| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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Identifier: 94312607
GI number: 94312607
Start: 212143
End: 213219
Strand: Direct
Name: int
Synonym: Rmet_3675
Alternate gene names: NA
Gene position: 212143-213219 (Clockwise)
Preceding gene: 94312605
Following gene: 94312608
Centisome position: 8.22
GC content: 67.6
Gene sequence:
>1077_bases ATGACCCAGGCAAGTGCCGATTTCGTTACGGCGGACGGCGAGACACCGGCCACCTCCGGCGATCTGTTCGATGCTGACCT CGACGCTTGGCGAAAGCACCCGGACCGCGCCTTCGACGGCTGGCTTGCGCGACACGGTTTTCGCCACGGCACCGCCGTGG TCTATCGGGCGATGTGGGGCAAGCTGCTGCGCTGGTCAGGTGAGCAAGGACTAACACCGCTGACGTGGTCGGCCGCACAG ATCGGCGCGTTCCTGGATGCCCAGAATCTGCACAAGCGTCACCGCTACCGTTACGCGCGGCTGATCGAACGCGTTTTCCA TCATCTGTCCCAGTTGCAGCAGAATCTGCACAACCCCGCCAGCCAGGCCGTCAAGTCGCATCTCGCCGACGGCGAGAACG ATCCGACCGCCTTTCTGTTACCTGGCGAGCGCGACCTGCTGGTGGCCCGCATCCTGGCACCGGCGCCCGAGCCGGTTGCC GAGGCCGCCCGCCCGGACAGCCAGGCCATTTCGCCAAAGCAATGGAAACGCGCCCGCGATGTCGCGCTTCTCGCGGTCCT GCTGGGTGGCGGACTCAAGGTGGCGGAGGCGCGGGCGCTGCGCGTGGAGGCGATCGAAGGTTTGGGTGGCGGCGCGATGG CGATTCGCATGGTCCGGACGGACAACGGGCGGGCGTACACCGTCCCCTTGTTCGGGTTTGTCCATGCACCGCTGCGCCGC TGGCTGGAGACGCGGGCGGCAGCGGAGACATTAGGCGATCTCGTGTTCCCGGCCATGACCAACGGCCGTGCCATGCACGC GGCATCGGTGTATCGCCGCGTCGAGATCCTGCTCGAAGAGGCCGGCGTGCTGGCGGGCCGCAGCGAACGGGCGTCGCCCC AGACACTGCGGAATACCTGCGGCGCCATGCACTTCGATGCAGGAACGCCGCCGGCGGCGGTGGCCCAGTTGCTGGGGATG CGCGATATGGAGTCTGGCTGGCGGCTGCGGGCAGCTTATGAAGCGTGGCAGGCCCGCACCGGGCTTCCGGTCATGGGCAG GCCGCTTTCGCGCCCGAATGGTGGAAGCGGCGCATGA
Upstream 100 bases:
>100_bases CCATGTGCAACTGCCGGAGGGCTACGATCGCGGGATCCAGTGGCCCTTTGTCTACAATGAGGACGTTGCTTTGCATACTC AGAGCGGGAGAGCGTTGGTC
Downstream 100 bases:
>100_bases TACATATCGCAGCCGTAAAGACGCACGGTTATGATGGCAGCCCACTCGGTGAGCGAGCGACGTGAACCCAATCCAGATCC TTGAAGATTTCCATGGCTGA
Product: phage integrase / Tyr recombinase protein
Products: NA
Alternate protein names: Integrase/Recombinase Protein; Phage Integrase Family Protein; Phage Integrase; DNA Integration/Recombination/Inversion Protein; Phage Integrase / Tyr Recombinase Protein; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Or Site-Specific Recombinase
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTQASADFVTADGETPATSGDLFDADLDAWRKHPDRAFDGWLARHGFRHGTAVVYRAMWGKLLRWSGEQGLTPLTWSAAQ IGAFLDAQNLHKRHRYRYARLIERVFHHLSQLQQNLHNPASQAVKSHLADGENDPTAFLLPGERDLLVARILAPAPEPVA EAARPDSQAISPKQWKRARDVALLAVLLGGGLKVAEARALRVEAIEGLGGGAMAIRMVRTDNGRAYTVPLFGFVHAPLRR WLETRAAAETLGDLVFPAMTNGRAMHAASVYRRVEILLEEAGVLAGRSERASPQTLRNTCGAMHFDAGTPPAAVAQLLGM RDMESGWRLRAAYEAWQARTGLPVMGRPLSRPNGGSGA
Sequences:
>Translated_358_residues MTQASADFVTADGETPATSGDLFDADLDAWRKHPDRAFDGWLARHGFRHGTAVVYRAMWGKLLRWSGEQGLTPLTWSAAQ IGAFLDAQNLHKRHRYRYARLIERVFHHLSQLQQNLHNPASQAVKSHLADGENDPTAFLLPGERDLLVARILAPAPEPVA EAARPDSQAISPKQWKRARDVALLAVLLGGGLKVAEARALRVEAIEGLGGGAMAIRMVRTDNGRAYTVPLFGFVHAPLRR WLETRAAAETLGDLVFPAMTNGRAMHAASVYRRVEILLEEAGVLAGRSERASPQTLRNTCGAMHFDAGTPPAAVAQLLGM RDMESGWRLRAAYEAWQARTGLPVMGRPLSRPNGGSGA >Mature_357_residues TQASADFVTADGETPATSGDLFDADLDAWRKHPDRAFDGWLARHGFRHGTAVVYRAMWGKLLRWSGEQGLTPLTWSAAQI GAFLDAQNLHKRHRYRYARLIERVFHHLSQLQQNLHNPASQAVKSHLADGENDPTAFLLPGERDLLVARILAPAPEPVAE AARPDSQAISPKQWKRARDVALLAVLLGGGLKVAEARALRVEAIEGLGGGAMAIRMVRTDNGRAYTVPLFGFVHAPLRRW LETRAAAETLGDLVFPAMTNGRAMHAASVYRRVEILLEEAGVLAGRSERASPQTLRNTCGAMHFDAGTPPAAVAQLLGMR DMESGWRLRAAYEAWQARTGLPVMGRPLSRPNGGSGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39050; Mature: 38919
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQASADFVTADGETPATSGDLFDADLDAWRKHPDRAFDGWLARHGFRHGTAVVYRAMWG CCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHH KLLRWSGEQGLTPLTWSAAQIGAFLDAQNLHKRHRYRYARLIERVFHHLSQLQQNLHNPA HHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SQAVKSHLADGENDPTAFLLPGERDLLVARILAPAPEPVAEAARPDSQAISPKQWKRARD HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHH VALLAVLLGGGLKVAEARALRVEAIEGLGGGAMAIRMVRTDNGRAYTVPLFGFVHAPLRR HHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHH WLETRAAAETLGDLVFPAMTNGRAMHAASVYRRVEILLEEAGVLAGRSERASPQTLRNTC HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH GAMHFDAGTPPAAVAQLLGMRDMESGWRLRAAYEAWQARTGLPVMGRPLSRPNGGSGA CCEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQASADFVTADGETPATSGDLFDADLDAWRKHPDRAFDGWLARHGFRHGTAVVYRAMWG CCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHH KLLRWSGEQGLTPLTWSAAQIGAFLDAQNLHKRHRYRYARLIERVFHHLSQLQQNLHNPA HHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SQAVKSHLADGENDPTAFLLPGERDLLVARILAPAPEPVAEAARPDSQAISPKQWKRARD HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHH VALLAVLLGGGLKVAEARALRVEAIEGLGGGAMAIRMVRTDNGRAYTVPLFGFVHAPLRR HHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHH WLETRAAAETLGDLVFPAMTNGRAMHAASVYRRVEILLEEAGVLAGRSERASPQTLRNTC HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH GAMHFDAGTPPAAVAQLLGMRDMESGWRLRAAYEAWQARTGLPVMGRPLSRPNGGSGA CCEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA