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The map label for this gene is soxY

Identifier: 94312354

GI number: 94312354

Start: 3702656

End: 3703111

Strand: Reverse

Name: soxY

Synonym: Rmet_3423

Alternate gene names: NA

Gene position: 3703111-3702656 (Counterclockwise)

Preceding gene: 94312355

Following gene: 94312353

Centisome position: 94.27

GC content: 65.13

Gene sequence:

>456_bases
ATGAATGCGAAACGACGAGACGTGCTACGGATGACCGCTGTGCTGTCGCTGATGGCCGCCACCGGCCTGATCAGCGAGGC
GCAGGCCGCGGAGTGGAACAAGACGGCCTTCGACGGCAAGAGCGTGGCCGACGTGATCAAGGCGCTGGGCGGCAGCGGTA
CCGAGAAGAGCTCGGCCATCACCTTCATCGCACCTGACATCGCCGAGAACGGTGCCGTGGTGCCGGTGGCCGTGACCAGC
AACATCCCCGATACCGAGCAGATCGCTATCCTGGTGGAAAAGAACCCGAACACGCTGGCCGCCGATTTCACGATTCCGGC
CGGCACCGAGCCGTTCGTCTCCACGCGCGTGAAGATGGGCCAGACCTCGGTCGTCCACGCCGCGGTCAAGGCCGGCGGCA
AGTGGTACGTGGCATCGAAGGAAATCAAGGTCACGCTGGGCGGCTGCGGCGGCTGA

Upstream 100 bases:

>100_bases
CAGCCACGCGGCTGCAGACAGTGGAGCGAGCGCCAGAATCATTTTGAAACGGCTTCCAGGGAAACCGGGTAAGCAAGGCA
AGTACAGGAAATACAGCAAC

Downstream 100 bases:

>100_bases
CGCCCCATCGTTCAGACGAGAACACGGACCAGATTTCCAGATTACTGCTGACAGGAGAAGCACATGGCAGACCCGATGCG
CGTTCGCGCCACCGAAAACG

Product: sulfur oxidation protein SoxY

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; Sulfur Oxidation Protein; Tat Pathway Signal Sequence Domain Protein; Sulfur Oxidation Protein SoxY-Like Protein; Sulfur Oxidation Protein SoxY-Like; Sulfur Oxidation Protein SoxY; Secreted Protein-Like Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Sulfur Oxidation Protein SoxY Domain-Containing Protein; Sulphur Oxidation Protein; Sulfur Compound-Chelating Protein SoxY; Secreted Protein

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNAKRRDVLRMTAVLSLMAATGLISEAQAAEWNKTAFDGKSVADVIKALGGSGTEKSSAITFIAPDIAENGAVVPVAVTS
NIPDTEQIAILVEKNPNTLAADFTIPAGTEPFVSTRVKMGQTSVVHAAVKAGGKWYVASKEIKVTLGGCGG

Sequences:

>Translated_151_residues
MNAKRRDVLRMTAVLSLMAATGLISEAQAAEWNKTAFDGKSVADVIKALGGSGTEKSSAITFIAPDIAENGAVVPVAVTS
NIPDTEQIAILVEKNPNTLAADFTIPAGTEPFVSTRVKMGQTSVVHAAVKAGGKWYVASKEIKVTLGGCGG
>Mature_151_residues
MNAKRRDVLRMTAVLSLMAATGLISEAQAAEWNKTAFDGKSVADVIKALGGSGTEKSSAITFIAPDIAENGAVVPVAVTS
NIPDTEQIAILVEKNPNTLAADFTIPAGTEPFVSTRVKMGQTSVVHAAVKAGGKWYVASKEIKVTLGGCGG

Specific function: Unknown

COG id: COG5501

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15559; Mature: 15559

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKRRDVLRMTAVLSLMAATGLISEAQAAEWNKTAFDGKSVADVIKALGGSGTEKSSAI
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEE
TFIAPDIAENGAVVPVAVTSNIPDTEQIAILVEKNPNTLAADFTIPAGTEPFVSTRVKMG
EEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHCCC
QTSVVHAAVKAGGKWYVASKEIKVTLGGCGG
CHHHHHHHHHCCCEEEEECCEEEEEEECCCC
>Mature Secondary Structure
MNAKRRDVLRMTAVLSLMAATGLISEAQAAEWNKTAFDGKSVADVIKALGGSGTEKSSAI
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEE
TFIAPDIAENGAVVPVAVTSNIPDTEQIAILVEKNPNTLAADFTIPAGTEPFVSTRVKMG
EEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHCCC
QTSVVHAAVKAGGKWYVASKEIKVTLGGCGG
CHHHHHHHHHCCCEEEEECCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA