGCCCTACAAGACGCTGGCTGACCTC GTGGCCGCGGCCAAGACCAAGCAACTGTCGATGGCGTCAGCGGGCACCGGCACCGTGGGCCACCTGACCGGCGAGATGTT CCAGCGCCGTGCCGGCTTCAAGGCGCTGCATGTGCCATACAAGGGCGCATCGCCCGCGCTGACCGACCTGATGGGCGGCC AGACCGACTTCTACTTCGCCACGCCGCCGATCGCCATGCCGATGCTCAAGGCTGGCAAGCTGCGCGCGCTGGGCGTGACG TCGGTCAAGCGCGTGGCGCTGCTGCCGAATGTGCCCACCGTCGCGGAGCAGGGCTACGCGGGTTTCCAGGCCGAGGACTG GAAGGCACTGGTGGCGCCCGCCGGCACACCGGCCGACGTGATCGCCCGCCTGAACGCGGAAGTCAACAAGGCGCTCAAGG ATGCGGATACGATCGCCAGGCTGCGTGACGAAGGCAGCGAACCGCGCGGCGGCTCCGCGGCCGACCTCGCCACGTTCATC AAGAGCGAGCACACGCGCTGGGGCACGATCGTGCGAGACTCCGGCGCTCGCGTTGAATAA
Upstream 100 bases:
>100_bases ATGACTTGACAGTCCGTCGCCCCCCTCCTATTCTCCGTTTCATTCCTTTCTTAAGATCGATGTTCTGTTCTATAGAACCA CAGAAATCGGAGACCCCAGC
Downstream 100 bases:
>100_bases GACCAACAACATGCCTGGCCGGACCCACATACCCCTCATGCAAAAGCCGCTTCGCAATATCCGCGTGCTCGACCTCACCA ACGTGCTGGCCGGGCCCTTC
Product: extra-cytoplasmic solute receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MNKIHPTRPTRSASSRRRTLVHGLIAVAAIAALPGASAFAADAYPAQPIRLVVPFPPAGGTDVLSRLVFNKIGTATHWTV VVENRAGAGGNIGLDAVAKARPDGYTIGMGQTANLAINPTLYPKMPYNAVTDFTPVALVAAQPVVLIVRQDSPYKTLADL VAAAKTKQLSMASAGTGTVGHLTGEMFQRRAGFKALHVPYKGASPALTDLMGGQTDFYFATPPIAMPMLKAGKLRALGVT SVKRVALLPNVPTVAEQGYAGFQAEDWKALVAPAGTPADVIARLNAEVNKALKDADTIARLRDEGSEPRGGSAADLATFI KSEHTRWGTIVRDSGARVE
Sequences:
>Translated_339_residues MNKIHPTRPTRSASSRRRTLVHGLIAVAAIAALPGASAFAADAYPAQPIRLVVPFPPAGGTDVLSRLVFNKIGTATHWTV VVENRAGAGGNIGLDAVAKARPDGYTIGMGQTANLAINPTLYPKMPYNAVTDFTPVALVAAQPVVLIVRQDSPYKTLADL VAAAKTKQLSMASAGTGTVGHLTGEMFQRRAGFKALHVPYKGASPALTDLMGGQTDFYFATPPIAMPMLKAGKLRALGVT SVKRVALLPNVPTVAEQGYAGFQAEDWKALVAPAGTPADVIARLNAEVNKALKDADTIARLRDEGSEPRGGSAADLATFI KSEHTRWGTIVRDSGARVE >Mature_339_residues MNKIHPTRPTRSASSRRRTLVHGLIAVAAIAALPGASAFAADAYPAQPIRLVVPFPPAGGTDVLSRLVFNKIGTATHWTV VVENRAGAGGNIGLDAVAKARPDGYTIGMGQTANLAINPTLYPKMPYNAVTDFTPVALVAAQPVVLIVRQDSPYKTLADL VAAAKTKQLSMASAGTGTVGHLTGEMFQRRAGFKALHVPYKGASPALTDLMGGQTDFYFATPPIAMPMLKAGKLRALGVT SVKRVALLPNVPTVAEQGYAGFQAEDWKALVAPAGTPADVIARLNAEVNKALKDADTIARLRDEGSEPRGGSAADLATFI KSEHTRWGTIVRDSGARVE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35551; Mature: 35551
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIHPTRPTRSASSRRRTLVHGLIAVAAIAALPGASAFAADAYPAQPIRLVVPFPPAGG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCC TDVLSRLVFNKIGTATHWTVVVENRAGAGGNIGLDAVAKARPDGYTIGMGQTANLAINPT HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCCCCEEECCE LYPKMPYNAVTDFTPVALVAAQPVVLIVRQDSPYKTLADLVAAAKTKQLSMASAGTGTVG ECCCCCCCHHCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCHH HLTGEMFQRRAGFKALHVPYKGASPALTDLMGGQTDFYFATPPIAMPMLKAGKLRALGVT HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHCCCCEEEECHH SVKRVALLPNVPTVAEQGYAGFQAEDWKALVAPAGTPADVIARLNAEVNKALKDADTIAR HHHHEEECCCCCHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH LRDEGSEPRGGSAADLATFIKSEHTRWGTIVRDSGARVE HHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCC >Mature Secondary Structure MNKIHPTRPTRSASSRRRTLVHGLIAVAAIAALPGASAFAADAYPAQPIRLVVPFPPAGG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCC TDVLSRLVFNKIGTATHWTVVVENRAGAGGNIGLDAVAKARPDGYTIGMGQTANLAINPT HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCCCCEEECCE LYPKMPYNAVTDFTPVALVAAQPVVLIVRQDSPYKTLADLVAAAKTKQLSMASAGTGTVG ECCCCCCCHHCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCHH HLTGEMFQRRAGFKALHVPYKGASPALTDLMGGQTDFYFATPPIAMPMLKAGKLRALGVT HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHCCCCEEEECHH SVKRVALLPNVPTVAEQGYAGFQAEDWKALVAPAGTPADVIARLNAEVNKALKDADTIAR HHHHEEECCCCCHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH LRDEGSEPRGGSAADLATFIKSEHTRWGTIVRDSGARVE HHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]