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The map label for this gene is ychA [C]

Identifier: 94311838

GI number: 94311838

Start: 3160156

End: 3161004

Strand: Direct

Name: ychA [C]

Synonym: Rmet_2906

Alternate gene names: 94311838

Gene position: 3160156-3161004 (Clockwise)

Preceding gene: 94311837

Following gene: 94311840

Centisome position: 80.45

GC content: 62.31

Gene sequence:

>849_bases
ATGACCTCCACGAAAGTCCTGGACTACTTCGCCAGCCTCGTGGCCGACGACGACGCGATCCCGCTCACCGAGACCGCGCT
GGCGATCGCCCAGGACGCCTATCCTGACCTGGACCTGCAAGCCGAACTGGCAGCCCTGGATGTTCTGGCCCTGCGCCTGA
AGCGCCGGATCGCGGAGGGAACAGCGGCCATCCAGCGCCTGCGCCTGCTCAATCATTTCTTCTATCGCGATCTCGGCTTC
GGCCCCAACGCGAACGACTACTACGATCCGGACAACTCATATCTGAACATGGTGCTCAAGCAGCGCCGGGGTATTCCGAT
CTCGCTGGCCATCCTCTACATGGAACTCGGCCAACAGATCGGCCTGCCGCTCAAGGGTGTTGCCTTCCCCAGCCACTTTC
TGGTTCGCATGACGATTCCGGCGGGCGAGGTTGTGCTCGACCCGCTGACTGGCGAGACGCTTTCGAAGGAACAGTTGCAG
GAAATGCTCGACCCCTACCTCGAGCGCGAGGGGATCACTAATTCGAGCGAAGTGCCGCTCGGCCTGTTTCTGCAAACGGC
CAGCCATCGCGAGATCATCGCGCGGATGCTACGCAACTTGAAGGCGATCTATTTGCAGGAGTCACGCTGGCAGCGGCTGC
TGGCGGTGCAGAACCGCCTGGTGATCCTGCTGCCGGACTCGATCGAGGAAGTACGCGACCGGGGGCTGGCGTATGCCAAC
CTGGAATGCTTCCGCCCGGCACTGGAGGATCTGGAAGCCTATGTCCAGGCCCGCCCGGATGCGGCCGACTCCACGCAGAT
TCGCGATCGGATGCCAGCCTTGCGGATGATGAGCCGCAGCCTCAACTAA

Upstream 100 bases:

>100_bases
TGCCTGGTACTTGCGGCGACGGTCTACTTCGGTACACTGTGGCTCATGGGCCTGCGCTACTCCTCCTTCCGGCGCCGCGC
GGGCTAGTCAGGAACCCGCC

Downstream 100 bases:

>100_bases
CGGCTGCTGGCCCATCCGGCCCTGCTGCGCTCAGGAAGCGCGCGTATCGCGCGCCTTGCCGCGCACCAACTTCCACAACC
CGCCGAGCACCAGTGGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTSTKVLDYFASLVADDDAIPLTETALAIAQDAYPDLDLQAELAALDVLALRLKRRIAEGTAAIQRLRLLNHFFYRDLGF
GPNANDYYDPDNSYLNMVLKQRRGIPISLAILYMELGQQIGLPLKGVAFPSHFLVRMTIPAGEVVLDPLTGETLSKEQLQ
EMLDPYLEREGITNSSEVPLGLFLQTASHREIIARMLRNLKAIYLQESRWQRLLAVQNRLVILLPDSIEEVRDRGLAYAN
LECFRPALEDLEAYVQARPDAADSTQIRDRMPALRMMSRSLN

Sequences:

>Translated_282_residues
MTSTKVLDYFASLVADDDAIPLTETALAIAQDAYPDLDLQAELAALDVLALRLKRRIAEGTAAIQRLRLLNHFFYRDLGF
GPNANDYYDPDNSYLNMVLKQRRGIPISLAILYMELGQQIGLPLKGVAFPSHFLVRMTIPAGEVVLDPLTGETLSKEQLQ
EMLDPYLEREGITNSSEVPLGLFLQTASHREIIARMLRNLKAIYLQESRWQRLLAVQNRLVILLPDSIEEVRDRGLAYAN
LECFRPALEDLEAYVQARPDAADSTQIRDRMPALRMMSRSLN
>Mature_281_residues
TSTKVLDYFASLVADDDAIPLTETALAIAQDAYPDLDLQAELAALDVLALRLKRRIAEGTAAIQRLRLLNHFFYRDLGFG
PNANDYYDPDNSYLNMVLKQRRGIPISLAILYMELGQQIGLPLKGVAFPSHFLVRMTIPAGEVVLDPLTGETLSKEQLQE
MLDPYLEREGITNSSEVPLGLFLQTASHREIIARMLRNLKAIYLQESRWQRLLAVQNRLVILLPDSIEEVRDRGLAYANL
ECFRPALEDLEAYVQARPDAADSTQIRDRMPALRMMSRSLN

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306502, Length=83, Percent_Identity=44.578313253012, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI16306500, Length=83, Percent_Identity=44.578313253012, Blast_Score=75, Evalue=6e-14,
Organism=Escherichia coli, GI1787465, Length=256, Percent_Identity=34.375, Blast_Score=110, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31860; Mature: 31729

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTKVLDYFASLVADDDAIPLTETALAIAQDAYPDLDLQAELAALDVLALRLKRRIAEG
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TAAIQRLRLLNHFFYRDLGFGPNANDYYDPDNSYLNMVLKQRRGIPISLAILYMELGQQI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GLPLKGVAFPSHFLVRMTIPAGEVVLDPLTGETLSKEQLQEMLDPYLEREGITNSSEVPL
CCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
GLFLQTASHREIIARMLRNLKAIYLQESRWQRLLAVQNRLVILLPDSIEEVRDRGLAYAN
HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHCCCEEEC
LECFRPALEDLEAYVQARPDAADSTQIRDRMPALRMMSRSLN
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSTKVLDYFASLVADDDAIPLTETALAIAQDAYPDLDLQAELAALDVLALRLKRRIAEG
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TAAIQRLRLLNHFFYRDLGFGPNANDYYDPDNSYLNMVLKQRRGIPISLAILYMELGQQI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GLPLKGVAFPSHFLVRMTIPAGEVVLDPLTGETLSKEQLQEMLDPYLEREGITNSSEVPL
CCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
GLFLQTASHREIIARMLRNLKAIYLQESRWQRLLAVQNRLVILLPDSIEEVRDRGLAYAN
HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHCCCEEEC
LECFRPALEDLEAYVQARPDAADSTQIRDRMPALRMMSRSLN
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]