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The map label for this gene is caiB1 [H]

Identifier: 94313072

GI number: 94313072

Start: 719474

End: 720718

Strand: Reverse

Name: caiB1 [H]

Synonym: Rmet_4145

Alternate gene names: 94313072

Gene position: 720718-719474 (Counterclockwise)

Preceding gene: 94313073

Following gene: 94313071

Centisome position: 27.93

GC content: 66.27

Gene sequence:

>1245_bases
TTGAATAAGACCAACAACATGCCTGGCCGGACCCACATACCCCTCATGCAAAAGCCGCTTCGCAATATCCGCGTGCTCGA
CCTCACCAACGTGCTGGCCGGGCCCTTCTGCTGCCACCAGCTCGCCCACATGGGGGCTGAGGTGATCAAGGTGGAAACGC
CCGGCACGGGCGACCTCGCACGTCAGCTTGGCGCCGATGCCGAGCTGAACCGCAAGCTGATGGGCGTCTCGTTCCTGGCG
CAGAACCCCGGCAAGCGCTCGATCACGATCAACCTCAAGCACGCGCGCGGCAAGGAAGTCTTCCGCAAGCTGGTGCAGAG
CGCCGACGTCGTTGTCGAGAACTTCCGCCCCGGCGTGATGACGCGCCTGGGCCTGGGCTACGACGAACTCAAGCTGGTGA
ACCCGCGCCTGATCTACTGCGCGATCTCCGGATTCGGCCAGGATGGGCCGCTCTCCGACCTGCCGGCCTATGACCAGATC
ATCCAGGGCATGGCAGGCGTGATGAGCATCACCGGCGACCCGCAGACCGCGCCGTATCGCGTCGGTTATCCCGTCTCCGA
CACCATCGGCGGCATGACCGCGGCCTTTTCCATCGCCGCCTCGCTGGCCGATACCGAACGCACGGAAGGCTACTTCCTCG
ACGTATCGATGCTGGAAGCCACGCTGGTCACGATGGGCTGGGTGGTTTCCAACCATCTGGTGGCGGGCAAGGACCCTGCC
CCGATGGGCAACGAGAACATGACAGCGAGCCCGTCTGGCACGTTCCGCACTGGCGACGGCCCGCTCAATATCGCGGCCAA
CAAGCAGGAGCAGTTCGAAGCGGTGTGCCGCGTGGTGGGCCGCCCCGAGCTCGCGACCGACCCGCGCTTTGCCGAGCGCC
AGTCGCGCCTGGCGAACCGCGCGGCGCTGACCGCCGAACTGGAAGCGGAACTGGCGAAGAAGTCCGCCACCGACTGGTGG
CAACTGCTCAATGAGGCTGGCGTGCCGGCCGGGCCGGTGCTGAAGGTGCCGGACACGCTCGCACTTCCGCAGGTGCGCGA
CCGCGGCATGATCGGCGCGTTCGAAAACGTGCCTGGCGTGGGTCGCGACATCCGCCTGCTGCGCACCGGTTTCAAGGTCA
ACGGGCAGGCACCGTCCGTGGACACGCCCCCGCCGCAACTCGGCGAGCATACCGACGACATCCTCGGCGAACTCGGCTAT
GACGCCGCCGCCATCGACACCCTCAAACAGGAGCGCGCGCTATGA

Upstream 100 bases:

>100_bases
GGCAGCGAACCGCGCGGCGGCTCCGCGGCCGACCTCGCCACGTTCATCAAGAGCGAGCACACGCGCTGGGGCACGATCGT
GCGAGACTCCGGCGCTCGCG

Downstream 100 bases:

>100_bases
GCGCCACGAACGAAACGATCGACGCCGGCCAACAGGCTTCGCAGGACTGGTGGCGTACCGAAATCATCGACATGAAGCCG
GGCGAGATCCGCTATCGCGG

Product: acyl-CoA transferase/L-carnitine dehydratase, CaiB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MNKTNNMPGRTHIPLMQKPLRNIRVLDLTNVLAGPFCCHQLAHMGAEVIKVETPGTGDLARQLGADAELNRKLMGVSFLA
QNPGKRSITINLKHARGKEVFRKLVQSADVVVENFRPGVMTRLGLGYDELKLVNPRLIYCAISGFGQDGPLSDLPAYDQI
IQGMAGVMSITGDPQTAPYRVGYPVSDTIGGMTAAFSIAASLADTERTEGYFLDVSMLEATLVTMGWVVSNHLVAGKDPA
PMGNENMTASPSGTFRTGDGPLNIAANKQEQFEAVCRVVGRPELATDPRFAERQSRLANRAALTAELEAELAKKSATDWW
QLLNEAGVPAGPVLKVPDTLALPQVRDRGMIGAFENVPGVGRDIRLLRTGFKVNGQAPSVDTPPPQLGEHTDDILGELGY
DAAAIDTLKQERAL

Sequences:

