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The map label for this gene is 94312636

Identifier: 94312636

GI number: 94312636

Start: 245410

End: 246501

Strand: Reverse

Name: 94312636

Synonym: Rmet_3704

Alternate gene names: NA

Gene position: 246501-245410 (Counterclockwise)

Preceding gene: 94312637

Following gene: 94312609

Centisome position: 9.55

GC content: 67.31

Gene sequence:

>1092_bases
ATGAAACTGCGCCACCTGGCGCTGGCGGCCGCGCTCGGCCTGCCCGCCATCGCCAACGCCCAATCCGTGACGCTCTACGG
CGTCATCGACACCGGCATCGAGTACCTCAACCACGTCGGCACCGCCAGCAACTCCGTCGTCAAGATGGCCAACCTCAGCG
GCACCGTACCCTCCCGCTGGGGCCTGCGCGGCACCGAGGACCTCGGCAGCGGCATGAAGGCTAACTTCGTGCTCGAATCC
GGATTCGCCCCCGACAGCGGCGTCTCCAACCAGGGCGGTCGCCTCTTCGGCCGCCAGGCATGGGTCGGCCTCTCCGGCAA
CTGGGGCCAGGTCAGCCTCGGCCGCCAGTACACCATGCTGTTCTGGGCCACGCTCGACTCCGACATTCTCGGCCCTAACG
CCTACGGTTCCAGCTCGCTCGACAACTACCTGCCCAACGCGCGGGCCGACAACGCCATCGCCTACAAGGGCAAATTCGGC
GGCTTCACCATTGGCGCTACCTACAGCTTCGGGCGCGACACCGTCAACGCTGGTCCCAGCCCCTCCGGCACCAACTGCGG
CGGCGAGAACCCCGCCGACAAGACCGCCTGCCGCGAATGGTCGGCCATGCTCGGGTATGAAACCAACTGGTGGGGCATCC
TGGGCGCCTATGACTCGCAGCGCGGCGGGCCCGGCGCCTTCGGCGGCCTGACCTCGAGTTCGCTCAAGGATGATCGCGCC
ACTCTCGGTGGCTACATGCTCGTGGACCGCGCCAAGATCGGCGCCGGCTGGATCGGGCGTCGCAACGGCGCCATCGCCAC
GCCGCGCAGCGACATGTTCTACGCCGGTGTCGCCTACGACATCACTCCTGCGGTGACGCTCTCCGGCGAGGCGTTCTACC
TCAAGTACCACAACAGCGCCGACAAGGCGTGGCTGGGCGCGTTACGTGCCAGCTACGCCTTCTCCAAGCGCACGTCCGTC
TACACCACGCTTGGCTATATCGACAACGGCGGCAAGCTGGCGCTGTCCGTGGACAGCGCTTCCACCGGCGCATCGCCCGC
GCCTGGCGGCTCGCAGTTCGGCGCCATGCTTGGCATGAAGCACGTCTTCTGA

Upstream 100 bases:

>100_bases
ACTCAAGGCACGTGGCCACTAGGCACGCGGCCGCCAGGCAGCGCCATCGAAGCCAGGCATCAACGTTGTTCCAGAAAAAT
ATCTAACGGAGGAGAAGAAG

Downstream 100 bases:

>100_bases
CGGCACTTCATTCGTCGGCTTGAGACTGGGCTCCACCTGCCCGCTTCTGGTCATGACTGGCTGGGAGCGGGCTTTTTTTG
CGACTGCAGTCCTGTGCCGA

Product: outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKLRHLALAAALGLPAIANAQSVTLYGVIDTGIEYLNHVGTASNSVVKMANLSGTVPSRWGLRGTEDLGSGMKANFVLES
GFAPDSGVSNQGGRLFGRQAWVGLSGNWGQVSLGRQYTMLFWATLDSDILGPNAYGSSSLDNYLPNARADNAIAYKGKFG
GFTIGATYSFGRDTVNAGPSPSGTNCGGENPADKTACREWSAMLGYETNWWGILGAYDSQRGGPGAFGGLTSSSLKDDRA
TLGGYMLVDRAKIGAGWIGRRNGAIATPRSDMFYAGVAYDITPAVTLSGEAFYLKYHNSADKAWLGALRASYAFSKRTSV
YTTLGYIDNGGKLALSVDSASTGASPAPGGSQFGAMLGMKHVF

Sequences:

>Translated_363_residues
MKLRHLALAAALGLPAIANAQSVTLYGVIDTGIEYLNHVGTASNSVVKMANLSGTVPSRWGLRGTEDLGSGMKANFVLES
GFAPDSGVSNQGGRLFGRQAWVGLSGNWGQVSLGRQYTMLFWATLDSDILGPNAYGSSSLDNYLPNARADNAIAYKGKFG
GFTIGATYSFGRDTVNAGPSPSGTNCGGENPADKTACREWSAMLGYETNWWGILGAYDSQRGGPGAFGGLTSSSLKDDRA
TLGGYMLVDRAKIGAGWIGRRNGAIATPRSDMFYAGVAYDITPAVTLSGEAFYLKYHNSADKAWLGALRASYAFSKRTSV
YTTLGYIDNGGKLALSVDSASTGASPAPGGSQFGAMLGMKHVF
>Mature_363_residues
MKLRHLALAAALGLPAIANAQSVTLYGVIDTGIEYLNHVGTASNSVVKMANLSGTVPSRWGLRGTEDLGSGMKANFVLES
GFAPDSGVSNQGGRLFGRQAWVGLSGNWGQVSLGRQYTMLFWATLDSDILGPNAYGSSSLDNYLPNARADNAIAYKGKFG
GFTIGATYSFGRDTVNAGPSPSGTNCGGENPADKTACREWSAMLGYETNWWGILGAYDSQRGGPGAFGGLTSSSLKDDRA
TLGGYMLVDRAKIGAGWIGRRNGAIATPRSDMFYAGVAYDITPAVTLSGEAFYLKYHNSADKAWLGALRASYAFSKRTSV
YTTLGYIDNGGKLALSVDSASTGASPAPGGSQFGAMLGMKHVF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37998; Mature: 37998

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRHLALAAALGLPAIANAQSVTLYGVIDTGIEYLNHVGTASNSVVKMANLSGTVPSRW
CCHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
GLRGTEDLGSGMKANFVLESGFAPDSGVSNQGGRLFGRQAWVGLSGNWGQVSLGRQYTML
CCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEEEEECCCCCEEECCCEEEEE
FWATLDSDILGPNAYGSSSLDNYLPNARADNAIAYKGKFGGFTIGATYSFGRDTVNAGPS
EEEECCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCC
PSGTNCGGENPADKTACREWSAMLGYETNWWGILGAYDSQRGGPGAFGGLTSSSLKDDRA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHH
TLGGYMLVDRAKIGAGWIGRRNGAIATPRSDMFYAGVAYDITPAVTLSGEAFYLKYHNSA
HCCCEEEEEEEECCCCEEECCCCCEECCCCCEEEEEEEEECCCEEEECCCEEEEEEECCC
DKAWLGALRASYAFSKRTSVYTTLGYIDNGGKLALSVDSASTGASPAPGGSQFGAMLGMK
CHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
HVF
HCC
>Mature Secondary Structure
MKLRHLALAAALGLPAIANAQSVTLYGVIDTGIEYLNHVGTASNSVVKMANLSGTVPSRW
CCHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
GLRGTEDLGSGMKANFVLESGFAPDSGVSNQGGRLFGRQAWVGLSGNWGQVSLGRQYTML
CCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEEEEECCCCCEEECCCEEEEE
FWATLDSDILGPNAYGSSSLDNYLPNARADNAIAYKGKFGGFTIGATYSFGRDTVNAGPS
EEEECCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCC
PSGTNCGGENPADKTACREWSAMLGYETNWWGILGAYDSQRGGPGAFGGLTSSSLKDDRA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHH
TLGGYMLVDRAKIGAGWIGRRNGAIATPRSDMFYAGVAYDITPAVTLSGEAFYLKYHNSA
HCCCEEEEEEEECCCCEEECCCCCEECCCCCEEEEEEEEECCCEEEECCCEEEEEEECCC
DKAWLGALRASYAFSKRTSVYTTLGYIDNGGKLALSVDSASTGASPAPGGSQFGAMLGMK
CHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
HVF
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]