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The map label for this gene is cyt [H]

Identifier: 94312355

GI number: 94312355

Start: 3703366

End: 3703692

Strand: Reverse

Name: cyt [H]

Synonym: Rmet_3424

Alternate gene names: 94312355

Gene position: 3703692-3703366 (Counterclockwise)

Preceding gene: 94312356

Following gene: 94312354

Centisome position: 94.29

GC content: 66.36

Gene sequence:

>327_bases
ATGAAGCAGTTTGTCATCGCCGCCGCTCTCCTGGCCGCCGCCGCATCCGCGCACGCCGTGGATGCCGCCAAGGCCCAGGA
AATCGCCAACAAGAACGCCTGCATGGGCTGCCACCAGGTCGACAAGAAGCTGGTCGGCCCGGCGTACAAGGACGTGGCAG
CCAAGTACAAGGGCGACAAGACCGCCCTGGCGAAGCTGACCGCGAAGGTCAAGAACGGTGGTTCGGGCGTCTGGGGTCCG
GTGCCGATGCCGGCTAACGCCGCTGTCAGCGATGCCGACCTGAAGACGGTCGTGGAGTGGGTGCTGGCTGGCGCCCCGGC
CAAGTAA

Upstream 100 bases:

>100_bases
GGCCCGCCCAACGGCGGCCAGCGCGTGCCGCGCCGCGGGATCGCCCCCCCAAGCGCGTCCTTGCCGTCCCCACGGCTCAA
TCAGTTTGGAGCACAACAAC

Downstream 100 bases:

>100_bases
GCGCCGCGACGTCCGCGCGGGCCGTCCGATGTTCCGGCGGCCCGTGCCATTTCTGGCGGTAGGACATCCATCGTGATGAC
CGGCGAAATACCAAAGCAAT

Product: cytochrome c551/c552 h16_A3570

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKQFVIAAALLAAAASAHAVDAAKAQEIANKNACMGCHQVDKKLVGPAYKDVAAKYKGDKTALAKLTAKVKNGGSGVWGP
VPMPANAAVSDADLKTVVEWVLAGAPAK

Sequences:

>Translated_108_residues
MKQFVIAAALLAAAASAHAVDAAKAQEIANKNACMGCHQVDKKLVGPAYKDVAAKYKGDKTALAKLTAKVKNGGSGVWGP
VPMPANAAVSDADLKTVVEWVLAGAPAK
>Mature_108_residues
MKQFVIAAALLAAAASAHAVDAAKAQEIANKNACMGCHQVDKKLVGPAYKDVAAKYKGDKTALAKLTAKVKNGGSGVWGP
VPMPANAAVSDADLKTVVEWVLAGAPAK

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 10956; Mature: 10956

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS00165 DEHYDRATASE_SER_THR ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFVIAAALLAAAASAHAVDAAKAQEIANKNACMGCHQVDKKLVGPAYKDVAAKYKGDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCHHHHHHHHHCCCCH
TALAKLTAKVKNGGSGVWGPVPMPANAAVSDADLKTVVEWVLAGAPAK
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKQFVIAAALLAAAASAHAVDAAKAQEIANKNACMGCHQVDKKLVGPAYKDVAAKYKGDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCHHHHHHHHHCCCCH
TALAKLTAKVKNGGSGVWGPVPMPANAAVSDADLKTVVEWVLAGAPAK
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]