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The map label for this gene is dppC [H]

Identifier: 94312087

GI number: 94312087

Start: 3420042

End: 3420971

Strand: Reverse

Name: dppC [H]

Synonym: Rmet_3156

Alternate gene names: 94312087

Gene position: 3420971-3420042 (Counterclockwise)

Preceding gene: 94312088

Following gene: 94312086

Centisome position: 87.09

GC content: 66.02

Gene sequence:

>930_bases
ATGAGTACTTCGACCGTACCGCAAAACGCGGCCAAGGCGGCCGGTACCGCCAAAGAGCAGACGCCGTTCCGCCGCTTCGC
CAGGCAGTTCATGGAAAGCAAGCTCGCGATGATGGGGCTGGTCATCCTTGGGCTGATCATCCTGATCGCGATATTCGCGC
CGTGGCTCGCGCCACAGAATCCCTATGACCTCGCGACCCTGGACGTGCTCGACGCCCGCCTGGCCCCCGGCGAGCAGGCG
GGCAGTGGCATGACGTTCCTGCTGGGCTCCGACGAACAGGGCCGCGACATGCTTTCCGCGGTGATGTACGGCCTGCGCAT
CAGCGTGGGCGTCGGGGTGGTCAGCACCGTGATCGCGTTGCTGCTGGGCGCCACGCTCGGCCTGCTGGCGGGCTTCATCG
GCGGCCGCACCGAGGCTTTCATCATGCGCGTGGCCGACCTGCAGCTTTCGTTTCCGCCGATCCTGCTGGCGCTGATCCTG
CTGGCGTTCCTGCGTCCCGGCATCGGCAACATCGTCATCGCGCTGGTGGCCGTGCAGTGGGCCTACTACGCGCGCACCAC
GCGTAGCGCGGCGCTGGTCGAGCGGCGCAAGGAATATATCGAGGCGGCCACCTGCCTGGGCCTGCCGCCGGGGCGCATCA
TGTTCCGCCACCTGCTGCCGAACTGCCTGCCGCCGCTGATCGTCATCGCCGCGCTGCAAGTGGCGTCGGCCATCACGCTG
GAAGCCACGCTGTCGTTCCTGGGGCTCGGTGTGCCGGTTACCGAGCCGTCGCTTGGGATGCTGATTGCCAATGGCCAGCA
GTACATGCTGTCCGGCAAGTACTGGATCAGCTTCTTCCCGGGCATCGCCCTCGTGATCACGATCGTGGCGATGAACCTCG
TGGCCGACCAGTTGCGCGATGTGCTCAATCCGCGCCTGCAAACGCAATAA

Upstream 100 bases:

>100_bases
GGTGATCGTGACGTTGTTCATCCTGATCAACCTGCTGGTCGACATCATCTACAGCATGCTCGATCCGCGCGTGCGGATTG
CCGACAACAAGGGCTGAGCC

Downstream 100 bases:

>100_bases
CGGACCAGGAGCCGACATGACGCAACCAACCCTGGTCGTCGAACATCTGAAAACGCAGTTCTTTACCCGAGCCGGCGTGG
CGCGCGCCGTGGACGACGTG

Product: dipeptide ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSTSTVPQNAAKAAGTAKEQTPFRRFARQFMESKLAMMGLVILGLIILIAIFAPWLAPQNPYDLATLDVLDARLAPGEQA
GSGMTFLLGSDEQGRDMLSAVMYGLRISVGVGVVSTVIALLLGATLGLLAGFIGGRTEAFIMRVADLQLSFPPILLALIL
LAFLRPGIGNIVIALVAVQWAYYARTTRSAALVERRKEYIEAATCLGLPPGRIMFRHLLPNCLPPLIVIAALQVASAITL
EATLSFLGLGVPVTEPSLGMLIANGQQYMLSGKYWISFFPGIALVITIVAMNLVADQLRDVLNPRLQTQ

Sequences:

>Translated_309_residues
MSTSTVPQNAAKAAGTAKEQTPFRRFARQFMESKLAMMGLVILGLIILIAIFAPWLAPQNPYDLATLDVLDARLAPGEQA
GSGMTFLLGSDEQGRDMLSAVMYGLRISVGVGVVSTVIALLLGATLGLLAGFIGGRTEAFIMRVADLQLSFPPILLALIL
LAFLRPGIGNIVIALVAVQWAYYARTTRSAALVERRKEYIEAATCLGLPPGRIMFRHLLPNCLPPLIVIAALQVASAITL
EATLSFLGLGVPVTEPSLGMLIANGQQYMLSGKYWISFFPGIALVITIVAMNLVADQLRDVLNPRLQTQ
>Mature_308_residues
STSTVPQNAAKAAGTAKEQTPFRRFARQFMESKLAMMGLVILGLIILIAIFAPWLAPQNPYDLATLDVLDARLAPGEQAG
SGMTFLLGSDEQGRDMLSAVMYGLRISVGVGVVSTVIALLLGATLGLLAGFIGGRTEAFIMRVADLQLSFPPILLALILL
AFLRPGIGNIVIALVAVQWAYYARTTRSAALVERRKEYIEAATCLGLPPGRIMFRHLLPNCLPPLIVIAALQVASAITLE
ATLSFLGLGVPVTEPSLGMLIANGQQYMLSGKYWISFFPGIALVITIVAMNLVADQLRDVLNPRLQTQ

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=290, Percent_Identity=38.6206896551724, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1789964, Length=288, Percent_Identity=43.4027777777778, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1787054, Length=299, Percent_Identity=32.7759197324415, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1789889, Length=249, Percent_Identity=36.144578313253, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1787498, Length=278, Percent_Identity=37.410071942446, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1788505, Length=218, Percent_Identity=28.8990825688073, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1787549, Length=286, Percent_Identity=29.020979020979, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33121; Mature: 32990

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSTVPQNAAKAAGTAKEQTPFRRFARQFMESKLAMMGLVILGLIILIAIFAPWLAPQN
CCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PYDLATLDVLDARLAPGEQAGSGMTFLLGSDEQGRDMLSAVMYGLRISVGVGVVSTVIAL
CCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGATLGLLAGFIGGRTEAFIMRVADLQLSFPPILLALILLAFLRPGIGNIVIALVAVQW
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AYYARTTRSAALVERRKEYIEAATCLGLPPGRIMFRHLLPNCLPPLIVIAALQVASAITL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EATLSFLGLGVPVTEPSLGMLIANGQQYMLSGKYWISFFPGIALVITIVAMNLVADQLRD
HHHHHHHHCCCCCCCCCCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLNPRLQTQ
HHCCCCCCC
>Mature Secondary Structure 
STSTVPQNAAKAAGTAKEQTPFRRFARQFMESKLAMMGLVILGLIILIAIFAPWLAPQN
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PYDLATLDVLDARLAPGEQAGSGMTFLLGSDEQGRDMLSAVMYGLRISVGVGVVSTVIAL
CCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGATLGLLAGFIGGRTEAFIMRVADLQLSFPPILLALILLAFLRPGIGNIVIALVAVQW
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AYYARTTRSAALVERRKEYIEAATCLGLPPGRIMFRHLLPNCLPPLIVIAALQVASAITL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EATLSFLGLGVPVTEPSLGMLIANGQQYMLSGKYWISFFPGIALVITIVAMNLVADQLRD
HHHHHHHHCCCCCCCCCCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLNPRLQTQ
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]