Click here to switch to the map view.

The map label for this gene is 94312978

Identifier: 94312978

GI number: 94312978

Start: 616539

End: 617531

Strand: Reverse

Name: 94312978

Synonym: Rmet_4050

Alternate gene names: NA

Gene position: 617531-616539 (Counterclockwise)

Preceding gene: 94312979

Following gene: 94312977

Centisome position: 23.93

GC content: 66.87

Gene sequence:

>993_bases
ATGAACCGTCAACCTGCCCCCCATGCGGAGCTGCTGCCCGGCACGCCCTGGCATACCGGCGAGCGCATCCTGCAATCCCG
GGCCGGCGTGGAAGAGCGTCTGGCCGAAGTGGGTCCGCGCGTGGTGCGTGATTACATGCCCGACCAGCATCGCGAATTCT
TCGCGATGCTGCCTTCCGTCGTCATTGGCGCCGTGGCCCCGGACGGCCACGTCTGGGCCACCCTGCGCGCGGGACAGCCC
GGCTTCCTCCAATCGCCCAATCCGTACCTGCTGGAAGTCGCGAGCCCGCGCGATGCCGATGATCCCGCCGACAGTGGTAT
GGAAGACGGCAACGCCATCGCGCTGCTCGGCCTCGACCCAATGACCCGCCGCCGCAACCGGCTGAACGGCATCGTGCGCC
GCGATGACGCGCGCGGCTTTGGCGTGACGGTCGGACAGAGCTTCGGCAATTGCCCGCAGTACATTCAGAAGCGCGAGTTC
GTGGTCACGCGTGACCACGCGACGCCAGGCACCGTCGCGCCCCAGATCCTGACCGCACTCGATGCTCGGGCGCGGACGTT
GATCCGCCATGCCGATTCGTTCTTCGTCGCGACTTATGTGGATCTGCCGGGAGGACGCCAGGTGGATGTATCCCATCGTG
GCGGCCGACCCGGCTTCGTGCGCGTGGATGCCGATGGCAGCCTGACGATTCCGGACTTCCCCGGCAATACGTTCTTCAAT
ACGCTTGGCAACATGCTGGTGAATCCGGTGGCGGGACTGGTGTTCGTCAGCTATCCGACCGGCGACCTGCTGCAGATGAC
GGGCCGCGCCGAGGTCATCACCGATTCGCCCGAGATCGGCACTGTCGAGGGTGCGGAGCGGCTGTGGCGCTTTTTCCCCC
AGCAGATCGTGCGCCGCGATCGGGCGCTGCCGCTGCGCTGGGATTTCATGCCCGGCGGCGAATCGCCGCAGGCGCTGCGG
ACTGGCGTCTGGCCCGGAGATCCAGCTTCATGA

Upstream 100 bases:

>100_bases
GGCTTCGTGCCGATTGTGAAAAGCCCGGTCGGACTCGAAGCCTGAATCCGCCTGCCTGCCTGAAATCGCCTGTCCGAGAA
GTCGCCACCTGGAGCGCGCC

Downstream 100 bases:

>100_bases
CAGGAACATGAAACCCCGACGGGTGTCAGGGAGCGCAGTGCCTGTGCCACAATCGCGCGACTTGGAGGTCCGCGCGTTCG
GTGATCAGGATGTGGAAATC

Product: putative pyridoxine oxidase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNRQPAPHAELLPGTPWHTGERILQSRAGVEERLAEVGPRVVRDYMPDQHREFFAMLPSVVIGAVAPDGHVWATLRAGQP
GFLQSPNPYLLEVASPRDADDPADSGMEDGNAIALLGLDPMTRRRNRLNGIVRRDDARGFGVTVGQSFGNCPQYIQKREF
VVTRDHATPGTVAPQILTALDARARTLIRHADSFFVATYVDLPGGRQVDVSHRGGRPGFVRVDADGSLTIPDFPGNTFFN
TLGNMLVNPVAGLVFVSYPTGDLLQMTGRAEVITDSPEIGTVEGAERLWRFFPQQIVRRDRALPLRWDFMPGGESPQALR
TGVWPGDPAS

Sequences:

>Translated_330_residues
MNRQPAPHAELLPGTPWHTGERILQSRAGVEERLAEVGPRVVRDYMPDQHREFFAMLPSVVIGAVAPDGHVWATLRAGQP
GFLQSPNPYLLEVASPRDADDPADSGMEDGNAIALLGLDPMTRRRNRLNGIVRRDDARGFGVTVGQSFGNCPQYIQKREF
VVTRDHATPGTVAPQILTALDARARTLIRHADSFFVATYVDLPGGRQVDVSHRGGRPGFVRVDADGSLTIPDFPGNTFFN
TLGNMLVNPVAGLVFVSYPTGDLLQMTGRAEVITDSPEIGTVEGAERLWRFFPQQIVRRDRALPLRWDFMPGGESPQALR
TGVWPGDPAS
>Mature_330_residues
MNRQPAPHAELLPGTPWHTGERILQSRAGVEERLAEVGPRVVRDYMPDQHREFFAMLPSVVIGAVAPDGHVWATLRAGQP
GFLQSPNPYLLEVASPRDADDPADSGMEDGNAIALLGLDPMTRRRNRLNGIVRRDDARGFGVTVGQSFGNCPQYIQKREF
VVTRDHATPGTVAPQILTALDARARTLIRHADSFFVATYVDLPGGRQVDVSHRGGRPGFVRVDADGSLTIPDFPGNTFFN
TLGNMLVNPVAGLVFVSYPTGDLLQMTGRAEVITDSPEIGTVEGAERLWRFFPQQIVRRDRALPLRWDFMPGGESPQALR
TGVWPGDPAS

Specific function: Unknown

COG id: COG3576

COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36162; Mature: 36162

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQPAPHAELLPGTPWHTGERILQSRAGVEERLAEVGPRVVRDYMPDQHREFFAMLPSV
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHH
VIGAVAPDGHVWATLRAGQPGFLQSPNPYLLEVASPRDADDPADSGMEDGNAIALLGLDP
HHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCH
MTRRRNRLNGIVRRDDARGFGVTVGQSFGNCPQYIQKREFVVTRDHATPGTVAPQILTAL
HHHHHHHHCCCEEECCCCCCEEEECCCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHH
DARARTLIRHADSFFVATYVDLPGGRQVDVSHRGGRPGFVRVDADGSLTIPDFPGNTFFN
HHHHHHHHHHCCCEEEEEEEECCCCCEEECCCCCCCCCEEEECCCCCEECCCCCCCHHHH
TLGNMLVNPVAGLVFVSYPTGDLLQMTGRAEVITDSPEIGTVEGAERLWRFFPQQIVRRD
HHHHHHHHHHCCEEEEECCCCHHHEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
RALPLRWDFMPGGESPQALRTGVWPGDPAS
CCCCEEEECCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNRQPAPHAELLPGTPWHTGERILQSRAGVEERLAEVGPRVVRDYMPDQHREFFAMLPSV
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHH
VIGAVAPDGHVWATLRAGQPGFLQSPNPYLLEVASPRDADDPADSGMEDGNAIALLGLDP
HHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCH
MTRRRNRLNGIVRRDDARGFGVTVGQSFGNCPQYIQKREFVVTRDHATPGTVAPQILTAL
HHHHHHHHCCCEEECCCCCCEEEECCCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHH
DARARTLIRHADSFFVATYVDLPGGRQVDVSHRGGRPGFVRVDADGSLTIPDFPGNTFFN
HHHHHHHHHHCCCEEEEEEEECCCCCEEECCCCCCCCCEEEECCCCCEECCCCCCCHHHH
TLGNMLVNPVAGLVFVSYPTGDLLQMTGRAEVITDSPEIGTVEGAERLWRFFPQQIVRRD
HHHHHHHHHHCCEEEEECCCCHHHEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
RALPLRWDFMPGGESPQALRTGVWPGDPAS
CCCCEEEECCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA