Click here to switch to the map view.

The map label for this gene is bug [H]

Identifier: 94312439

GI number: 94312439

Start: 3797971

End: 3798933

Strand: Reverse

Name: bug [H]

Synonym: Rmet_3508

Alternate gene names: 94312439

Gene position: 3798933-3797971 (Counterclockwise)

Preceding gene: 94312441

Following gene: 94312438

Centisome position: 96.71

GC content: 64.69

Gene sequence:

>963_bases
GTGTCCGCTGCAGTGGGTACGCTCGCCACGGTTGGTTTGACGGCGTCGGCTTTCGCGCAATCCAACTATCCAAACAAGCC
GATCCGCCTGGTTGTGCCATTCGCCGCGGGTGGCTCGACGGATCTGTCGGCGCGCCTGGTAGCGGAGTTCGCAGGGCGTG
AGCTGGGGCAGACCATCGTCGTCGACAACAAGGGCGGGGCGGGTGGTTCGATCGGCATGGAGCAGGTGGCTCGTGCCACG
CCGGACGGCTACACGATCGGCATGGCCACGGTCAGCACGCACGGGTCCAACCCGGCGGTCTATCCGAAGCTCGGCTATGA
CCCGATCAAGGACTTCGCCCCGGTGACCAACGTGGTAGCGATTCCGAGTGTGTTCGCCGTGCATCCGAGCGTGCCCGCCA
AGACGATGCAGGAGTTCATCGCCCTGGCGAAGGCGCACCCGGGCAAGTACACGTTCGCATCGCCGGGCGCGGGGTCGCTG
GGTCACGTGAACATCGAGAACTTCATGATGCTGGCCAAGATCGATCTGCTGCATGTGCCGTACAAGGGCGCGGGTCTGGC
GCTCAACGATGCGGTGGCGGGGCAGGTCAATGCGATCACGGACAACCTGTCGTCGACGCTGCCCCACGTGAAAGCGGGCC
GACTGCGTGCGCTGGCGGTGCTCGGCACGCAGCGTTCGGCACAGTTGCCCAATGTGCCGACCTATGCCGAACTCGGTTTC
AAGGACATGGGCGAGGGCGGCTGGTTCGGCATCGTTGCGCCCGCCGGCACGCCCCAGCCGGTGATCGACAAGCTGAATGC
CGCGATCCACAAGGCCATGCAGAACCCCGAATTCAAGCGGAAGGTGGAGGAGTCGGGTGGCACGCTGGTGCCGACGACGC
CTGATCAGTTCAAGGCACAGATCCAGCAATCGATCGCCCGCTACGCGCGTGTGGTCAAGGCCGCCAACATCAAGCTGGAC
TAA

Upstream 100 bases:

>100_bases
TCGGTACCCCGAAATTCGAGAACGAGAAGAGGAGTTTGATCAGATGACCCGAGTCCGCAATGCTGCCAGCACGCGCCGGC
ATTTCCTGCTTTCCACCGCC

Downstream 100 bases:

>100_bases
GCCATGACGACGTTTGAAGCAGTGCGGGGCGACGCGCCGGTGGGGCCGTTCCTCTTGTTTGCGCCCGAAGGCACGGCGTT
GCCGCTGGTCTGTGACTCGC

Product: extra-cytoplasmic solute receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSAAVGTLATVGLTASAFAQSNYPNKPIRLVVPFAAGGSTDLSARLVAEFAGRELGQTIVVDNKGGAGGSIGMEQVARAT
PDGYTIGMATVSTHGSNPAVYPKLGYDPIKDFAPVTNVVAIPSVFAVHPSVPAKTMQEFIALAKAHPGKYTFASPGAGSL
GHVNIENFMMLAKIDLLHVPYKGAGLALNDAVAGQVNAITDNLSSTLPHVKAGRLRALAVLGTQRSAQLPNVPTYAELGF
KDMGEGGWFGIVAPAGTPQPVIDKLNAAIHKAMQNPEFKRKVEESGGTLVPTTPDQFKAQIQQSIARYARVVKAANIKLD

Sequences:

>Translated_320_residues
MSAAVGTLATVGLTASAFAQSNYPNKPIRLVVPFAAGGSTDLSARLVAEFAGRELGQTIVVDNKGGAGGSIGMEQVARAT
PDGYTIGMATVSTHGSNPAVYPKLGYDPIKDFAPVTNVVAIPSVFAVHPSVPAKTMQEFIALAKAHPGKYTFASPGAGSL
GHVNIENFMMLAKIDLLHVPYKGAGLALNDAVAGQVNAITDNLSSTLPHVKAGRLRALAVLGTQRSAQLPNVPTYAELGF
KDMGEGGWFGIVAPAGTPQPVIDKLNAAIHKAMQNPEFKRKVEESGGTLVPTTPDQFKAQIQQSIARYARVVKAANIKLD
>Mature_319_residues
SAAVGTLATVGLTASAFAQSNYPNKPIRLVVPFAAGGSTDLSARLVAEFAGRELGQTIVVDNKGGAGGSIGMEQVARATP
DGYTIGMATVSTHGSNPAVYPKLGYDPIKDFAPVTNVVAIPSVFAVHPSVPAKTMQEFIALAKAHPGKYTFASPGAGSLG
HVNIENFMMLAKIDLLHVPYKGAGLALNDAVAGQVNAITDNLSSTLPHVKAGRLRALAVLGTQRSAQLPNVPTYAELGFK
DMGEGGWFGIVAPAGTPQPVIDKLNAAIHKAMQNPEFKRKVEESGGTLVPTTPDQFKAQIQQSIARYARVVKAANIKLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33323; Mature: 33191

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAVGTLATVGLTASAFAQSNYPNKPIRLVVPFAAGGSTDLSARLVAEFAGRELGQTIV
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEE
VDNKGGAGGSIGMEQVARATPDGYTIGMATVSTHGSNPAVYPKLGYDPIKDFAPVTNVVA
EECCCCCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHH
IPSVFAVHPSVPAKTMQEFIALAKAHPGKYTFASPGAGSLGHVNIENFMMLAKIDLLHVP
HCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEHHHEEEEEEEEEEECC
YKGAGLALNDAVAGQVNAITDNLSSTLPHVKAGRLRALAVLGTQRSAQLPNVPTYAELGF
CCCCCEEECCHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCC
KDMGEGGWFGIVAPAGTPQPVIDKLNAAIHKAMQNPEFKRKVEESGGTLVPTTPDQFKAQ
HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCHHHHHH
IQQSIARYARVVKAANIKLD
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SAAVGTLATVGLTASAFAQSNYPNKPIRLVVPFAAGGSTDLSARLVAEFAGRELGQTIV
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEE
VDNKGGAGGSIGMEQVARATPDGYTIGMATVSTHGSNPAVYPKLGYDPIKDFAPVTNVVA
EECCCCCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHH
IPSVFAVHPSVPAKTMQEFIALAKAHPGKYTFASPGAGSLGHVNIENFMMLAKIDLLHVP
HCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEHHHEEEEEEEEEEECC
YKGAGLALNDAVAGQVNAITDNLSSTLPHVKAGRLRALAVLGTQRSAQLPNVPTYAELGF
CCCCCEEECCHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCC
KDMGEGGWFGIVAPAGTPQPVIDKLNAAIHKAMQNPEFKRKVEESGGTLVPTTPDQFKAQ
HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCHHHHHH
IQQSIARYARVVKAANIKLD
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11111902; 12910271; 2873570 [H]