| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is hemK1
Identifier: 94311751
GI number: 94311751
Start: 3066604
End: 3067743
Strand: Direct
Name: hemK1
Synonym: Rmet_2819
Alternate gene names: NA
Gene position: 3066604-3067743 (Clockwise)
Preceding gene: 94311750
Following gene: 94311752
Centisome position: 78.07
GC content: 68.95
Gene sequence:
>1140_bases ATGTCAGTCACTGATTCCCTCCCGACGATCCACTGGACCGAAGACGGCGCCGAGCGCAGCGCGATGTGGCGTTCCGAAGC CGGCCTGCCCCCGCCGAAACGCGTGGTGATCGCCGACGACCAGACGCCGGCCGATACCGCGTTCCGTCTGGCCAGTGAAG GCACCGCCCTGCTCTGGCGCGGCGACTTCCAGAATGCGCGCCAGTTACTGCAGGCGATGGCGCGGCGCGTCGATCGCAAG CCGAAGAAGGCGCCAAAGCCGGCCGCCAGCCTCACCGAGGCGTTCCACAAGCACCGGCTCGCCCAGTCGCAGCGGGCCCG CACGCTGGGCATGTTGCTGCTGCCGTTCGAGGCCGGCCACGTGGTGCCGCTGCGCCGCGCGCCCGATGTGCATGAAGCCT GCGAGCAGGTCTACGGCCAATCCGACACGCCGTACGTGGCGTCGATGCGTGAACTGCTCGGCCTGATCGGCGCATTCGAA TGGCGCAAGAAAGGCATCGAGATCCCGGCGCTCGGCGAGCGCATCCATCCGTGGTACGGCGTGTTTTCGCCTGTGCGCGG CGAGTACATCGACCTCGTGGCGAAAGAACCGCTGCCATCGGGCACCCTGGCGTTCGACATTGGCACCGGCACCGGCGTGC TCGCGGCGCTGCTGGCCCAGCGTGGCGTGAAACGCGTGGTAGGCACCGACCAGGACGCCCGCGCGCTCGGCAACGCCCGC GCCAACATCGAGCGGCTTGGACTGACGGGCGACGTCGAGATCATCGAAGCCGACCTGTTCCCCGAAGGCCGCGCGCCGCT CGTGGTCTGCAATCCACCGTGGGTACCCGCACGCCCGAGTTCGCCGATCGAGCACGCCGTGTTCGACCCGGACAGCCGGA TGCTGCGCGGCTTCCTGAACGGCTTGGCCGCGCATCTGACGCCGGATGGCCAGGGCTGGCTGATCCTGTCGGACTTTGCC GAGCATCTGGGCCTGCGCACGCGCGACGAACTGCTTGGCTGGATCGATGCGGCGGGGCTCAAGGTGCTTGGCCGCTCTGA CATCCGCCCGCGCCACCCGAAGGCCGCCGATGCCGACGACCCGCTCTTCGCCGCGCGCAAGGCCGAGATGACGTCGCTGT GGCGACTGGCTGCGAAGTAA
Upstream 100 bases:
>100_bases CTCGCCGACCCTGAACCGCAAGCTGGTGGAACAGGCGATGTCGGGCGACCACGAAGCCTACGAACTCTGAGCATCGCTCG AAGCACCCTGCCCTATATAT
Downstream 100 bases:
>100_bases GCCACATAGTCGACCCCGAAGCCGTCCCCAAAGCCGTCTCCGAAGTCGTCCTCTTCACGATCCTGTCTCGTCCGGGAGTT CGCCCATGCGTCTGCGCAAG
Product: methylase of polypeptide chain release factors
Products: NA
Alternate protein names: Methyltransferase; Methylase Of Polypeptide Chain Release Factors; Methyltransferase Domain Protein; Adenine Specific DNA-Methyltransferase; Polypeptide Chain Release Factor Methylase; ElmF Protein; Methyltransferase SmallRibosomal; RNA Methyltransferase; Methylase Of Polypeptide Chain Release Factors Protein; Methyltransferase Small Domain-Containing Protein; 50S Ribosomal Methyltransferase PrmA Family Protein; Methylase
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MSVTDSLPTIHWTEDGAERSAMWRSEAGLPPPKRVVIADDQTPADTAFRLASEGTALLWRGDFQNARQLLQAMARRVDRK PKKAPKPAASLTEAFHKHRLAQSQRARTLGMLLLPFEAGHVVPLRRAPDVHEACEQVYGQSDTPYVASMRELLGLIGAFE WRKKGIEIPALGERIHPWYGVFSPVRGEYIDLVAKEPLPSGTLAFDIGTGTGVLAALLAQRGVKRVVGTDQDARALGNAR ANIERLGLTGDVEIIEADLFPEGRAPLVVCNPPWVPARPSSPIEHAVFDPDSRMLRGFLNGLAAHLTPDGQGWLILSDFA EHLGLRTRDELLGWIDAAGLKVLGRSDIRPRHPKAADADDPLFAARKAEMTSLWRLAAK
Sequences:
>Translated_379_residues MSVTDSLPTIHWTEDGAERSAMWRSEAGLPPPKRVVIADDQTPADTAFRLASEGTALLWRGDFQNARQLLQAMARRVDRK PKKAPKPAASLTEAFHKHRLAQSQRARTLGMLLLPFEAGHVVPLRRAPDVHEACEQVYGQSDTPYVASMRELLGLIGAFE WRKKGIEIPALGERIHPWYGVFSPVRGEYIDLVAKEPLPSGTLAFDIGTGTGVLAALLAQRGVKRVVGTDQDARALGNAR ANIERLGLTGDVEIIEADLFPEGRAPLVVCNPPWVPARPSSPIEHAVFDPDSRMLRGFLNGLAAHLTPDGQGWLILSDFA EHLGLRTRDELLGWIDAAGLKVLGRSDIRPRHPKAADADDPLFAARKAEMTSLWRLAAK >Mature_378_residues SVTDSLPTIHWTEDGAERSAMWRSEAGLPPPKRVVIADDQTPADTAFRLASEGTALLWRGDFQNARQLLQAMARRVDRKP KKAPKPAASLTEAFHKHRLAQSQRARTLGMLLLPFEAGHVVPLRRAPDVHEACEQVYGQSDTPYVASMRELLGLIGAFEW RKKGIEIPALGERIHPWYGVFSPVRGEYIDLVAKEPLPSGTLAFDIGTGTGVLAALLAQRGVKRVVGTDQDARALGNARA NIERLGLTGDVEIIEADLFPEGRAPLVVCNPPWVPARPSSPIEHAVFDPDSRMLRGFLNGLAAHLTPDGQGWLILSDFAE HLGLRTRDELLGWIDAAGLKVLGRSDIRPRHPKAADADDPLFAARKAEMTSLWRLAAK
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41536; Mature: 41405
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTDSLPTIHWTEDGAERSAMWRSEAGLPPPKRVVIADDQTPADTAFRLASEGTALLWR CCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEE GDFQNARQLLQAMARRVDRKPKKAPKPAASLTEAFHKHRLAQSQRARTLGMLLLPFEAGH CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCC VVPLRRAPDVHEACEQVYGQSDTPYVASMRELLGLIGAFEWRKKGIEIPALGERIHPWYG EEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH VFSPVRGEYIDLVAKEPLPSGTLAFDIGTGTGVLAALLAQRGVKRVVGTDQDARALGNAR CCCCCCCHHHHHEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ANIERLGLTGDVEIIEADLFPEGRAPLVVCNPPWVPARPSSPIEHAVFDPDSRMLRGFLN CCHHHCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCHHEECCHHHHHHHHHH GLAAHLTPDGQGWLILSDFAEHLGLRTRDELLGWIDAAGLKVLGRSDIRPRHPKAADADD HHHHHCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHCHHEECCCCCCCCCCCCCCCCC PLFAARKAEMTSLWRLAAK CHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVTDSLPTIHWTEDGAERSAMWRSEAGLPPPKRVVIADDQTPADTAFRLASEGTALLWR CCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEE GDFQNARQLLQAMARRVDRKPKKAPKPAASLTEAFHKHRLAQSQRARTLGMLLLPFEAGH CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCC VVPLRRAPDVHEACEQVYGQSDTPYVASMRELLGLIGAFEWRKKGIEIPALGERIHPWYG EEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH VFSPVRGEYIDLVAKEPLPSGTLAFDIGTGTGVLAALLAQRGVKRVVGTDQDARALGNAR CCCCCCCHHHHHEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ANIERLGLTGDVEIIEADLFPEGRAPLVVCNPPWVPARPSSPIEHAVFDPDSRMLRGFLN CCHHHCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCHHEECCHHHHHHHHHH GLAAHLTPDGQGWLILSDFAEHLGLRTRDELLGWIDAAGLKVLGRSDIRPRHPKAADADD HHHHHCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHCHHEECCCCCCCCCCCCCCCCC PLFAARKAEMTSLWRLAAK CHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA