Definition Cupriavidus metallidurans CH34 chromosome, complete genome.
Accession NC_007973
Length 3,928,089

Click here to switch to the map view.

The map label for this gene is yajQ [C]

Identifier: 94311831

GI number: 94311831

Start: 3153997

End: 3154482

Strand: Reverse

Name: yajQ [C]

Synonym: Rmet_2899

Alternate gene names: 94311831

Gene position: 3154482-3153997 (Counterclockwise)

Preceding gene: 94311833

Following gene: 94311827

Centisome position: 80.31

GC content: 58.02

Gene sequence:

>486_bases
ATGCCGTCGTTTGACGTAGTGTGTGAAGCCAATATGGTCGAAGTGAAGAACGCCGTGGAGCAGGCCAACAAGGAAATCTC
CACGCGTTTCGACTTCAAGGGTTCCGATGCCCGGGTCGAGCAGAAGGAGGGTGAGCTGACCGCCTTTGCCGATGACGATT
TCAAGCTGGATCAGGTCAAGGACGTCCTGATCAACAAGATGGCCAAGCGCAACGTGGACGTGCGCTTCCTGGACTACGGC
AAGGTCGAGAAGATCAGCGGCGACAAGGTCAAGCAGGTCATCACGATCAAGAAGGGCGTGACCGGTGATCTGGCCAAGAA
GATCGTGCGCATGATCAAGGACAGCAAGATCAAGGTCCAGGGCAGCATCCAGGGCGATGCGGTGCGCGTATCGGGCACCA
AGCGCGACGATCTGCAGGCGGTGATCGCCATGCTGCGCAAGGACGCCAACGAGGCGCCCCTCGACTTCAACAACTTCCGC
GACTAA

Upstream 100 bases:

>100_bases
AATGGCCTCCCCGGACTGAGAGGCAGGCCCGATTATACGTAACCGTTACGGACCGGCCGCCGCTAAGTGCCAGCGGCCAT
GCAATACCAGGAGAATTGAA

Downstream 100 bases:

>100_bases
GCGCGTCGCAGCCCGCAACCACCCAACTCGCGGGCTGCCTTACAGCGCTATTGAGGCTACTTCGGCTGAGGTAGTCCGCC
GATCTTCGCGCCCGGCTTGA

Product: putative nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPSFDVVCEANMVEVKNAVEQANKEISTRFDFKGSDARVEQKEGELTAFADDDFKLDQVKDVLINKMAKRNVDVRFLDYG
KVEKISGDKVKQVITIKKGVTGDLAKKIVRMIKDSKIKVQGSIQGDAVRVSGTKRDDLQAVIAMLRKDANEAPLDFNNFR
D

Sequences:

>Translated_161_residues
MPSFDVVCEANMVEVKNAVEQANKEISTRFDFKGSDARVEQKEGELTAFADDDFKLDQVKDVLINKMAKRNVDVRFLDYG
KVEKISGDKVKQVITIKKGVTGDLAKKIVRMIKDSKIKVQGSIQGDAVRVSGTKRDDLQAVIAMLRKDANEAPLDFNNFR
D
>Mature_160_residues
PSFDVVCEANMVEVKNAVEQANKEISTRFDFKGSDARVEQKEGELTAFADDDFKLDQVKDVLINKMAKRNVDVRFLDYGK
VEKISGDKVKQVITIKKGVTGDLAKKIVRMIKDSKIKVQGSIQGDAVRVSGTKRDDLQAVIAMLRKDANEAPLDFNNFRD

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family [H]

Homologues:

Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=42.9447852760736, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007551 [H]

Pfam domain/function: PF04461 DUF520 [H]

EC number: NA

Molecular weight: Translated: 18041; Mature: 17910

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFDVVCEANMVEVKNAVEQANKEISTRFDFKGSDARVEQKEGELTAFADDDFKLDQVK
CCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEECCCCCHHHHH
DVLINKMAKRNVDVRFLDYGKVEKISGDKVKQVITIKKGVTGDLAKKIVRMIKDSKIKVQ
HHHHHHHHHCCCCEEEECCCCEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEE
GSIQGDAVRVSGTKRDDLQAVIAMLRKDANEAPLDFNNFRD
ECCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSFDVVCEANMVEVKNAVEQANKEISTRFDFKGSDARVEQKEGELTAFADDDFKLDQVK
CCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEECCCCCHHHHH
DVLINKMAKRNVDVRFLDYGKVEKISGDKVKQVITIKKGVTGDLAKKIVRMIKDSKIKVQ
HHHHHHHHHCCCCEEEECCCCEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEE
GSIQGDAVRVSGTKRDDLQAVIAMLRKDANEAPLDFNNFRD
ECCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA