Click here to switch to the map view.

The map label for this gene is 94311951

Identifier: 94311951

GI number: 94311951

Start: 3278999

End: 3279388

Strand: Reverse

Name: 94311951

Synonym: Rmet_3019

Alternate gene names: NA

Gene position: 3279388-3278999 (Counterclockwise)

Preceding gene: 94311952

Following gene: 94311950

Centisome position: 83.49

GC content: 69.74

Gene sequence:

>390_bases
ATGTCGTCGCGCGTGCAGTGCGAGCGCATCCGCGCTGCACTTCGCGCTGCCTCCGGCGCAGCCGTCCCACGTGCAGGCGT
CTTGCCTCGAACACGGCTGGCCTGCGGCCATTGCCGTGTTCGCCGGTGCGCTGGCTGCTGGTGCAGCCTTGCCACCGGGC
CGCAGTTGCCGGGATCGAGAACCTGGGGGACAGGGGGAGGCAAATGCGGAAGGCAAGACAAAAGGGGGCGGCACCTGTCG
GCCCGCAAAGCCAGTCTGCACGTGGGGGGGCGAGGCACGCAGCGGCTTTGCCGCCGTGCCGCTTGGGGCGTGAGGCACGC
ACCGATACAGGCATGTCCGCGTGCTTCGCACGCCCGGACACGCCAGAGTTTGCAGGGAGCGCAGGCATGA

Upstream 100 bases:

>100_bases
GGCGTTGCGCGCCCCGTCTGGCTGGAGTCGCGCCCATGATGGCCACCGATTCGCTGCGCATCATCGTGCTATCGGGCGTG
TCGTTCTGCTGGCCGTTGTC

Downstream 100 bases:

>100_bases
CCAACCGCCGCGACGATGATTTCCGCATCCGCCCCAGCGCACCGAAGAACCGGGGCCAGGGCTTCGTATCCAAGGTGCTC
CAGCAGGCAGGCAAGGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSSRVQCERIRAALRAASGAAVPRAGVLPRTRLACGHCRVRRCAGCWCSLATGPQLPGSRTWGTGGGKCGRQDKRGRHLS
ARKASLHVGGRGTQRLCRRAAWGVRHAPIQACPRASHARTRQSLQGAQA

Sequences:

>Translated_129_residues
MSSRVQCERIRAALRAASGAAVPRAGVLPRTRLACGHCRVRRCAGCWCSLATGPQLPGSRTWGTGGGKCGRQDKRGRHLS
ARKASLHVGGRGTQRLCRRAAWGVRHAPIQACPRASHARTRQSLQGAQA
>Mature_128_residues
SSRVQCERIRAALRAASGAAVPRAGVLPRTRLACGHCRVRRCAGCWCSLATGPQLPGSRTWGTGGGKCGRQDKRGRHLSA
RKASLHVGGRGTQRLCRRAAWGVRHAPIQACPRASHARTRQSLQGAQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13772; Mature: 13641

Theoretical pI: Translated: 12.47; Mature: 12.47

Prosite motif: PS51162 THYROGLOBULIN_1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRVQCERIRAALRAASGAAVPRAGVLPRTRLACGHCRVRRCAGCWCSLATGPQLPGSR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TWGTGGGKCGRQDKRGRHLSARKASLHVGGRGTQRLCRRAAWGVRHAPIQACPRASHART
CCCCCCCCCCCCCCCCCCCCCHHCEEEECCCCHHHHHHHHHCCCCCCCHHHCCCCHHHHH
RQSLQGAQA
HHHHHCCCC
>Mature Secondary Structure 
SSRVQCERIRAALRAASGAAVPRAGVLPRTRLACGHCRVRRCAGCWCSLATGPQLPGSR
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TWGTGGGKCGRQDKRGRHLSARKASLHVGGRGTQRLCRRAAWGVRHAPIQACPRASHART
CCCCCCCCCCCCCCCCCCCCCHHCEEEECCCCHHHHHHHHHCCCCCCCHHHCCCCHHHHH
RQSLQGAQA
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA