Click here to switch to the map view.

The map label for this gene is 94312444

Identifier: 94312444

GI number: 94312444

Start: 3803968

End: 3805116

Strand: Reverse

Name: 94312444

Synonym: Rmet_3513

Alternate gene names: NA

Gene position: 3805116-3803968 (Counterclockwise)

Preceding gene: 94312445

Following gene: 94312443

Centisome position: 96.87

GC content: 63.53

Gene sequence:

>1149_bases
ATGACATTCAAGCGTGCCAGCTTGCTGGCTCTTGCCGCCGCCAGCCTGTTCGCCGGCGCAGCCAACGCCCAGGTGAAGGT
TGGAGTCACGGTATCGGCCACGGGCCCTGCCGCATCGCTCGGCATTCCCGAGAAGAATACGTTCACGCTGCTGCCGAAGG
AGATCGCAGGCAAGAAGATCGAGTACATCGTGCTCGACGACGCCACCGACACGACCACGGCGGTCAAGAACACGCGCAAG
CTGATCAGCGAGGACAAGGTAGACGTGGTGGTGGGCTCCACCGTCACGCCGAACTCGCTGGCGATGGTGGACGTTGCCGC
CGAGAGTGAAACGCCGATGATCTCGATGGCCGCGTCGGCGCGCATTATCGAACCGATGGATGCCAAGCGCGCGTGGATTT
TCAAGACGCCGCAGAACGACTCGCACATGGCCACCGCCATCGCCGAGCACATGACCAACAACAACGTGAAGACGGTGGCG
TTCATCGGCTTCGCGGATGCCTATGGCGATAGCTGGGGTCAGGAGTTCGCCAAGGTCGCCGAGATGCGCAAGATCAAGGT
GGTCGCCAACGAACGGTTTGCGCGCACCGATAACTCTGTGACCGGGCAGGTGCTGAAGATGATGGGCGCCAATCCGGATG
CGGTGCTGATCGCTGGTTCGGGTACGCCGGCCGCGCTGCCGGAGAAGGCGCTCAAGGAGCGCGGCTACAAGGGCAAGATC
TACCAGACGCACGGTGTGGCCAACCCCGACTTCCTGCGCGTGTGCGGCAAGGACTGCGAAGGCACGTTCCTGCCTGCCGG
CCCGCTGCTGGTGGCCGAGCAACTGCCTGACAGCAATCCGGTCAAGAAGCCGGCCCTGACGTACAAGACGGCTTACGAGA
AGGCCTTCGGCGGTCAGGTGTCGACGTTCGGCGGCCATGCCTGGGACGCGGGCCTGCTGCTGCAGAACGCGATTCCTGAA
GCGCTCAAGAAGGGTCAGCCCGGCACGAAGGAGTTCCGCAAGGCGCTGCGCGATGCGCTCGAGAAGACCACGAACCTGCC
GGTGTCGCACGGCATCATCAACATGACCCCCACCGACCACCTCGGCATGGACCAGCGCGCGCGCGTGATGGTGCAGATCG
TCGACGGCAAGTGGAAGCTGCAGAAGTAA

Upstream 100 bases:

>100_bases
CAGAGAGCCCGAACAACGGGCCGCAACAAAAAACTGGAGGCATCCGCCGGCCGGAAGCCGGCGGATGCCTTTTTCCGTTT
TTGGAACCGAAGGAGACGCA

Downstream 100 bases:

>100_bases
GCGGGAGATAAGTCGCGCGGGGTAAGCGTGGTACGGAAGGGCGCATGGAGTTTGCCATGCGCCCTTTTTTTACCTCCGCA
TCCGGGCGGCCACGTTTGAC

Product: ABC transporter periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MTFKRASLLALAAASLFAGAANAQVKVGVTVSATGPAASLGIPEKNTFTLLPKEIAGKKIEYIVLDDATDTTTAVKNTRK
LISEDKVDVVVGSTVTPNSLAMVDVAAESETPMISMAASARIIEPMDAKRAWIFKTPQNDSHMATAIAEHMTNNNVKTVA
FIGFADAYGDSWGQEFAKVAEMRKIKVVANERFARTDNSVTGQVLKMMGANPDAVLIAGSGTPAALPEKALKERGYKGKI
YQTHGVANPDFLRVCGKDCEGTFLPAGPLLVAEQLPDSNPVKKPALTYKTAYEKAFGGQVSTFGGHAWDAGLLLQNAIPE
ALKKGQPGTKEFRKALRDALEKTTNLPVSHGIINMTPTDHLGMDQRARVMVQIVDGKWKLQK

