Click here to switch to the map view.

The map label for this gene is 94311619

Identifier: 94311619

GI number: 94311619

Start: 2919389

End: 2919913

Strand: Direct

Name: 94311619

Synonym: Rmet_2687

Alternate gene names: NA

Gene position: 2919389-2919913 (Clockwise)

Preceding gene: 94311618

Following gene: 94311620

Centisome position: 74.32

GC content: 69.14

Gene sequence:

>525_bases
ATGCGAACCACAGGCCACGCGTCCCGAAACGCCAAACGCGGCGCCACCTTGCCCGAACTGCTGATCTCGTTGGCCATCAG
CGCGATCCTGGCCATCGCCGCGTGGCCGGTGCTTCGCAACCTGACTGCGGAGCAGACGGTGGCCCATGCCGCGGACCGGC
TGGCCGCGTCACTGGCGCTGGCACGCACAATCGCGGCCAGTCGCCGCGTTGAAGTGCGTATCGGCCCCCTGGCAGGCGCC
CACACGCTGGATGGCGGCTGGCAGTTGGACAGTGACATGGAGCCTTCGCTCGCGGTCGTCAGAGCCAGCGACCCGTGCCT
GCGGATCACGCTCCGCAGCACGGCGGGCCCTGCCGGCGCACAAAGCCTGCGCTTGACACCTGTGGGATACTCACGGTCTG
AGCAAGGCGGCTTTCTGGCCGCCACGTTCCAGTTGCGCTGCCACCGCGCGCAGCGACAGGTCCGGCTCGGTGCCCAGGGG
CGCATCCGGATCTGCCGGCCCGGCATCGATGTCGATTGCGACTGA

Upstream 100 bases:

>100_bases
GACAAAGCGTGTGGCACGCTGGTCCTGCGCAGCAATGGCGAGTGGCTCTCCATGCCCACGGCGGACGCCGCCGCCATTCC
GTTGCCTTGGGAGTGCTGAC

Downstream 100 bases:

>100_bases
CCGGACCGGATTCCCGACAAACCCTTTGGCCAGAATCCCACGCCATGTTTTCCGCCGCTGACTACACCGCCATGGAACAG
GCCCTCGCGCTCGCCGCGCG

Product: putative type IV pili-like protein

Products: NA

Alternate protein names: Pilus Assembly Protein Fim; TYPE 4 FIMBRIAL PILIN FimT-Related TRANSMEMBRANE PROTEIN; Type IV Pilus Assembly Protein FimT

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRTTGHASRNAKRGATLPELLISLAISAILAIAAWPVLRNLTAEQTVAHAADRLAASLALARTIAASRRVEVRIGPLAGA
HTLDGGWQLDSDMEPSLAVVRASDPCLRITLRSTAGPAGAQSLRLTPVGYSRSEQGGFLAATFQLRCHRAQRQVRLGAQG
RIRICRPGIDVDCD

Sequences:

>Translated_174_residues
MRTTGHASRNAKRGATLPELLISLAISAILAIAAWPVLRNLTAEQTVAHAADRLAASLALARTIAASRRVEVRIGPLAGA
HTLDGGWQLDSDMEPSLAVVRASDPCLRITLRSTAGPAGAQSLRLTPVGYSRSEQGGFLAATFQLRCHRAQRQVRLGAQG
RIRICRPGIDVDCD
>Mature_174_residues
MRTTGHASRNAKRGATLPELLISLAISAILAIAAWPVLRNLTAEQTVAHAADRLAASLALARTIAASRRVEVRIGPLAGA
HTLDGGWQLDSDMEPSLAVVRASDPCLRITLRSTAGPAGAQSLRLTPVGYSRSEQGGFLAATFQLRCHRAQRQVRLGAQG
RIRICRPGIDVDCD

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18494; Mature: 18494

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTGHASRNAKRGATLPELLISLAISAILAIAAWPVLRNLTAEQTVAHAADRLAASLAL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ARTIAASRRVEVRIGPLAGAHTLDGGWQLDSDMEPSLAVVRASDPCLRITLRSTAGPAGA
HHHHHHCCEEEEEECCCCCCEECCCCEEECCCCCCCEEEEECCCCEEEEEEECCCCCCCC
QSLRLTPVGYSRSEQGGFLAATFQLRCHRAQRQVRLGAQGRIRICRPGIDVDCD
CEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MRTTGHASRNAKRGATLPELLISLAISAILAIAAWPVLRNLTAEQTVAHAADRLAASLAL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ARTIAASRRVEVRIGPLAGAHTLDGGWQLDSDMEPSLAVVRASDPCLRITLRSTAGPAGA
HHHHHHCCEEEEEECCCCCCEECCCCEEECCCCCCCEEEEECCCCEEEEEEECCCCCCCC
QSLRLTPVGYSRSEQGGFLAATFQLRCHRAQRQVRLGAQGRIRICRPGIDVDCD
CEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA