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The map label for this gene is 94311752

Identifier: 94311752

GI number: 94311752

Start: 3067829

End: 3068998

Strand: Direct

Name: 94311752

Synonym: Rmet_2820

Alternate gene names: NA

Gene position: 3067829-3068998 (Clockwise)

Preceding gene: 94311751

Following gene: 94311753

Centisome position: 78.1

GC content: 65.64

Gene sequence:

>1170_bases
ATGCGTCTGCGCAAGCTGCTGCTGCCAGTGATGTCCATGTTGTCTTTTGGTGTCGCCACGGGGTCGGCCCATGCCGATAT
CCGCGTCGGCGTCGACCTGTCGACCACAGGCCCCGCCGCCGCGATCGGCATCCCGTCGCGCAACACGGTGCAGATGTGGC
CGCAGACGCTTGGCGGCCAGCGCGCGCAGTACATCGTGCTCGACGACGCCACTGACCCGGCTGCTGCCGTGCGCAACGTG
CGCAAGCTCATCGCCGAGGACAAGGTCGATGTGATCGTCGGCCCCAACATCACGCCAAACGCGATTGCCGCGCTCGACGC
CATTGCCGAGAGCGGGACGCCGATGGTGGCGCTGGCCGCCTCGGCTTCAATCATCGAGCCGGCCGGCGACGCACGGCGCC
GCTGGGCATTCAAGATGCCGCAGAACGACGCCCTGATGGCGACGATCCTGACCGAGCACATGACCAACCAGGGCGTGAAG
ACGGTGGGCTTCATCGGCTTCAACGATGCCTACGGCGAAAGTTGGTGGCGCGAGTTTTCGAAGATGGCCGAGATCCGTCG
CCTGCGCGTGGTGGGCAACGAGCGCTTCGGGCGCACCGATACGTCGGTGACCGGGCAGATACTGAAGCTGATGTCGGCGA
ATCCGGATGCCATCCTGATTGCGGGCTCGGGCACGCCGGCAGTGCTGCCTCAGAAGACACTCGGCGAGCGCGGCTACAAG
GGCCGCATCTACCAGACCCACGGCATTGCGTCGTGGGACTTCCTGCGCGTGGGTGGCAAGGACGTCGAGGGCACACTCTT
TCCGACCGGGCCAGTGGTGGTAGCGCGGCAGTTGCCCGATAGCCATCCGGTGAAGAAGGTGGCGCTCGATTTCGTCACGC
GCTATGAAGCGAAGTACGGCCCGGATACGGTGACGCAGTTTGCTGGCGATGCATGGGGCGCATGGCTGCTGCTCGACGAT
GCCAGCCGACGCGCGCTCAAGAGCGGCGCGCAGCCAGGCACGCCAGCGTTCCGCGCCGCGCTGCGTGACGCGATCGAATC
GACGCACAACCTGACCGTGCCCAATGGCGTGCTCAACCTGAGCGCGCAGGATCATCAAGGTTTCGACCAGCGTGCCCGCG
TGATGGGCGTGGTGCGCAATGGCAAGTTCGCCTACGCAGGCGACAAGTAA

Upstream 100 bases:

>100_bases
CTGGCTGCGAAGTAAGCCACATAGTCGACCCCGAAGCCGTCCCCAAAGCCGTCTCCGAAGTCGTCCTCTTCACGATCCTG
TCTCGTCCGGGAGTTCGCCC

Downstream 100 bases:

>100_bases
GACAAGTTCTAGGAAGCATTCATGACCACCGTAGCATTTATTGGCCTTGGCGCGATGGGCGCGCCGATGGTGGGCCACCT
GATCCGCGCCGGCCATACCG

Product: HAAT family ABC transporter periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MRLRKLLLPVMSMLSFGVATGSAHADIRVGVDLSTTGPAAAIGIPSRNTVQMWPQTLGGQRAQYIVLDDATDPAAAVRNV
RKLIAEDKVDVIVGPNITPNAIAALDAIAESGTPMVALAASASIIEPAGDARRRWAFKMPQNDALMATILTEHMTNQGVK
TVGFIGFNDAYGESWWREFSKMAEIRRLRVVGNERFGRTDTSVTGQILKLMSANPDAILIAGSGTPAVLPQKTLGERGYK
GRIYQTHGIASWDFLRVGGKDVEGTLFPTGPVVVARQLPDSHPVKKVALDFVTRYEAKYGPDTVTQFAGDAWGAWLLLDD
ASRRALKSGAQPGTPAFRAALRDAIESTHNLTVPNGVLNLSAQDHQGFDQRARVMGVVRNGKFAYAGDK

Sequences:

>Translated_389_residues
MRLRKLLLPVMSMLSFGVATGSAHADIRVGVDLSTTGPAAAIGIPSRNTVQMWPQTLGGQRAQYIVLDDATDPAAAVRNV
RKLIAEDKVDVIVGPNITPNAIAALDAIAESGTPMVALAASASIIEPAGDARRRWAFKMPQNDALMATILTEHMTNQGVK
TVGFIGFNDAYGESWWREFSKMAEIRRLRVVGNERFGRTDTSVTGQILKLMSANPDAILIAGSGTPAVLPQKTLGERGYK
GRIYQTHGIASWDFLRVGGKDVEGTLFPTGPVVVARQLPDSHPVKKVALDFVTRYEAKYGPDTVTQFAGDAWGAWLLLDD
ASRRALKSGAQPGTPAFRAALRDAIESTHNLTVPNGVLNLSAQDHQGFDQRARVMGVVRNGKFAYAGDK
>Mature_389_residues
MRLRKLLLPVMSMLSFGVATGSAHADIRVGVDLSTTGPAAAIGIPSRNTVQMWPQTLGGQRAQYIVLDDATDPAAAVRNV
RKLIAEDKVDVIVGPNITPNAIAALDAIAESGTPMVALAASASIIEPAGDARRRWAFKMPQNDALMATILTEHMTNQGVK
TVGFIGFNDAYGESWWREFSKMAEIRRLRVVGNERFGRTDTSVTGQILKLMSANPDAILIAGSGTPAVLPQKTLGERGYK
GRIYQTHGIASWDFLRVGGKDVEGTLFPTGPVVVARQLPDSHPVKKVALDFVTRYEAKYGPDTVTQFAGDAWGAWLLLDD
ASRRALKSGAQPGTPAFRAALRDAIESTHNLTVPNGVLNLSAQDHQGFDQRARVMGVVRNGKFAYAGDK

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 41830; Mature: 41830

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRKLLLPVMSMLSFGVATGSAHADIRVGVDLSTTGPAAAIGIPSRNTVQMWPQTLGGQ
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCHHEECHHHCCCC
RAQYIVLDDATDPAAAVRNVRKLIAEDKVDVIVGPNITPNAIAALDAIAESGTPMVALAA
CEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
SASIIEPAGDARRRWAFKMPQNDALMATILTEHMTNQGVKTVGFIGFNDAYGESWWREFS
CCCCCCCCCCHHHCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHH
KMAEIRRLRVVGNERFGRTDTSVTGQILKLMSANPDAILIAGSGTPAVLPQKTLGERGYK
HHHHHHHHHEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCCCC
GRIYQTHGIASWDFLRVGGKDVEGTLFPTGPVVVARQLPDSHPVKKVALDFVTRYEAKYG
CCEEEECCCCCEEEEEECCCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCC
PDTVTQFAGDAWGAWLLLDDASRRALKSGAQPGTPAFRAALRDAIESTHNLTVPNGVLNL
CHHHHHHCCCCCEEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCCEEEC
SAQDHQGFDQRARVMGVVRNGKFAYAGDK
CCCCCCCHHHHHHHHEEEECCEEEECCCC
>Mature Secondary Structure
MRLRKLLLPVMSMLSFGVATGSAHADIRVGVDLSTTGPAAAIGIPSRNTVQMWPQTLGGQ
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCHHEECHHHCCCC
RAQYIVLDDATDPAAAVRNVRKLIAEDKVDVIVGPNITPNAIAALDAIAESGTPMVALAA
CEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
SASIIEPAGDARRRWAFKMPQNDALMATILTEHMTNQGVKTVGFIGFNDAYGESWWREFS
CCCCCCCCCCHHHCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHH
KMAEIRRLRVVGNERFGRTDTSVTGQILKLMSANPDAILIAGSGTPAVLPQKTLGERGYK
HHHHHHHHHEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCCCC
GRIYQTHGIASWDFLRVGGKDVEGTLFPTGPVVVARQLPDSHPVKKVALDFVTRYEAKYG
CCEEEECCCCCEEEEEECCCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCC
PDTVTQFAGDAWGAWLLLDDASRRALKSGAQPGTPAFRAALRDAIESTHNLTVPNGVLNL
CHHHHHHCCCCCEEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCCEEEC
SAQDHQGFDQRARVMGVVRNGKFAYAGDK
CCCCCCCHHHHHHHHEEEECCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]