>Translated_414_residues
MNKTNNMPGRTHIPLMQKPLRNIRVLDLTNVLAGPFCCHQLAHMGAEVIKVETPGTGDLARQLGADAELNRKLMGVSFLA
QNPGKRSITINLKHARGKEVFRKLVQSADVVVENFRPGVMTRLGLGYDELKLVNPRLIYCAISGFGQDGPLSDLPAYDQI
IQGMAGVMSITGDPQTAPYRVGYPVSDTIGGMTAAFSIAASLADTERTEGYFLDVSMLEATLVTMGWVVSNHLVAGKDPA
PMGNENMTASPSGTFRTGDGPLNIAANKQEQFEAVCRVVGRPELATDPRFAERQSRLANRAALTAELEAELAKKSATDWW
QLLNEAGVPAGPVLKVPDTLALPQVRDRGMIGAFENVPGVGRDIRLLRTGFKVNGQAPSVDTPPPQLGEHTDDILGELGY
DAAAIDTLKQERAL
>Mature_414_residues
MNKTNNMPGRTHIPLMQKPLRNIRVLDLTNVLAGPFCCHQLAHMGAEVIKVETPGTGDLARQLGADAELNRKLMGVSFLA
QNPGKRSITINLKHARGKEVFRKLVQSADVVVENFRPGVMTRLGLGYDELKLVNPRLIYCAISGFGQDGPLSDLPAYDQI
IQGMAGVMSITGDPQTAPYRVGYPVSDTIGGMTAAFSIAASLADTERTEGYFLDVSMLEATLVTMGWVVSNHLVAGKDPA
PMGNENMTASPSGTFRTGDGPLNIAANKQEQFEAVCRVVGRPELATDPRFAERQSRLANRAALTAELEAELAKKSATDWW
QLLNEAGVPAGPVLKVPDTLALPQVRDRGMIGAFENVPGVGRDIRLLRTGFKVNGQAPSVDTPPPQLGEHTDDILGELGY
DAAAIDTLKQERAL

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=393, Percent_Identity=34.6055979643766, Blast_Score=245, Evalue=5e-65,
Organism=Homo sapiens, GI300863124, Length=420, Percent_Identity=32.6190476190476, Blast_Score=234, Evalue=8e-62,
Organism=Homo sapiens, GI300863126, Length=395, Percent_Identity=31.6455696202532, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI13376042, Length=420, Percent_Identity=29.5238095238095, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI266456254, Length=401, Percent_Identity=29.426433915212, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI42794625, Length=401, Percent_Identity=29.426433915212, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI266458393, Length=258, Percent_Identity=34.1085271317829, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI266458397, Length=258, Percent_Identity=34.1085271317829, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI42822893, Length=139, Percent_Identity=39.568345323741, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI266458395, Length=139, Percent_Identity=39.568345323741, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI87082093, Length=334, Percent_Identity=38.9221556886228, Blast_Score=250, Evalue=1e-67,
Organism=Escherichia coli, GI1788717, Length=428, Percent_Identity=31.0747663551402, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1786222, Length=421, Percent_Identity=26.1282660332542, Blast_Score=96, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI32564160, Length=347, Percent_Identity=23.9193083573487, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115535051, Length=344, Percent_Identity=25, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24648431, Length=402, Percent_Identity=36.318407960199, Blast_Score=249, Evalue=3e-66,
Organism=Drosophila melanogaster, GI24585488, Length=327, Percent_Identity=29.9694189602446, Blast_Score=124, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 44561; Mature: 44561

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTNNMPGRTHIPLMQKPLRNIRVLDLTNVLAGPFCCHQLAHMGAEVIKVETPGTGDLA
CCCCCCCCCCCCCCHHHHHHHCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH
RQLGADAELNRKLMGVSFLAQNPGKRSITINLKHARGKEVFRKLVQSADVVVENFRPGVM
HHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHH
TRLGLGYDELKLVNPRLIYCAISGFGQDGPLSDLPAYDQIIQGMAGVMSITGDPQTAPYR
HHHCCCHHHEEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCEE
VGYPVSDTIGGMTAAFSIAASLADTERTEGYFLDVSMLEATLVTMGWVVSNHLVAGKDPA
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCEECCCCCC
PMGNENMTASPSGTFRTGDGPLNIAANKQEQFEAVCRVVGRPELATDPRFAERQSRLANR
CCCCCCCCCCCCCCEECCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AALTAELEAELAKKSATDWWQLLNEAGVPAGPVLKVPDTLALPQVRDRGMIGAFENVPGV
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCCCCCCHHCCCCEECHHCCCCC
GRDIRLLRTGFKVNGQAPSVDTPPPQLGEHTDDILGELGYDAAAIDTLKQERAL
CCHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNKTNNMPGRTHIPLMQKPLRNIRVLDLTNVLAGPFCCHQLAHMGAEVIKVETPGTGDLA
CCCCCCCCCCCCCCHHHHHHHCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH
RQLGADAELNRKLMGVSFLAQNPGKRSITINLKHARGKEVFRKLVQSADVVVENFRPGVM
HHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHH
TRLGLGYDELKLVNPRLIYCAISGFGQDGPLSDLPAYDQIIQGMAGVMSITGDPQTAPYR
HHHCCCHHHEEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCEE
VGYPVSDTIGGMTAAFSIAASLADTERTEGYFLDVSMLEATLVTMGWVVSNHLVAGKDPA
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCEECCCCCC
PMGNENMTASPSGTFRTGDGPLNIAANKQEQFEAVCRVVGRPELATDPRFAERQSRLANR
CCCCCCCCCCCCCCEECCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AALTAELEAELAKKSATDWWQLLNEAGVPAGPVLKVPDTLALPQVRDRGMIGAFENVPGV
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCCCCCCHHCCCCEECHHCCCCC
GRDIRLLRTGFKVNGQAPSVDTPPPQLGEHTDDILGELGYDAAAIDTLKQERAL
CCHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]