Sequences:

>Translated_382_residues
MTFKRASLLALAAASLFAGAANAQVKVGVTVSATGPAASLGIPEKNTFTLLPKEIAGKKIEYIVLDDATDTTTAVKNTRK
LISEDKVDVVVGSTVTPNSLAMVDVAAESETPMISMAASARIIEPMDAKRAWIFKTPQNDSHMATAIAEHMTNNNVKTVA
FIGFADAYGDSWGQEFAKVAEMRKIKVVANERFARTDNSVTGQVLKMMGANPDAVLIAGSGTPAALPEKALKERGYKGKI
YQTHGVANPDFLRVCGKDCEGTFLPAGPLLVAEQLPDSNPVKKPALTYKTAYEKAFGGQVSTFGGHAWDAGLLLQNAIPE
ALKKGQPGTKEFRKALRDALEKTTNLPVSHGIINMTPTDHLGMDQRARVMVQIVDGKWKLQK
>Mature_381_residues
TFKRASLLALAAASLFAGAANAQVKVGVTVSATGPAASLGIPEKNTFTLLPKEIAGKKIEYIVLDDATDTTTAVKNTRKL
ISEDKVDVVVGSTVTPNSLAMVDVAAESETPMISMAASARIIEPMDAKRAWIFKTPQNDSHMATAIAEHMTNNNVKTVAF
IGFADAYGDSWGQEFAKVAEMRKIKVVANERFARTDNSVTGQVLKMMGANPDAVLIAGSGTPAALPEKALKERGYKGKIY
QTHGVANPDFLRVCGKDCEGTFLPAGPLLVAEQLPDSNPVKKPALTYKTAYEKAFGGQVSTFGGHAWDAGLLLQNAIPEA
LKKGQPGTKEFRKALRDALEKTTNLPVSHGIINMTPTDHLGMDQRARVMVQIVDGKWKLQK

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 40867; Mature: 40736

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFKRASLLALAAASLFAGAANAQVKVGVTVSATGPAASLGIPEKNTFTLLPKEIAGKKI
CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHCCCEE
EYIVLDDATDTTTAVKNTRKLISEDKVDVVVGSTVTPNSLAMVDVAAESETPMISMAASA
EEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCC
RIIEPMDAKRAWIFKTPQNDSHMATAIAEHMTNNNVKTVAFIGFADAYGDSWGQEFAKVA
EEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEEHHHHCCHHHHHHHHHH
EMRKIKVVANERFARTDNSVTGQVLKMMGANPDAVLIAGSGTPAALPEKALKERGYKGKI
HHHEEEEEECCHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCE
YQTHGVANPDFLRVCGKDCEGTFLPAGPLLVAEQLPDSNPVKKPALTYKTAYEKAFGGQV
EEECCCCCCHHHHHCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHCCCE
STFGGHAWDAGLLLQNAIPEALKKGQPGTKEFRKALRDALEKTTNLPVSHGIINMTPTDH
ECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCEEECCCCCC
LGMDQRARVMVQIVDGKWKLQK
CCCCCCCEEEEEEECCEEEECC
>Mature Secondary Structure 
TFKRASLLALAAASLFAGAANAQVKVGVTVSATGPAASLGIPEKNTFTLLPKEIAGKKI
CCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHCCCEE
EYIVLDDATDTTTAVKNTRKLISEDKVDVVVGSTVTPNSLAMVDVAAESETPMISMAASA
EEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCC
RIIEPMDAKRAWIFKTPQNDSHMATAIAEHMTNNNVKTVAFIGFADAYGDSWGQEFAKVA
EEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEEHHHHCCHHHHHHHHHH
EMRKIKVVANERFARTDNSVTGQVLKMMGANPDAVLIAGSGTPAALPEKALKERGYKGKI
HHHEEEEEECCHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCE
YQTHGVANPDFLRVCGKDCEGTFLPAGPLLVAEQLPDSNPVKKPALTYKTAYEKAFGGQV
EEECCCCCCHHHHHCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHCCCE
STFGGHAWDAGLLLQNAIPEALKKGQPGTKEFRKALRDALEKTTNLPVSHGIINMTPTDH
ECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCEEECCCCCC
LGMDQRARVMVQIVDGKWKLQK
CCCCCCCEEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]