| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94312081
Identifier: 94312081
GI number: 94312081
Start: 3413131
End: 3414288
Strand: Reverse
Name: 94312081
Synonym: Rmet_3150
Alternate gene names: NA
Gene position: 3414288-3413131 (Counterclockwise)
Preceding gene: 94312082
Following gene: 94312080
Centisome position: 86.92
GC content: 66.15
Gene sequence:
>1158_bases ATGATCCGCTGGCCGGCCCGCCGGCGCCTGGCGAGTGCCCTGGCGGTGCTCGGCGCGGCGTTGCTGGTGGCCGGCTGCGA CACACTCGGCTATTACTATCAGTCGATCGGCGGCCATCTTGGCGTGATGGCGCAGGCACAGCCGATCGACGATGCCATTG CCACGGCCAATGGCGCCCACGATGCGCGCCTGGCCCAGCGTCTGACGCTGGCCCGCGAGATCCGTGACTACGCCTCGCGC GAGTTGAAGCTGCCTGACAACGGCAGCTATCGCCGCTACGCCAACCTGCATCGTCCCTATGTGGTGTGGAGCGTGTTCGC CACGCCCGAGCTGTCGATGGATCTGCGCAAGTGGTGCTTTCCGATCGTCGGTTGCATCACCTATCGGGGCTACTACGACC AGAAAGCTGCCGACCACTACGCGCTGGGGCTGCGCCGTGACGGGCTGGAGGCCTATGTGGCCGGCATCCCCGCGTATTCC ACGCTTGGCTACTTCGACGACCCGCTGCTCAACACCTTCGTCTACCTGCCCGAAGGCGAACTGGCGCGGCTGATCTTCCA CGAACTGGCGCATCAGGTGGTTTACGTGCGCAACGACACGGCGTTCAACGAGTCGTTTGCCACGGCGGTGGAGACGGCCG GCGTCGAGCGCTGGCTCGCGCAGGAAGGATCGCCCGAGGTGCGCGCCAGCTATCAGATCTACGACAAGCGGCGGCGCCAG TTCCGCACCATGCTGCTGGGCGCGCGCGACCAACTGGTCGAGCTTTACCATTCGCCGCTCGACGACGACGCCAAGCGGCA AGGCAAAGCGCGTATCTTCGACGAACTGCGCCAGACGTATGCGAACCTCAAGAAGGACGAGTGGGGCGGCTACAGCGGCT ACGACCGATGGTTCGAGCAGCCGCTGACCAATGCCCATCTGGCCGCTGTCGCCACGTATCAGCAATGGGTGCCGGCTTTT ACCGCGTTGCTGGCGCAATGCGACGGTGACTGGGACCGCTTCTACGCGGCCGCGCGCAAGATCGGCGATCTCCCGCCGGC AGAGCGCGACGCGGCCTTGCGCAAGCTGGCGCCGCCCGCCACCGAGGTGAAGCCACTGACCGCCTTGCGTGCGACGGACG CCGGCAGTCAGACATCCGCTACCAGTCAGGGGCAGTAG
Upstream 100 bases:
>100_bases ACGAACTGACCAGCCAGCGATTGACGGACCTGGGGCGCGCGCCGGTGTTCTACGATTGCCTGGTCGAAGTGGAGCCGGTG CCCGCGGAGGCGCTGGCATC
Downstream 100 bases:
>100_bases CCACCGAGGTCAATCGCGGGAGTTTCCCAATGGTGGTGCGCACGGGCCGTGCGAGAATGGCCGACATGCCTCGCGCCCTC AAAAGAACCGGCCATACGCC
Product: putative zinc protease protein
Products: NA
Alternate protein names: Aminopeptidase; Aminopeptidase-Like Protein; Lipoprotein
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MIRWPARRRLASALAVLGAALLVAGCDTLGYYYQSIGGHLGVMAQAQPIDDAIATANGAHDARLAQRLTLAREIRDYASR ELKLPDNGSYRRYANLHRPYVVWSVFATPELSMDLRKWCFPIVGCITYRGYYDQKAADHYALGLRRDGLEAYVAGIPAYS TLGYFDDPLLNTFVYLPEGELARLIFHELAHQVVYVRNDTAFNESFATAVETAGVERWLAQEGSPEVRASYQIYDKRRRQ FRTMLLGARDQLVELYHSPLDDDAKRQGKARIFDELRQTYANLKKDEWGGYSGYDRWFEQPLTNAHLAAVATYQQWVPAF TALLAQCDGDWDRFYAAARKIGDLPPAERDAALRKLAPPATEVKPLTALRATDAGSQTSATSQGQ
Sequences:
>Translated_385_residues MIRWPARRRLASALAVLGAALLVAGCDTLGYYYQSIGGHLGVMAQAQPIDDAIATANGAHDARLAQRLTLAREIRDYASR ELKLPDNGSYRRYANLHRPYVVWSVFATPELSMDLRKWCFPIVGCITYRGYYDQKAADHYALGLRRDGLEAYVAGIPAYS TLGYFDDPLLNTFVYLPEGELARLIFHELAHQVVYVRNDTAFNESFATAVETAGVERWLAQEGSPEVRASYQIYDKRRRQ FRTMLLGARDQLVELYHSPLDDDAKRQGKARIFDELRQTYANLKKDEWGGYSGYDRWFEQPLTNAHLAAVATYQQWVPAF TALLAQCDGDWDRFYAAARKIGDLPPAERDAALRKLAPPATEVKPLTALRATDAGSQTSATSQGQ >Mature_385_residues MIRWPARRRLASALAVLGAALLVAGCDTLGYYYQSIGGHLGVMAQAQPIDDAIATANGAHDARLAQRLTLAREIRDYASR ELKLPDNGSYRRYANLHRPYVVWSVFATPELSMDLRKWCFPIVGCITYRGYYDQKAADHYALGLRRDGLEAYVAGIPAYS TLGYFDDPLLNTFVYLPEGELARLIFHELAHQVVYVRNDTAFNESFATAVETAGVERWLAQEGSPEVRASYQIYDKRRRQ FRTMLLGARDQLVELYHSPLDDDAKRQGKARIFDELRQTYANLKKDEWGGYSGYDRWFEQPLTNAHLAAVATYQQWVPAF TALLAQCDGDWDRFYAAARKIGDLPPAERDAALRKLAPPATEVKPLTALRATDAGSQTSATSQGQ
Specific function: Unknown
COG id: COG4324
COG function: function code R; Predicted aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43258; Mature: 43258
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRWPARRRLASALAVLGAALLVAGCDTLGYYYQSIGGHLGVMAQAQPIDDAIATANGAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCH DARLAQRLTLAREIRDYASRELKLPDNGSYRRYANLHRPYVVWSVFATPELSMDLRKWCF HHHHHHHHHHHHHHHHHHHCEECCCCCCCCHHHHHCCCCEEEEEEECCCCCCHHHHHHHH PIVGCITYRGYYDQKAADHYALGLRRDGLEAYVAGIPAYSTLGYFDDPLLNTFVYLPEGE HHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHCCCCCCHHHHHEEECCCCH LARLIFHELAHQVVYVRNDTAFNESFATAVETAGVERWLAQEGSPEVRASYQIYDKRRRQ HHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH FRTMLLGARDQLVELYHSPLDDDAKRQGKARIFDELRQTYANLKKDEWGGYSGYDRWFEQ HHHHHHCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHC PLTNAHLAAVATYQQWVPAFTALLAQCDGDWDRFYAAARKIGDLPPAERDAALRKLAPPA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC TEVKPLTALRATDAGSQTSATSQGQ CCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIRWPARRRLASALAVLGAALLVAGCDTLGYYYQSIGGHLGVMAQAQPIDDAIATANGAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCH DARLAQRLTLAREIRDYASRELKLPDNGSYRRYANLHRPYVVWSVFATPELSMDLRKWCF HHHHHHHHHHHHHHHHHHHCEECCCCCCCCHHHHHCCCCEEEEEEECCCCCCHHHHHHHH PIVGCITYRGYYDQKAADHYALGLRRDGLEAYVAGIPAYSTLGYFDDPLLNTFVYLPEGE HHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHCCCCCCHHHHHEEECCCCH LARLIFHELAHQVVYVRNDTAFNESFATAVETAGVERWLAQEGSPEVRASYQIYDKRRRQ HHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH FRTMLLGARDQLVELYHSPLDDDAKRQGKARIFDELRQTYANLKKDEWGGYSGYDRWFEQ HHHHHHCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHC PLTNAHLAAVATYQQWVPAFTALLAQCDGDWDRFYAAARKIGDLPPAERDAALRKLAPPA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC TEVKPLTALRATDAGSQTSATSQGQ CCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA