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The map label for this gene is lrgA [C]

Identifier: 94311862

GI number: 94311862

Start: 3187010

End: 3187396

Strand: Direct

Name: lrgA [C]

Synonym: Rmet_2930

Alternate gene names: 94311862

Gene position: 3187010-3187396 (Clockwise)

Preceding gene: 94311861

Following gene: 94311863

Centisome position: 81.13

GC content: 64.34

Gene sequence:

>387_bases
ATGCTTCAGACGTTTGCCATCCTGCTGGTCTTTCAGACCGTGGGCGAGGTGATCAGCTACGCGCTGCACCTGCCCGTGCC
GGGTCCCGTGATCGGCATGCTCCTGCTGTTCGGCTGGCTGGTCTTCGACAACCGGTTGCTGCCCGTCGTCCAGAACTCCG
CGAATGAACTGCTCAAGCACCTGTCGCTGCTGTTCGTGCCGGCCGGCGTCGGCATCATGGTGCACGCCAACCGAATCGGC
AGCGAATGGCTCCCCATCGTCATCGCATTGGTGGTTTCCACCTGGGTGGCCATCGCGGTCACGGCGCTGGTCACGCGCGC
GCTGATGCGCAAGCCTCCTGCCGACACTCCTGTCGACACGTCGGCGGACACGGGAGCACAGCCATGA

Upstream 100 bases:

>100_bases
GGCGAGGGGAGCAGGAAGCCAACGGCAGCACTGACGTCCGGCTTGCACGCATCTTGTACGGGAGTACCATGTCGGCACAT
TTCGTCTCCCTACGCGCCCC

Downstream 100 bases:

>100_bases
TGTCGCCACGCCTGAACGAAATCTGGGTCTACCTGGCAGCGAGTCCGCTGATCGGGCTCACCGCCACGTTGATCGCCTAC
GTGTTCGCGTTCCGCATCTA

Product: effector of murein hydrolase LrgA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MLQTFAILLVFQTVGEVISYALHLPVPGPVIGMLLLFGWLVFDNRLLPVVQNSANELLKHLSLLFVPAGVGIMVHANRIG
SEWLPIVIALVVSTWVAIAVTALVTRALMRKPPADTPVDTSADTGAQP

Sequences:

>Translated_128_residues
MLQTFAILLVFQTVGEVISYALHLPVPGPVIGMLLLFGWLVFDNRLLPVVQNSANELLKHLSLLFVPAGVGIMVHANRIG
SEWLPIVIALVVSTWVAIAVTALVTRALMRKPPADTPVDTSADTGAQP
>Mature_128_residues
MLQTFAILLVFQTVGEVISYALHLPVPGPVIGMLLLFGWLVFDNRLLPVVQNSANELLKHLSLLFVPAGVGIMVHANRIG
SEWLPIVIALVVSTWVAIAVTALVTRALMRKPPADTPVDTSADTGAQP

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 13746; Mature: 13746

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTFAILLVFQTVGEVISYALHLPVPGPVIGMLLLFGWLVFDNRLLPVVQNSANELLKH
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHH
LSLLFVPAGVGIMVHANRIGSEWLPIVIALVVSTWVAIAVTALVTRALMRKPPADTPVDT
HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SADTGAQP
CCCCCCCC
>Mature Secondary Structure
MLQTFAILLVFQTVGEVISYALHLPVPGPVIGMLLLFGWLVFDNRLLPVVQNSANELLKH
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHH
LSLLFVPAGVGIMVHANRIGSEWLPIVIALVVSTWVAIAVTALVTRALMRKPPADTPVDT
HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SADTGAQP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA