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The map label for this gene is ybgI [C]

Identifier: 94312163

GI number: 94312163

Start: 3507869

End: 3508615

Strand: Reverse

Name: ybgI [C]

Synonym: Rmet_3232

Alternate gene names: 94312163

Gene position: 3508615-3507869 (Counterclockwise)

Preceding gene: 94312165

Following gene: 94312161

Centisome position: 89.32

GC content: 63.32

Gene sequence:

>747_bases
ATGAAAACAAAAGAGCTTGAATTGTACTTGAACGACCTGCTGCAGGTTTCCCGTTTCAAGGACTATTGCCCGAATGGACT
CCAGGTGCAGGGTCGGCCGGAGGTTGCCCATATTGTCACCGGTGTGACGGCGAGCTTGGCGCTGATCGATGCGGCGATCG
AAGCCGGCGCGGACGCCATCCTCGTGCACCACGGCTATTTCTGGAAAAATGAGGACGCCTGTATCGTTGGCCAGAAACAC
GCCCGCCTGAAGCGCCTGCTGGGCGCCGATATCAATCTGCTGGCGTACCATCTGCCGCTAGACAGCCATCCTGAGCTTGG
CAACAACGCCCAACTGGGTCTGCAGCTCGGGATCACCCCGACGGGCCGCTTCAGCGATGATCAGTTGGGCTGGACCGGCA
CGCTGCCGCAGCCCATGCCGCTCAGCGCCTTTGCGGCCCATGTGGGTGGCGTGCTGGAGCGGGAGCCGCTGGTCATCGGC
GACGCCGACCAGATGATCCGCACTGTGGGCTGGTGTACCGGCGGCGCGCAGGGGTACTTCGCGGCCGCGGTGGACGCGGG
CGTGGATCTTTATATGAGTGGGGAGGTGTCCGAGCCCACCACGCACCTGGCGCGGGAGAGCGGCGTGGCCTATCTGGCTG
CCGGTCATCATGCGACGGAACGCTACGGCATCCGTGCAGTGGGCGAACATCTGGCGCAGCGCTTCGGGCTGCGTCACACT
TTCATCGACATTCCGAACCCGGTCTGA

Upstream 100 bases:

>100_bases
TTGAGTGTGGCCACGACGAACCACACGGCCAGAACAACCGTGACAGCCTGAGCGAAGAACAGCCAGAAGCGGCGCAACAT
ATTGGATTTTTGAGCAGAAA

Downstream 100 bases:

>100_bases
GCCGGGCCGCAATCATCAGCTGCGCGGGGCTTTCAGGCTGTCGCGAATTTCGCGGAGCAGAACAATATCTTCCGGCGTGA
CGGCCGGCGCGGCAGGCTCT

Product: putative metal-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKTKELELYLNDLLQVSRFKDYCPNGLQVQGRPEVAHIVTGVTASLALIDAAIEAGADAILVHHGYFWKNEDACIVGQKH
ARLKRLLGADINLLAYHLPLDSHPELGNNAQLGLQLGITPTGRFSDDQLGWTGTLPQPMPLSAFAAHVGGVLEREPLVIG
DADQMIRTVGWCTGGAQGYFAAAVDAGVDLYMSGEVSEPTTHLARESGVAYLAAGHHATERYGIRAVGEHLAQRFGLRHT
FIDIPNPV

Sequences:

>Translated_248_residues
MKTKELELYLNDLLQVSRFKDYCPNGLQVQGRPEVAHIVTGVTASLALIDAAIEAGADAILVHHGYFWKNEDACIVGQKH
ARLKRLLGADINLLAYHLPLDSHPELGNNAQLGLQLGITPTGRFSDDQLGWTGTLPQPMPLSAFAAHVGGVLEREPLVIG
DADQMIRTVGWCTGGAQGYFAAAVDAGVDLYMSGEVSEPTTHLARESGVAYLAAGHHATERYGIRAVGEHLAQRFGLRHT
FIDIPNPV
>Mature_248_residues
MKTKELELYLNDLLQVSRFKDYCPNGLQVQGRPEVAHIVTGVTASLALIDAAIEAGADAILVHHGYFWKNEDACIVGQKH
ARLKRLLGADINLLAYHLPLDSHPELGNNAQLGLQLGITPTGRFSDDQLGWTGTLPQPMPLSAFAAHVGGVLEREPLVIG
DADQMIRTVGWCTGGAQGYFAAAVDAGVDLYMSGEVSEPTTHLARESGVAYLAAGHHATERYGIRAVGEHLAQRFGLRHT
FIDIPNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=248, Percent_Identity=53.2258064516129, Blast_Score=249, Evalue=9e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 26750; Mature: 26750

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKELELYLNDLLQVSRFKDYCPNGLQVQGRPEVAHIVTGVTASLALIDAAIEAGADAI
CCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGYFWKNEDACIVGQKHARLKRLLGADINLLAYHLPLDSHPELGNNAQLGLQLGITP
EEECCEEEECCCEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCC
TGRFSDDQLGWTGTLPQPMPLSAFAAHVGGVLEREPLVIGDADQMIRTVGWCTGGAQGYF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCCCCCCEE
AAAVDAGVDLYMSGEVSEPTTHLARESGVAYLAAGHHATERYGIRAVGEHLAQRFGLRHT
EEEECCCEEEEECCCCCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEE
FIDIPNPV
EEECCCCC
>Mature Secondary Structure
MKTKELELYLNDLLQVSRFKDYCPNGLQVQGRPEVAHIVTGVTASLALIDAAIEAGADAI
CCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGYFWKNEDACIVGQKHARLKRLLGADINLLAYHLPLDSHPELGNNAQLGLQLGITP
EEECCEEEECCCEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCC
TGRFSDDQLGWTGTLPQPMPLSAFAAHVGGVLEREPLVIGDADQMIRTVGWCTGGAQGYF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCCCCCCEE
AAAVDAGVDLYMSGEVSEPTTHLARESGVAYLAAGHHATERYGIRAVGEHLAQRFGLRHT
EEEECCCEEEEECCCCCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEE
FIDIPNPV
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]