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The map label for this gene is ligJ

Identifier: 94312637

GI number: 94312637

Start: 246580

End: 247605

Strand: Reverse

Name: ligJ

Synonym: Rmet_3705

Alternate gene names: NA

Gene position: 247605-246580 (Counterclockwise)

Preceding gene: 94312638

Following gene: 94312636

Centisome position: 9.6

GC content: 61.99

Gene sequence:

>1026_bases
ATGATCATCGATTGCCACGGGCACTTCACCACCGCCCCCAAGGCCCTGGAAGACTGGCGCCAACGCCAGATCGCCAGCCT
GAACATCCCTGCGCTCGCGCCTTCCGTCAGTGAACTGCGCATCAGTGATGACGAACTACGTGACGCCATCGCCAGCAATC
AGCTTCGCCTGATGCGCGAGCGTGGGATGGACCTGACGATCTTCTCGCCGCGCGCGTCGTTCATGGCGCACCACATCGGC
AGCTTCGAAACCAGCGCCACGTGGGCCGCCATCTGCAACACGCTCTGCCACCGTGTCAGCGAGCTGTTCCCCGACCAGTT
CGTCGGCGCCGCCATGCTGCCGCAATCGCCGGGAATCGATACCAAGAGCTGCGTCAAGGAACTCGAACGTTGCGTGCTCG
AGTACGGCTTTGTTGGCGTGAACCTGAATCCAGATCCGTCTGGCGGACACTGGACATCGCCACCGCTATCCGATCCGTAC
TGGTATCCGATCTACGAGAAGCTCGTCGAACTCGACGTGCCGGCCATGATTCACGTCAGCACGAGCTGCAACGCGTGCTT
CCACACCACTGGCGCGCACTACCTGAACGCCGACACCACCGCATTCATGCAGGTGCTGACCAGCGACCTGTTTCGGCGCT
TTCCGACGCTGAAGTTCGTGATTCCGCACGGTGGCGGCGCGGTGCCCTACCACTGGGGCCGGTTCCGTGGGTTGGCGCAG
GAGATGAAGCTGCCGCCGCTTGGCGAACACCTGCTCAATAACGTCTTCTTCGATACATGCGTCTATCACCAGCCTGGCAT
CGACCTGCTGACGCGCGTGATACCGGTCAAGAACGTGCTGTTCGCCTCGGAGATGATCGGCGCGGTACGTGGCATCGACC
CCGAGACCGGCCACTACTACGACGATACGCGGCGCTACATCGATCAGGCCGCGCTCTCTGACGAGGAACGTCACCAGATT
TACGAAGGCAACGCGCGGCGCGTTTACAGCCGACTTGACGCGCGACTCAAGGCACGTGGCCACTAG

Upstream 100 bases:

>100_bases
GATCGATCGTACGTAGCGCGCTGATCCGCACCGCGCGTCCCATCATGCGCGGCGAGGTACTGGTGCCGACCAGCGCATGG
CCTCTGTCTGACGAACTCCC

Downstream 100 bases:

>100_bases
GCACGCGGCCGCCAGGCAGCGCCATCGAAGCCAGGCATCAACGTTGTTCCAGAAAAATATCTAACGGAGGAGAAGAAGAT
GAAACTGCGCCACCTGGCGC

Product: 4-oxalomesaconate hydratase

Products: NA

Alternate protein names: 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; Aminocarboxymuconate-Semialdehyde Decarboxylase; FLDW Protein; Hydrolase; LOW QUALITY PROTEIN 4-Oxalomesaconate Hydratase

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MIIDCHGHFTTAPKALEDWRQRQIASLNIPALAPSVSELRISDDELRDAIASNQLRLMRERGMDLTIFSPRASFMAHHIG
SFETSATWAAICNTLCHRVSELFPDQFVGAAMLPQSPGIDTKSCVKELERCVLEYGFVGVNLNPDPSGGHWTSPPLSDPY
WYPIYEKLVELDVPAMIHVSTSCNACFHTTGAHYLNADTTAFMQVLTSDLFRRFPTLKFVIPHGGGAVPYHWGRFRGLAQ
EMKLPPLGEHLLNNVFFDTCVYHQPGIDLLTRVIPVKNVLFASEMIGAVRGIDPETGHYYDDTRRYIDQAALSDEERHQI
YEGNARRVYSRLDARLKARGH

Sequences:

>Translated_341_residues
MIIDCHGHFTTAPKALEDWRQRQIASLNIPALAPSVSELRISDDELRDAIASNQLRLMRERGMDLTIFSPRASFMAHHIG
SFETSATWAAICNTLCHRVSELFPDQFVGAAMLPQSPGIDTKSCVKELERCVLEYGFVGVNLNPDPSGGHWTSPPLSDPY
WYPIYEKLVELDVPAMIHVSTSCNACFHTTGAHYLNADTTAFMQVLTSDLFRRFPTLKFVIPHGGGAVPYHWGRFRGLAQ
EMKLPPLGEHLLNNVFFDTCVYHQPGIDLLTRVIPVKNVLFASEMIGAVRGIDPETGHYYDDTRRYIDQAALSDEERHQI
YEGNARRVYSRLDARLKARGH
>Mature_341_residues
MIIDCHGHFTTAPKALEDWRQRQIASLNIPALAPSVSELRISDDELRDAIASNQLRLMRERGMDLTIFSPRASFMAHHIG
SFETSATWAAICNTLCHRVSELFPDQFVGAAMLPQSPGIDTKSCVKELERCVLEYGFVGVNLNPDPSGGHWTSPPLSDPY
WYPIYEKLVELDVPAMIHVSTSCNACFHTTGAHYLNADTTAFMQVLTSDLFRRFPTLKFVIPHGGGAVPYHWGRFRGLAQ
EMKLPPLGEHLLNNVFFDTCVYHQPGIDLLTRVIPVKNVLFASEMIGAVRGIDPETGHYYDDTRRYIDQAALSDEERHQI
YEGNARRVYSRLDARLKARGH

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI109715856, Length=351, Percent_Identity=24.7863247863248, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38399; Mature: 38399

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDCHGHFTTAPKALEDWRQRQIASLNIPALAPSVSELRISDDELRDAIASNQLRLMRE
CEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
RGMDLTIFSPRASFMAHHIGSFETSATWAAICNTLCHRVSELFPDQFVGAAMLPQSPGID
CCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC
TKSCVKELERCVLEYGFVGVNLNPDPSGGHWTSPPLSDPYWYPIYEKLVELDVPAMIHVS
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEC
TSCNACFHTTGAHYLNADTTAFMQVLTSDLFRRFPTLKFVIPHGGGAVPYHWGRFRGLAQ
CCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHH
EMKLPPLGEHLLNNVFFDTCVYHQPGIDLLTRVIPVKNVLFASEMIGAVRGIDPETGHYY
HCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DDTRRYIDQAALSDEERHQIYEGNARRVYSRLDARLKARGH
HHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIIDCHGHFTTAPKALEDWRQRQIASLNIPALAPSVSELRISDDELRDAIASNQLRLMRE
CEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
RGMDLTIFSPRASFMAHHIGSFETSATWAAICNTLCHRVSELFPDQFVGAAMLPQSPGID
CCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC
TKSCVKELERCVLEYGFVGVNLNPDPSGGHWTSPPLSDPYWYPIYEKLVELDVPAMIHVS
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEC
TSCNACFHTTGAHYLNADTTAFMQVLTSDLFRRFPTLKFVIPHGGGAVPYHWGRFRGLAQ
CCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHH
EMKLPPLGEHLLNNVFFDTCVYHQPGIDLLTRVIPVKNVLFASEMIGAVRGIDPETGHYY
HCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DDTRRYIDQAALSDEERHQIYEGNARRVYSRLDARLKARGH
HHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA