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The map label for this gene is yfcA [C]

Identifier: 94312445

GI number: 94312445

Start: 3805453

End: 3806211

Strand: Reverse

Name: yfcA [C]

Synonym: Rmet_3514

Alternate gene names: 94312445

Gene position: 3806211-3805453 (Counterclockwise)

Preceding gene: 94312446

Following gene: 94312444

Centisome position: 96.9

GC content: 64.82

Gene sequence:

>759_bases
ATGGAGTTTGTCTTTCTGGCCGCGGCCGCCTTTCTGGCCGGAGTGATCGATGCTGTCGCTGGCGGCGGCGGGCTGGTGCA
GGTACCGGCCCTGTTTTCCACTTATCCCAATATGTCGCCCGCCACGCTGATCGGCACCACCAAGGTGGCGTCGCTGGCGG
GCACCGCCAACGCCGCGACACGCTATGCGCGCAAGGTGCGGATTTACTGGGGCGCCACGGCGCCGGCAATGCTTGCCGCA
TTCGTGATGGCGATGGCCGGGGCCTGGACCCTGACCAAGATTCCGGCTGAGCCGCTACGCAAGGCACTGCCGCTGGTGTT
GCTGGTGCTGCTGATCTACACCGTAGCCAAGAAGAACCTGGGTGCAGAGCACGCGCCAACCCTGACGGGGACGCGTGAGC
GCGTGGCCGCCTTGCTCGCGGGCGCGGTGATTGGCTTCTATGACGGTGCCTTCGGTCCGGGTACCGGCAGCTTCCTGATG
ATCGTTTTCGTACGGGTGTTTGGTTACGACTTCCTGCACGCGTCGGCGTCGGCCAAGGTCGTCAACCTGGCCACCAATCT
TGCGGCGCTGCTGCTGCTGGCATCCAAGGGACATATCTGGTGGCAGCTTGGCCTGATCATGGCCGCGGCAAACGTTGCCG
GCAGCCAGGTGGGCAGCAAGCTTGCGCTGCGCCATGGCAGCGCCTTCGTGCGCAAGGTGTTCATCGCCGTGGTGAGCGCG
CTGATCCTGAAGACGGCCTACGACGCGTTCCTGCGTTGA

Upstream 100 bases:

>100_bases
TTCGTGCGGGGGGCCGAAGGCCTCTGGCGCGGCAACCTCGTACCGACAGCCAAGCATCTGGGCTGACAGGCGCTTCCGAA
CCCTTCCTGATTGTTCATCC

Downstream 100 bases:

>100_bases
GCATGGTGGTCGGCGTGGGGCAACAGGGGAGCAACAACCCTCAACTGTTGCGCTCGCGCGGCTGCGGGTTAATCCCGCTT
TCGCTACAAGATCGCTGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF9 [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MEFVFLAAAAFLAGVIDAVAGGGGLVQVPALFSTYPNMSPATLIGTTKVASLAGTANAATRYARKVRIYWGATAPAMLAA
FVMAMAGAWTLTKIPAEPLRKALPLVLLVLLIYTVAKKNLGAEHAPTLTGTRERVAALLAGAVIGFYDGAFGPGTGSFLM
IVFVRVFGYDFLHASASAKVVNLATNLAALLLLASKGHIWWQLGLIMAAANVAGSQVGSKLALRHGSAFVRKVFIAVVSA
LILKTAYDAFLR

Sequences:

>Translated_252_residues
MEFVFLAAAAFLAGVIDAVAGGGGLVQVPALFSTYPNMSPATLIGTTKVASLAGTANAATRYARKVRIYWGATAPAMLAA
FVMAMAGAWTLTKIPAEPLRKALPLVLLVLLIYTVAKKNLGAEHAPTLTGTRERVAALLAGAVIGFYDGAFGPGTGSFLM
IVFVRVFGYDFLHASASAKVVNLATNLAALLLLASKGHIWWQLGLIMAAANVAGSQVGSKLALRHGSAFVRKVFIAVVSA
LILKTAYDAFLR
>Mature_252_residues
MEFVFLAAAAFLAGVIDAVAGGGGLVQVPALFSTYPNMSPATLIGTTKVASLAGTANAATRYARKVRIYWGATAPAMLAA
FVMAMAGAWTLTKIPAEPLRKALPLVLLVLLIYTVAKKNLGAEHAPTLTGTRERVAALLAGAVIGFYDGAFGPGTGSFLM
IVFVRVFGYDFLHASASAKVVNLATNLAALLLLASKGHIWWQLGLIMAAANVAGSQVGSKLALRHGSAFVRKVFIAVVSA
LILKTAYDAFLR

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=245, Percent_Identity=33.469387755102, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26237; Mature: 26237

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFVFLAAAAFLAGVIDAVAGGGGLVQVPALFSTYPNMSPATLIGTTKVASLAGTANAAT
CHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCHHEEHHHHHHHHHCCHHHHH
RYARKVRIYWGATAPAMLAAFVMAMAGAWTLTKIPAEPLRKALPLVLLVLLIYTVAKKNL
HHHHHEEEEECCCHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
GAEHAPTLTGTRERVAALLAGAVIGFYDGAFGPGTGSFLMIVFVRVFGYDFLHASASAKV
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
VNLATNLAALLLLASKGHIWWQLGLIMAAANVAGSQVGSKLALRHGSAFVRKVFIAVVSA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILKTAYDAFLR
HHHHHHHHHHCC
>Mature Secondary Structure
MEFVFLAAAAFLAGVIDAVAGGGGLVQVPALFSTYPNMSPATLIGTTKVASLAGTANAAT
CHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCHHEEHHHHHHHHHCCHHHHH
RYARKVRIYWGATAPAMLAAFVMAMAGAWTLTKIPAEPLRKALPLVLLVLLIYTVAKKNL
HHHHHEEEEECCCHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
GAEHAPTLTGTRERVAALLAGAVIGFYDGAFGPGTGSFLMIVFVRVFGYDFLHASASAKV
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
VNLATNLAALLLLASKGHIWWQLGLIMAAANVAGSQVGSKLALRHGSAFVRKVFIAVVSA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILKTAYDAFLR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]