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The map label for this gene is lrp [H]

Identifier: 94312463

GI number: 94312463

Start: 3830569

End: 3831048

Strand: Reverse

Name: lrp [H]

Synonym: Rmet_3532

Alternate gene names: 94312463

Gene position: 3831048-3830569 (Counterclockwise)

Preceding gene: 94312468

Following gene: 94312462

Centisome position: 97.53

GC content: 63.96

Gene sequence:

>480_bases
ATGAACCACGCCGACCTGGACCCCTTCGACCTGGCCTTGCTGGCGGCGCTGCAAGCCGATGGCAGATCCACCCATCAGCA
ACTGGCCGAGCGCGTGCACCTGTCGCCGAGCCAGGTCGGCCGGCGTCTGGCGCGGCTCGAAGCCGACGGGGTGATCACTG
GCTATCGCGTAAACCTGTCGCCACAAGCCCTGGGCCTGGGGGTGCTGGTCTTCATCAGCGTCAAGCTGGCGCACCATGGC
GACACGATCATCGAGCGCTTCGCCGAGGAAATCCTGCTGCTGGAGGAAGTGCAGGAGTGTTACTCGGTGGCGGGCGAGGC
CGATTACCTGATCCGCGTAGTGGTGGCGGATCTGCCCACGCTGGCCGAATTCACGATGAAACGCCTGATGCGCGTACCCG
GTGTGGAGAGCATCCGGTCGAACATTGTGCTGACCGCGCTCAAACGCGAAGGACCGCTGCCACTTTCACATTTGCGCTGA

Upstream 100 bases:

>100_bases
GATCGGATGCTGCATTCAGGCCGCAAAATTGGCCATATTCCGGTTCTTAATGCATATAATCTGCGCATATTTAACATTCA
GTGCGGGATTGATGCGAACC

Downstream 100 bases:

>100_bases
AACGGTCACGCGATCTGAACAAAATGTGCAGAGGCTTGCGCTTGCCATCCGCGCATGTCACCCTCGCCCGGTGGCAAATC
CGGAAAGGGCAAGATGATGT

Product: AsnC/Lrp family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNHADLDPFDLALLAALQADGRSTHQQLAERVHLSPSQVGRRLARLEADGVITGYRVNLSPQALGLGVLVFISVKLAHHG
DTIIERFAEEILLLEEVQECYSVAGEADYLIRVVVADLPTLAEFTMKRLMRVPGVESIRSNIVLTALKREGPLPLSHLR

Sequences:

>Translated_159_residues
MNHADLDPFDLALLAALQADGRSTHQQLAERVHLSPSQVGRRLARLEADGVITGYRVNLSPQALGLGVLVFISVKLAHHG
DTIIERFAEEILLLEEVQECYSVAGEADYLIRVVVADLPTLAEFTMKRLMRVPGVESIRSNIVLTALKREGPLPLSHLR
>Mature_159_residues
MNHADLDPFDLALLAALQADGRSTHQQLAERVHLSPSQVGRRLARLEADGVITGYRVNLSPQALGLGVLVFISVKLAHHG
DTIIERFAEEILLLEEVQECYSVAGEADYLIRVVVADLPTLAEFTMKRLMRVPGVESIRSNIVLTALKREGPLPLSHLR

Specific function: Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operons; lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=150, Percent_Identity=36.6666666666667, Blast_Score=106, Evalue=8e-25,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=37.3333333333333, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI1790182, Length=144, Percent_Identity=27.0833333333333, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17525; Mature: 17525

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHADLDPFDLALLAALQADGRSTHQQLAERVHLSPSQVGRRLARLEADGVITGYRVNLS
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCC
PQALGLGVLVFISVKLAHHGDTIIERFAEEILLLEEVQECYSVAGEADYLIRVVVADLPT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
LAEFTMKRLMRVPGVESIRSNIVLTALKREGPLPLSHLR
HHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCCCHHCCC
>Mature Secondary Structure
MNHADLDPFDLALLAALQADGRSTHQQLAERVHLSPSQVGRRLARLEADGVITGYRVNLS
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCC
PQALGLGVLVFISVKLAHHGDTIIERFAEEILLLEEVQECYSVAGEADYLIRVVVADLPT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
LAEFTMKRLMRVPGVESIRSNIVLTALKREGPLPLSHLR
HHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]