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The map label for this gene is 94311684

Identifier: 94311684

GI number: 94311684

Start: 2991852

End: 2992394

Strand: Direct

Name: 94311684

Synonym: Rmet_2752

Alternate gene names: NA

Gene position: 2991852-2992394 (Clockwise)

Preceding gene: 335055628

Following gene: 94311685

Centisome position: 76.17

GC content: 57.46

Gene sequence:

>543_bases
ATGAATTACTTGCTTGGTCTGTCACGACAGATCGACAGGTTGAATCAGCATACGGGCAGGCTTGCAAACATCATGATCCT
GCTGTCGTGTCTGATCAGCGCAGGTAACGCCCTGCTCCGCTACGGCTTCAACCTCAGCGACAACTGGCCACTGGAGTTGC
AGTGGTACATGTTTGCCATTGCCGTGATGTTCGGTGCGTCGTACACGTTCCAGCGCAATGAGCACGTGCGTGTGGATCTG
ATCTACGGCAACGTGTCCGAGCGCGCACAGCACTGGATCGACATCTTCGGCATCGTCGTCTTCCTGCTGCCTTCCACGAT
CCTGTTCACGTGGCTGTCGTGGGAATCGCTGTTCCTGCCTTCGTGGCGCATCCTCGAGCAATCGGGCAATTCGGGCGGCC
TGCCCCGTTATCCGATCAAGCTCGTCGTGCCCATCGGTTTTGCCCTGCTCACGCTGCAGGGGATTTCCGAACTGATCAAG
CGCTTCGCCGCCCTGCAGGGCCTGCTGCGCATCGAATCGAAATACGAAAGGCCGGTGCAATAA

Upstream 100 bases:

>100_bases
AAGAAAACCCACGCCATGTCCGCCTGTTAGGACAATCCCCTAGCGCCCTTACAAATTGTGACAGATACACTATTTGGCGC
AAAAACCGGGGAGACAACCC

Downstream 100 bases:

>100_bases
TGATTCCATTGGAATATATGCCGCCGCTCATGTTCGGCGGCTTGGTGGTATTTATGCTGATCGGGTTCCCGGTCGCATTC
TCGCTGTCGGCCGTGGGTCT

Product: Tripartite ATP-independent C4-dicarboxylate transport system, DctQ subunit

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; TRAP-Type Transporter Small Permease Component; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; Mannitol Transporter; TRAP Transporter Small Transmembrane Protein; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease Component Of C4 Dicarboxylate Transporter; Permease; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Family Transporter DctQ Subunit; Small Permease Of TRAP-Type Transporter; Trap Dicarboxylate Transporter Dctm Subunit; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter; TRAP-Type Large Permease Component; Transporter DctQ Related Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP-Type Transport System Small Permease Component; TRAP Transporter Small Subunit; C4-Dicarboxylate Transporter Permease; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; Tripartite ATP-Independent Periplasmic; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MNYLLGLSRQIDRLNQHTGRLANIMILLSCLISAGNALLRYGFNLSDNWPLELQWYMFAIAVMFGASYTFQRNEHVRVDL
IYGNVSERAQHWIDIFGIVVFLLPSTILFTWLSWESLFLPSWRILEQSGNSGGLPRYPIKLVVPIGFALLTLQGISELIK
RFAALQGLLRIESKYERPVQ

Sequences:

>Translated_180_residues
MNYLLGLSRQIDRLNQHTGRLANIMILLSCLISAGNALLRYGFNLSDNWPLELQWYMFAIAVMFGASYTFQRNEHVRVDL
IYGNVSERAQHWIDIFGIVVFLLPSTILFTWLSWESLFLPSWRILEQSGNSGGLPRYPIKLVVPIGFALLTLQGISELIK
RFAALQGLLRIESKYERPVQ
>Mature_180_residues
MNYLLGLSRQIDRLNQHTGRLANIMILLSCLISAGNALLRYGFNLSDNWPLELQWYMFAIAVMFGASYTFQRNEHVRVDL
IYGNVSERAQHWIDIFGIVVFLLPSTILFTWLSWESLFLPSWRILEQSGNSGGLPRYPIKLVVPIGFALLTLQGISELIK
RFAALQGLLRIESKYERPVQ

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20676; Mature: 20676

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYLLGLSRQIDRLNQHTGRLANIMILLSCLISAGNALLRYGFNLSDNWPLELQWYMFAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHH
AVMFGASYTFQRNEHVRVDLIYGNVSERAQHWIDIFGIVVFLLPSTILFTWLSWESLFLP
HHHHCCCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SWRILEQSGNSGGLPRYPIKLVVPIGFALLTLQGISELIKRFAALQGLLRIESKYERPVQ
CHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNYLLGLSRQIDRLNQHTGRLANIMILLSCLISAGNALLRYGFNLSDNWPLELQWYMFAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHH
AVMFGASYTFQRNEHVRVDLIYGNVSERAQHWIDIFGIVVFLLPSTILFTWLSWESLFLP
HHHHCCCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SWRILEQSGNSGGLPRYPIKLVVPIGFALLTLQGISELIKRFAALQGLLRIESKYERPVQ
CHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA