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The map label for this gene is fimF [C]

Identifier: 94312933

GI number: 94312933

Start: 577169

End: 578071

Strand: Direct

Name: fimF [C]

Synonym: Rmet_4005

Alternate gene names: 94312933

Gene position: 577169-578071 (Clockwise)

Preceding gene: 94312932

Following gene: 291481505

Centisome position: 22.37

GC content: 55.48

Gene sequence:

>903_bases
GTGATTTACACCGTGTCTGGCGACTGGGATGCTTACGGCGGTCATAATGCGGGCTGGTGCCAAAATCTTCCGGCTGGGAA
TCTAAGCCCTATCGGAAATCTCCGGGTCAAGACAAAAGTCTATTTCTCGATGCTAGGCACCCCGGTGCAAAGGTATTGGA
ATGATGTTTACCCCACGAATTTGGCGGGCGTTGGCGTGCGGATCTATATCTGGAATCCGAGTTCGTATTACGGCACACCC
ACCAGAGCGACCGCTATCCCACTGTCGTTCACCGCAGACTTGCAGAATTCCCTGCCATCCATGCGACCCGCATATGGCAC
AGGCGGTCTGCGAGTACGCGTGGAAGTCATCAAGACAGCGCCAAATTGGCAGGCGGGATCACTTCGATTTGTTGGGGGCC
AGTTGCGAGTGACCGCAGCCGATAACGCAAGCAACAGCGTGACTCTCACGCAAGTCAGCATCATGGGAACAATGAATACG
CGTTCCTGCTCGGTTGCCGCGGGCTCCCGGAATGTAAGCGTCAATATGCGAGAGGTTGCCTATCCAAACGGGTTCAGTGG
GCGTCAGGCAGGTGCTTACGGACCCACGATACCGTTCCGGATTACTATGAATTGCGTTTCTGGCCCGAGAACATCTATCC
AGTTCGATCCAGTGACGGCGATAGCCGGAAAGCCCGATATCCTTGGCCTCACACCTAACTCATCGAATGCCTCGGGCATA
GGCGTGCAATTGCTGAGTTCGGTTGGAGTACCGCTGCAACTGCGGACGCCGGTGCTGCTGACAGCGCGGGCGCCAGATGG
TGCAAGTACCTACAGTTTTGGTGGACGATATATTTTGACTGGCGAGCCTGTAAGAGGCGGGCGAGCGGATGCAACTTCGA
TCTTCACCATGGTGTACGAGTAG

Upstream 100 bases:

>100_bases
CTCCCCGCTACAAGTCCTCGCTCAGGTTCTGGCCAATCCCACGGACCGGCTTCCTGTTCAATAACCAAGGGGTGTTGCGC
TTCGCACTTGAAACCGCCCG

Downstream 100 bases:

>100_bases
GGTACGAGCACTGAGTATCTGATTGTCTGGTCATGAACAGAGCGTGTTGTACATCTTGGGTGCAATCGCTCCGAGGGTCC
GCTTGGGCCCGTTGAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MIYTVSGDWDAYGGHNAGWCQNLPAGNLSPIGNLRVKTKVYFSMLGTPVQRYWNDVYPTNLAGVGVRIYIWNPSSYYGTP
TRATAIPLSFTADLQNSLPSMRPAYGTGGLRVRVEVIKTAPNWQAGSLRFVGGQLRVTAADNASNSVTLTQVSIMGTMNT
RSCSVAAGSRNVSVNMREVAYPNGFSGRQAGAYGPTIPFRITMNCVSGPRTSIQFDPVTAIAGKPDILGLTPNSSNASGI
GVQLLSSVGVPLQLRTPVLLTARAPDGASTYSFGGRYILTGEPVRGGRADATSIFTMVYE

Sequences:

>Translated_300_residues
MIYTVSGDWDAYGGHNAGWCQNLPAGNLSPIGNLRVKTKVYFSMLGTPVQRYWNDVYPTNLAGVGVRIYIWNPSSYYGTP
TRATAIPLSFTADLQNSLPSMRPAYGTGGLRVRVEVIKTAPNWQAGSLRFVGGQLRVTAADNASNSVTLTQVSIMGTMNT
RSCSVAAGSRNVSVNMREVAYPNGFSGRQAGAYGPTIPFRITMNCVSGPRTSIQFDPVTAIAGKPDILGLTPNSSNASGI
GVQLLSSVGVPLQLRTPVLLTARAPDGASTYSFGGRYILTGEPVRGGRADATSIFTMVYE
>Mature_300_residues
MIYTVSGDWDAYGGHNAGWCQNLPAGNLSPIGNLRVKTKVYFSMLGTPVQRYWNDVYPTNLAGVGVRIYIWNPSSYYGTP
TRATAIPLSFTADLQNSLPSMRPAYGTGGLRVRVEVIKTAPNWQAGSLRFVGGQLRVTAADNASNSVTLTQVSIMGTMNT
RSCSVAAGSRNVSVNMREVAYPNGFSGRQAGAYGPTIPFRITMNCVSGPRTSIQFDPVTAIAGKPDILGLTPNSSNASGI
GVQLLSSVGVPLQLRTPVLLTARAPDGASTYSFGGRYILTGEPVRGGRADATSIFTMVYE

Specific function: Involved In Regulation Of Length And Mediation Of Adhesion Of Type 1 Fimbriae (But Not Necessary For The Production Of Fimbriae). Involved In The Integration Of Fimh In The Fimbriae. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790773, Length=156, Percent_Identity=32.6923076923077, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31890; Mature: 31890

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYTVSGDWDAYGGHNAGWCQNLPAGNLSPIGNLRVKTKVYFSMLGTPVQRYWNDVYPTN
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHCCHHHHHHCCCCCCC
LAGVGVRIYIWNPSSYYGTPTRATAIPLSFTADLQNSLPSMRPAYGTGGLRVRVEVIKTA
CCCCEEEEEEECCCCCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCEEEEEEEEEEC
PNWQAGSLRFVGGQLRVTAADNASNSVTLTQVSIMGTMNTRSCSVAAGSRNVSVNMREVA
CCCCCCCEEEECCEEEEEECCCCCCEEEEEEEEEEEECCCCEEEEEECCCEEEEEEHHEE
YPNGFSGRQAGAYGPTIPFRITMNCVSGPRTSIQFDPVTAIAGKPDILGLTPNSSNASGI
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCEEEECCCCCEEEECCCCCCCCCH
GVQLLSSVGVPLQLRTPVLLTARAPDGASTYSFGGRYILTGEPVRGGRADATSIFTMVYE
HHHHHHHCCCCEEECCCEEEEEECCCCCCEECCCCEEEEECCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MIYTVSGDWDAYGGHNAGWCQNLPAGNLSPIGNLRVKTKVYFSMLGTPVQRYWNDVYPTN
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHCCHHHHHHCCCCCCC
LAGVGVRIYIWNPSSYYGTPTRATAIPLSFTADLQNSLPSMRPAYGTGGLRVRVEVIKTA
CCCCEEEEEEECCCCCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCEEEEEEEEEEC
PNWQAGSLRFVGGQLRVTAADNASNSVTLTQVSIMGTMNTRSCSVAAGSRNVSVNMREVA
CCCCCCCEEEECCEEEEEECCCCCCEEEEEEEEEEEECCCCEEEEEECCCEEEEEEHHEE
YPNGFSGRQAGAYGPTIPFRITMNCVSGPRTSIQFDPVTAIAGKPDILGLTPNSSNASGI
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCEEEECCCCCEEEECCCCCCCCCH
GVQLLSSVGVPLQLRTPVLLTARAPDGASTYSFGGRYILTGEPVRGGRADATSIFTMVYE
HHHHHHHCCCCEEECCCEEEEEECCCCCCEECCCCEEEEECCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA