Click here to switch to the map view.

The map label for this gene is gspC

Identifier: 94312312

GI number: 94312312

Start: 3656362

End: 3656976

Strand: Reverse

Name: gspC

Synonym: Rmet_3381

Alternate gene names: NA

Gene position: 3656976-3656362 (Counterclockwise)

Preceding gene: 94312313

Following gene: 94312311

Centisome position: 93.1

GC content: 69.27

Gene sequence:

>615_bases
ATGCCTCGCCTGGCTGGCCTGGCGCTGTTTGTCGCGCTGTGCGCGCTGGTGACCCATTGGGTCCTGGTATTCAGTGCGAT
GCGGACGATCCCCGTACCAACTTCCGCGCGTATCGCCCAGACCGAGCCAGTCGAGACCGGAGCAGTGGCGACGCTATTCG
GCGGCAGCGCTCAGTCAGGCGTTCGCGATGTGCAACTGATCGGCGTCGTGGCGGATCTGGATGGCGTAGGCCCTGCGGCG
GCAATTCTGTCGCTCGACGGCGGGCCGCCCAAGGCCGTGCGCGTCGGCGCATCGCTGTCTGCGCAGATTCGTTTGACGGA
AATCCACGGCCGCAACATCGTGATCGAACGCAACGGCGTGCGTCAGGAGATTGCATTGCCGGTGCAGAACACGCCGACAG
CGGGTCGGCCGGGCAACCTTGGCGCGGCGCCGCCGGCCGGTGCCGGTGCACCGCTATCGACACCGATGCCGGCCCCGGCC
GCCCCGCCGCCGGTGGTCAACGCGCCGGCCCAGCCACAGGAGTTCACCGCATCCCCGGCGCAGCCGGTGCCACCGCCGCC
TCAACATGCGCCTGCGCAAGGCCCGGTTGGCGAGAGCCTGGGCGCGAAGGACTAA

Upstream 100 bases:

>100_bases
CTGGTACGCTAGGCGGTCTCCCTATTCGAGCCGCCCGGCGTATCGATCTGTGTCAACCCTGCTTCGGCCTGCCCTCCGTT
TCGACCCGTCCGCCGCCTGG

Downstream 100 bases:

>100_bases
GCTTGTCGGATGCCCCCACGTTTCAGAATATTGCGCAGTGTTTGAGTATCTTGCGTCTGTTTACGGCACTCGTCTGTTCT
GTGAGCCCCGTAACATCGTA

Product: general secretion pathway related transmembrane protein

Products: NA

Alternate protein names: General Secretion Pathway Protein C; General Secretion Pathway Related Transmembrane Protein

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MPRLAGLALFVALCALVTHWVLVFSAMRTIPVPTSARIAQTEPVETGAVATLFGGSAQSGVRDVQLIGVVADLDGVGPAA
AILSLDGGPPKAVRVGASLSAQIRLTEIHGRNIVIERNGVRQEIALPVQNTPTAGRPGNLGAAPPAGAGAPLSTPMPAPA
APPPVVNAPAQPQEFTASPAQPVPPPPQHAPAQGPVGESLGAKD

Sequences:

>Translated_204_residues
MPRLAGLALFVALCALVTHWVLVFSAMRTIPVPTSARIAQTEPVETGAVATLFGGSAQSGVRDVQLIGVVADLDGVGPAA
AILSLDGGPPKAVRVGASLSAQIRLTEIHGRNIVIERNGVRQEIALPVQNTPTAGRPGNLGAAPPAGAGAPLSTPMPAPA
APPPVVNAPAQPQEFTASPAQPVPPPPQHAPAQGPVGESLGAKD
>Mature_203_residues
PRLAGLALFVALCALVTHWVLVFSAMRTIPVPTSARIAQTEPVETGAVATLFGGSAQSGVRDVQLIGVVADLDGVGPAAA
ILSLDGGPPKAVRVGASLSAQIRLTEIHGRNIVIERNGVRQEIALPVQNTPTAGRPGNLGAAPPAGAGAPLSTPMPAPAA
PPPVVNAPAQPQEFTASPAQPVPPPPQHAPAQGPVGESLGAKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20417; Mature: 20286

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLAGLALFVALCALVTHWVLVFSAMRTIPVPTSARIAQTEPVETGAVATLFGGSAQSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
VRDVQLIGVVADLDGVGPAAAILSLDGGPPKAVRVGASLSAQIRLTEIHGRNIVIERNGV
CCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEECCCEEEEECCCC
RQEIALPVQNTPTAGRPGNLGAAPPAGAGAPLSTPMPAPAAPPPVVNAPAQPQEFTASPA
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
QPVPPPPQHAPAQGPVGESLGAKD
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRLAGLALFVALCALVTHWVLVFSAMRTIPVPTSARIAQTEPVETGAVATLFGGSAQSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
VRDVQLIGVVADLDGVGPAAAILSLDGGPPKAVRVGASLSAQIRLTEIHGRNIVIERNGV
CCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEECCCEEEEECCCC
RQEIALPVQNTPTAGRPGNLGAAPPAGAGAPLSTPMPAPAAPPPVVNAPAQPQEFTASPA
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
QPVPPPPQHAPAQGPVGESLGAKD
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA